RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 BCORQ6W2J9 1755 aa1.37□□□□□ -2.19
CLK1-204ENST00000432425 NCOA6Q14686 2063 aaPredicted RBP1.37□□□□□ -2.19
CLK1-204ENST00000432425 TRAV23DV6A0A075B6W5 121 aa1.36□□□□□ -2.19
CLK1-204ENST00000432425 IGLV3-32A0A0A0MS00 114 aa1.36□□□□□ -2.19
CLK1-204ENST00000432425 CEBPZOSA8MTT3 80 aa1.36□□□□□ -2.19
CLK1-204ENST00000432425 HMGN4O00479 90 aa1.36□□□□□ -2.19
CLK1-204ENST00000432425 COX6CP09669 75 aa1.36□□□□□ -2.19
CLK1-204ENST00000432425 PLGLAQ15195 96 aa1.36□□□□□ -2.19
CLK1-204ENST00000432425 PSMG4Q5JS54 123 aa1.36□□□□□ -2.19
CLK1-204ENST00000432425 FDCSPQ8NFU4 85 aa1.36□□□□□ -2.19
CLK1-204ENST00000432425 CRCT1Q9UGL9 99 aa1.36□□□□□ -2.19
CLK1-204ENST00000432425 KDM6BO15054 1643 aa1.36□□□□□ -2.19
CLK1-204ENST00000432425 E9PCH4 1651 aa1.36□□□□□ -2.19
CLK1-204ENST00000432425 PRRC2BQ5JSZ5 2229 aaKnown RBP1.36□□□□□ -2.19
CLK1-204ENST00000432425 TJP1Q07157 1748 aa1.36□□□□□ -2.19
CLK1-204ENST00000432425 PHRF1Q9P1Y6 1649 aaKnown RBP1.36□□□□□ -2.19
CLK1-204ENST00000432425 SLIT2O94813 1529 aa1.36□□□□□ -2.19
CLK1-204ENST00000432425 KIAA0586Q9BVV6 1533 aa1.36□□□□□ -2.19
CLK1-204ENST00000432425 TRBV6-7A0A0A0MS04 114 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 TRBV10-1A0A0K0K1A3 114 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 A0A1W2PNN7 141 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 SNRPGP15A8MWD9 76 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 PSCAO43653 123 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 IGHV3-33P01772 117 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 Q6JHZ5 121 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 R4GN34 69 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 SDK1Q7Z5N4 2213 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 PAPPA2Q9BXP8 1791 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 DLEC1Q9Y238 1755 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 RICTORQ6R327 1708 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 NHSQ6T4R5 1651 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 USP32Q8NFA0 1604 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 CICQ96RK0 1608 aaPredicted RBP1.35□□□□□ -2.19
CLK1-204ENST00000432425 MAST1Q9Y2H9 1570 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 ZFHX2Q9C0A1 2572 aaPredicted RBP1.35□□□□□ -2.19
CLK1-204ENST00000432425 EHBP1L1Q8N3D4 1523 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 CD163L1Q9NR16 1453 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 MUC6Q6W4X9 2439 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 IGKV3-7A0A075B6H7 116 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 LEPROTL1O95214 131 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 IGLV6-57P01721 117 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 ARMS2P0C7Q2 107 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 C2orf82Q6UX34 121 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 PRR15LQ9BU68 103 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 UBE2D4Q9Y2X8 147 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 SNURFQ9Y675 71 aa1.35□□□□□ -2.19
CLK1-204ENST00000432425 FMN2Q9NZ56 1722 aa1.34□□□□□ -2.19
CLK1-204ENST00000432425 C5P01031 1676 aa1.34□□□□□ -2.19
CLK1-204ENST00000432425 GCC2Q8IWJ2 1684 aa1.34□□□□□ -2.19
CLK1-204ENST00000432425 LRP6O75581 1613 aa1.34□□□□□ -2.19
CLK1-204ENST00000432425 ADGRB2O60241 1585 aa1.34□□□□□ -2.19
CLK1-204ENST00000432425 IQGAP2Q13576 1575 aa1.34□□□□□ -2.19
CLK1-204ENST00000432425 ZMYM4Q5VZL5 1548 aa1.34□□□□□ -2.19
CLK1-204ENST00000432425 TRBV6-8A0A0A6YYG3 113 aa1.34□□□□□ -2.19
CLK1-204ENST00000432425 LOC101927531A0A1B0GV80 90 aa1.34□□□□□ -2.19
CLK1-204ENST00000432425 NUPR2A6NF83 97 aa1.34□□□□□ -2.19
CLK1-204ENST00000432425 M0R3E3 92 aa1.34□□□□□ -2.19
CLK1-204ENST00000432425 GDF5OSQ5U4N7 250 aa1.34□□□□□ -2.19
CLK1-204ENST00000432425 MRPL36Q9P0J6 103 aaKnown RBP1.34□□□□□ -2.19
CLK1-204ENST00000432425 MRC1P22897 1456 aa1.34□□□□□ -2.2
CLK1-204ENST00000432425 ANKRD50Q9ULJ7 1429 aa1.33□□□□□ -2.2
CLK1-204ENST00000432425 FREM1Q5H8C1 2179 aa1.33□□□□□ -2.2
CLK1-204ENST00000432425 NRAPQ86VF7 1730 aa1.33□□□□□ -2.2
CLK1-204ENST00000432425 A0A087WVE0 104 aa1.33□□□□□ -2.2
CLK1-204ENST00000432425 A0A0D9SFI3 127 aa1.33□□□□□ -2.2
CLK1-204ENST00000432425 PPP1R17O96001 155 aa1.33□□□□□ -2.2
CLK1-204ENST00000432425 CTSGP08311 255 aa1.33□□□□□ -2.2
CLK1-204ENST00000432425 IFI27P40305 119 aaPredicted RBP1.33□□□□□ -2.2
CLK1-204ENST00000432425 CNBPP62633 177 aaKnown RBP1.33□□□□□ -2.2
CLK1-204ENST00000432425 SPAG11BQ08648 103 aa1.33□□□□□ -2.2
CLK1-204ENST00000432425 C1orf137Q5JT78 98 aa1.33□□□□□ -2.2
CLK1-204ENST00000432425 SPAG11AQ6PDA7 123 aa1.33□□□□□ -2.2
CLK1-204ENST00000432425 NDUFA11Q86Y39 141 aa1.33□□□□□ -2.2
CLK1-204ENST00000432425 SPAG17Q6Q759 2223 aa1.33□□□□□ -2.2
CLK1-204ENST00000432425 ATP7BP35670 1465 aa1.33□□□□□ -2.2
CLK1-204ENST00000432425 NHSL1Q5SYE7 1610 aa1.33□□□□□ -2.2
CLK1-204ENST00000432425 A0A0J9YY99 117 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 D6R8Y8 96 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 IGHV3-30P01768 117 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 IGHV3-30-5P0DP03 117 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 PDE6HQ13956 83 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 NCBP2-AS2Q69YL0 99 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 HCP5Q6MZN7 132 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 MUSTN1Q8IVN3 82 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 DEFB107AQ8IZN7 70 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 PPP1R1CQ8WVI7 109 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 DMAC1Q96GE9 116 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 ORMDL1Q9P0S3 153 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 PRO2289Q9P1D8 64 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 LENEPQ9Y5L5 61 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 CPS1P31327 1500 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 C3P01024 1663 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 INTS1Q8N201 2190 aaKnown RBP1.32□□□□□ -2.2
CLK1-204ENST00000432425 MED13LQ71F56 2210 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 TRBV7-4A0A0J9YYF1 115 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 J3QRE1 110 aa1.32□□□□□ -2.2
CLK1-204ENST00000432425 SAA2P0DJI9 122 aaPredicted RBP1.32□□□□□ -2.2
CLK1-204ENST00000432425 ELOF1P60002 83 aaKnown RBP1.32□□□□□ -2.2
CLK1-204ENST00000432425 SSBP1Q04837 148 aaKnown RBP1.32□□□□□ -2.2
CLK1-204ENST00000432425 ATXN8Q156A1 80 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms