RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 TMEM241Q24JQ0 296 aa9.02□□□□□ -0.97
PRKDC-203ENST00000432581 NAT8BQ9UHF3 227 aa9.02□□□□□ -0.97
PRKDC-203ENST00000432581 IGHV3OR16-9A0A0B4J2B5 98 aa9.01□□□□□ -0.97
PRKDC-203ENST00000432581 LINC00862A6NCI5 91 aa9.01□□□□□ -0.97
PRKDC-203ENST00000432581 MRPL51Q4U2R6 128 aaKnown RBP9.01□□□□□ -0.97
PRKDC-203ENST00000432581 FAM104BQ5XKR9 115 aa9.01□□□□□ -0.97
PRKDC-203ENST00000432581 SPANXA1Q9NS26 97 aa9.01□□□□□ -0.97
PRKDC-203ENST00000432581 TRBV24-1A0A075B6N3 115 aa9□□□□□ -0.97
PRKDC-203ENST00000432581 FAM168BA1KXE4 195 aa8.99□□□□□ -0.97
PRKDC-203ENST00000432581 CKS2P33552 79 aa8.99□□□□□ -0.97
PRKDC-203ENST00000432581 RPL39P62891 51 aaKnown RBP8.99□□□□□ -0.97
PRKDC-203ENST00000432581 HBBP68871 147 aa8.99□□□□□ -0.97
PRKDC-203ENST00000432581 MRPS36P82909 103 aaKnown RBP8.99□□□□□ -0.97
PRKDC-203ENST00000432581 FAM19A5Q7Z5A7 132 aaPredicted RBP8.99□□□□□ -0.97
PRKDC-203ENST00000432581 A0A1B0GW15 77 aa8.98□□□□□ -0.97
PRKDC-203ENST00000432581 IFITM10A6NMD0 228 aa8.98□□□□□ -0.97
PRKDC-203ENST00000432581 SRP19P09132 144 aaKnown RBP8.98□□□□□ -0.97
PRKDC-203ENST00000432581 GAGE2EQ4V326 116 aa8.98□□□□□ -0.97
PRKDC-203ENST00000432581 C10orf25Q5T742 122 aa8.98□□□□□ -0.97
PRKDC-203ENST00000432581 UNQ6190/PRO20217Q6UXQ8 127 aa8.98□□□□□ -0.97
PRKDC-203ENST00000432581 KRTAP11-1Q8IUC1 163 aa8.98□□□□□ -0.97
PRKDC-203ENST00000432581 FAM104AQ969W3 186 aa8.98□□□□□ -0.97
PRKDC-203ENST00000432581 SMDT1Q9H4I9 107 aa8.98□□□□□ -0.97
PRKDC-203ENST00000432581 C6orf48Q9UBA6 75 aa8.98□□□□□ -0.97
PRKDC-203ENST00000432581 GAGE2DQ9UEU5 116 aa8.98□□□□□ -0.97
PRKDC-203ENST00000432581 RPL13AP40429 203 aaKnown RBP8.97□□□□□ -0.97
PRKDC-203ENST00000432581 IFITM2Q01629 132 aa8.97□□□□□ -0.97
PRKDC-203ENST00000432581 FAM74A3Q4VXF1 159 aa8.97□□□□□ -0.97
PRKDC-203ENST00000432581 SMIM2Q9BVW6 85 aa8.97□□□□□ -0.97
PRKDC-203ENST00000432581 TGIF2-C20orf24A0A0A6YYL0 155 aa8.96□□□□□ -0.98
PRKDC-203ENST00000432581 M0QXV9 152 aa8.96□□□□□ -0.98
PRKDC-203ENST00000432581 TNFRSF6BO95407 300 aa8.96□□□□□ -0.98
PRKDC-203ENST00000432581 KRTAP1-4P0C5Y4 121 aa8.96□□□□□ -0.98
PRKDC-203ENST00000432581 UBE2D1P51668 147 aa8.96□□□□□ -0.98
PRKDC-203ENST00000432581 UBE2BP63146 152 aa8.96□□□□□ -0.98
PRKDC-203ENST00000432581 SMIM27A0A1W2PRY6 76 aa8.95□□□□□ -0.98
PRKDC-203ENST00000432581 TRBV30A0A0K0K1B3 111 aa8.94□□□□□ -0.98
PRKDC-203ENST00000432581 S100A8P05109 93 aa8.94□□□□□ -0.98
PRKDC-203ENST00000432581 RPL23P62829 140 aaKnown RBP8.94□□□□□ -0.98
PRKDC-203ENST00000432581 KRTAP7-1Q8IUC3 87 aa8.94□□□□□ -0.98
PRKDC-203ENST00000432581 D6R8Y8 96 aa8.93□□□□□ -0.98
PRKDC-203ENST00000432581 NDUFC2-KCTD14E9PQ53 114 aa8.93□□□□□ -0.98
PRKDC-203ENST00000432581 F8W036 122 aa8.93□□□□□ -0.98
PRKDC-203ENST00000432581 KIAA0087Q14695 138 aa8.93□□□□□ -0.98
PRKDC-203ENST00000432581 ADIRFQ15847 76 aa8.93□□□□□ -0.98
PRKDC-203ENST00000432581 PRR4Q16378 134 aa8.93□□□□□ -0.98
PRKDC-203ENST00000432581 CARHSP1Q9Y2V2 147 aaKnown RBP8.93□□□□□ -0.98
PRKDC-203ENST00000432581 PPBPP02775 128 aa8.92□□□□□ -0.98
PRKDC-203ENST00000432581 IFI27P40305 119 aaPredicted RBP8.92□□□□□ -0.98
PRKDC-203ENST00000432581 PACRGQ96M98 296 aaPredicted RBP8.92□□□□□ -0.98
PRKDC-203ENST00000432581 NAT8Q9UHE5 227 aa8.92□□□□□ -0.98
PRKDC-203ENST00000432581 NPYP01303 97 aa8.91□□□□□ -0.98
PRKDC-203ENST00000432581 LINC00242Q5T6M2 205 aa8.91□□□□□ -0.98
PRKDC-203ENST00000432581 PYGO1Q9Y3Y4 419 aa8.91□□□□□ -0.98
PRKDC-203ENST00000432581 A0A0U1RQV1 116 aa8.9□□□□□ -0.98
PRKDC-203ENST00000432581 RAB5AP20339 215 aa8.9□□□□□ -0.98
PRKDC-203ENST00000432581 C9orf129Q5T035 196 aaKnown RBP8.9□□□□□ -0.98
PRKDC-203ENST00000432581 LINC01561Q8N1V8 128 aa8.9□□□□□ -0.98
PRKDC-203ENST00000432581 MUC2Q02817 5179 aa8.9□□□□□ -0.99
PRKDC-203ENST00000432581 ZNF861PO60384 105 aa8.89□□□□□ -0.99
PRKDC-203ENST00000432581 MRPL54Q6P161 138 aaKnown RBP8.89□□□□□ -0.99
PRKDC-203ENST00000432581 C2orf82Q6UX34 121 aa8.89□□□□□ -0.99
PRKDC-203ENST00000432581 TMEM141Q96I45 108 aa8.89□□□□□ -0.99
PRKDC-203ENST00000432581 IGLV4-3A0A075B6K6 122 aa8.88□□□□□ -0.99
PRKDC-203ENST00000432581 A0A1B0GXF2 115 aa8.88□□□□□ -0.99
PRKDC-203ENST00000432581 ORMDL3Q8N138 153 aa8.88□□□□□ -0.99
PRKDC-203ENST00000432581 NUPR1O60356 82 aa8.87□□□□□ -0.99
PRKDC-203ENST00000432581 TEX43Q6ZNM6 134 aa8.87□□□□□ -0.99
PRKDC-203ENST00000432581 C2orf88Q9BSF0 95 aa8.87□□□□□ -0.99
PRKDC-203ENST00000432581 PRSS2P07478 247 aa8.86□□□□□ -0.99
PRKDC-203ENST00000432581 TMEM136Q6ZRR5 245 aa8.86□□□□□ -0.99
PRKDC-203ENST00000432581 C9JQL5 133 aa8.85□□□□□ -0.99
PRKDC-203ENST00000432581 CKS1BP61024 79 aa8.85□□□□□ -0.99
PRKDC-203ENST00000432581 LBHQ53QV2 105 aaPredicted RBP8.85□□□□□ -0.99
PRKDC-203ENST00000432581 ATP5L2Q7Z4Y8 100 aa8.85□□□□□ -0.99
PRKDC-203ENST00000432581 PRELID3AQ96N28 172 aa8.85□□□□□ -0.99
PRKDC-203ENST00000432581 PEA15Q15121 130 aa8.84□□□□□ -0.99
PRKDC-203ENST00000432581 CLLU1Q5K131 121 aa8.84□□□□□ -0.99
PRKDC-203ENST00000432581 Q6ZN92 141 aa8.84□□□□□ -0.99
PRKDC-203ENST00000432581 C22orf24Q9Y442 160 aa8.84□□□□□ -0.99
PRKDC-203ENST00000432581 PRSS47A8MTI9 375 aa8.83□□□□□ -1
PRKDC-203ENST00000432581 NDUFA5Q16718 116 aa8.83□□□□□ -1
PRKDC-203ENST00000432581 LAMTOR2Q9Y2Q5 125 aa8.83□□□□□ -1
PRKDC-203ENST00000432581 RAB14P61106 215 aa8.82□□□□□ -1
PRKDC-203ENST00000432581 C6orf226Q5I0X4 101 aa8.82□□□□□ -1
PRKDC-203ENST00000432581 Q8IZM0 81 aa8.82□□□□□ -1
PRKDC-203ENST00000432581 LINC00469Q8N7U9 141 aa8.82□□□□□ -1
PRKDC-203ENST00000432581 CTDSP1Q9GZU7 261 aa8.82□□□□□ -1
PRKDC-203ENST00000432581 VCX2Q9H322 139 aa8.82□□□□□ -1
PRKDC-203ENST00000432581 TOMM7Q9P0U1 55 aa8.82□□□□□ -1
PRKDC-203ENST00000432581 CYSLTR1Q9Y271 337 aa8.82□□□□□ -1
PRKDC-203ENST00000432581 TSPAN13O95857 204 aa8.81□□□□□ -1
PRKDC-203ENST00000432581 NPSP0C0P6 89 aa8.81□□□□□ -1
PRKDC-203ENST00000432581 RPL28P46779 137 aaKnown RBP8.81□□□□□ -1
PRKDC-203ENST00000432581 C2orf66Q6UXQ4 117 aa8.81□□□□□ -1
PRKDC-203ENST00000432581 AMELXQ99217 191 aa8.81□□□□□ -1
PRKDC-203ENST00000432581 MAP1LC3AQ9H492 121 aa8.81□□□□□ -1
PRKDC-203ENST00000432581 TP73-AS1Q9UF72 201 aa8.81□□□□□ -1
PRKDC-203ENST00000432581 LOC389332A0A1B0GUA5 103 aa8.8□□□□□ -1
PRKDC-203ENST00000432581 SRSF3P84103 164 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms