RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 LCA10Q71F78 164 aa1.04□□□□□ -2.24
HMGB1P27-201ENST00000431429 S100A7AQ86SG5 101 aa1.04□□□□□ -2.24
HMGB1P27-201ENST00000431429 FAM24BQ8N5W8 94 aa1.04□□□□□ -2.24
HMGB1P27-201ENST00000431429 OR8D4Q8NGM9 314 aa1.04□□□□□ -2.24
HMGB1P27-201ENST00000431429 BORCS5Q969J3 196 aa1.04□□□□□ -2.24
HMGB1P27-201ENST00000431429 LSM10Q969L4 123 aaKnown RBP1.04□□□□□ -2.24
HMGB1P27-201ENST00000431429 TSC22D3Q99576 134 aa1.04□□□□□ -2.24
HMGB1P27-201ENST00000431429 MRPL32Q9BYC8 188 aaKnown RBP1.04□□□□□ -2.24
HMGB1P27-201ENST00000431429 TTTY10Q9BZA0 68 aa1.04□□□□□ -2.24
HMGB1P27-201ENST00000431429 MIXL1Q9H2W2 232 aa1.04□□□□□ -2.24
HMGB1P27-201ENST00000431429 LINC00846Q9NV44 126 aa1.04□□□□□ -2.24
HMGB1P27-201ENST00000431429 FAT1Q14517 4588 aa1.04□□□□□ -2.24
HMGB1P27-201ENST00000431429 PKHD1L1Q86WI1 4243 aa1.04□□□□□ -2.24
HMGB1P27-201ENST00000431429 TRBV6-7A0A0A0MS04 114 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 TRAV4A0A0B4J268 109 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 TRBV6-5A0A0K0K1A5 114 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 IGLC7A0M8Q6 106 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 E7EUB6 86 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 J3QLW9 94 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 K7EIM0 57 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 IFNA7P01567 189 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 FABP1P07148 127 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 RNASE3P12724 160 aaKnown RBP1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 S100GP29377 79 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 CNBPP62633 177 aaKnown RBP1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 RHOBP62745 196 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 RPL19P84098 196 aaKnown RBP1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 CATR1Q13166 79 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 CCDC58Q4VC31 144 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 C10orf55Q5SWW7 151 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 DPPA3Q6W0C5 159 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 CLVS1Q8IUQ0 354 aaPredicted RBP1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 ACBD7Q8N6N7 88 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 OR51A4Q8NGJ6 313 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 OR10AC1Q8NH08 325 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 Q8TAT8 98 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 SLC35B3Q9H1N7 401 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 BANF2Q9H503 90 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 NDUFA4L2Q9NRX3 87 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 SLC39A9Q9NUM3 307 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 PRNDQ9UKY0 176 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 ARL2BPQ9Y2Y0 163 aa1.03□□□□□ -2.24
HMGB1P27-201ENST00000431429 A0A087WWC5 75 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 A0A0G2JND7 137 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 CRYM-AS1A6NIL9 109 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 SNRPGP15A8MWD9 76 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 I3L2K1 104 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 FXYD1O00168 92 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 TCL1BO95988 128 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 CFDP00746 253 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 SLC25A4P12235 298 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 CRYBA4P53673 196 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 YPEL3P61236 119 aaPredicted RBP1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 HSPE1P61604 102 aaKnown RBP1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 WT1-ASQ06250 92 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 LRP1Q07954 4544 aaKnown RBP1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 Q0VG73 95 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 MSMO1Q15800 293 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 KRTAP21-2Q3LI59 83 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 GDF5OSQ5U4N7 250 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 UNQ6190/PRO20217Q6UXQ8 127 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 C6orf201Q7Z4U5 140 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 BPIFA4PQ86YQ2 179 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 OR8I2Q8N0Y5 310 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 HIST3H2BBQ8N257 126 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 BTF3L4Q96K17 158 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 CCDC90BQ9GZT6 254 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 CST9LQ9H4G1 147 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 ENY2Q9NPA8 101 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 TAS2R4Q9NYW5 299 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 LINC00474Q9P2X8 69 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 CACFD1Q9UGQ2 172 aa1.02□□□□□ -2.25
HMGB1P27-201ENST00000431429 FAT3Q8TDW7 4589 aa1.01□□□□□ -2.25
HMGB1P27-201ENST00000431429 TRBV19A0A075B6N1 114 aa1.01□□□□□ -2.25
HMGB1P27-201ENST00000431429 TRGV1A0A0A0MS02 117 aa1.01□□□□□ -2.25
HMGB1P27-201ENST00000431429 A8MTW9 85 aa1.01□□□□□ -2.25
HMGB1P27-201ENST00000431429 M0R2Z0 102 aa1.01□□□□□ -2.25
HMGB1P27-201ENST00000431429 ATG12O94817 140 aa1.01□□□□□ -2.25
HMGB1P27-201ENST00000431429 OR10J4P0C629 311 aa1.01□□□□□ -2.25
HMGB1P27-201ENST00000431429 COX4I1P13073 169 aa1.01□□□□□ -2.25
HMGB1P27-201ENST00000431429 RNASE4P34096 147 aaKnown RBP1.01□□□□□ -2.25
HMGB1P27-201ENST00000431429 UBE2D1P51668 147 aa1.01□□□□□ -2.25
HMGB1P27-201ENST00000431429 SPINK13Q1W4C9 94 aa1.01□□□□□ -2.25
HMGB1P27-201ENST00000431429 WFDC10BQ8IUB3 73 aa1.01□□□□□ -2.25
HMGB1P27-201ENST00000431429 OR5A1Q8NGJ0 315 aa1.01□□□□□ -2.25
HMGB1P27-201ENST00000431429 ARHGAP5-AS1Q96IT6 56 aa1.01□□□□□ -2.25
HMGB1P27-201ENST00000431429 NAA38Q9BRA0 125 aaKnown RBP1.01□□□□□ -2.25
HMGB1P27-201ENST00000431429 PRADC1Q9BSG0 188 aa1.01□□□□□ -2.25
HMGB1P27-201ENST00000431429 PDCD10Q9BUL8 212 aa1.01□□□□□ -2.25
HMGB1P27-201ENST00000431429 SAR1AQ9NR31 198 aa1.01□□□□□ -2.25
HMGB1P27-201ENST00000431429 TAS2R8Q9NYW2 309 aa1.01□□□□□ -2.25
HMGB1P27-201ENST00000431429 PLAC8Q9NZF1 115 aa1.01□□□□□ -2.25
HMGB1P27-201ENST00000431429 TNXBP22105 4242 aa1.01□□□□□ -2.25
HMGB1P27-201ENST00000431429 TRAV12-2A0A075B6T6 113 aa1□□□□□ -2.25
HMGB1P27-201ENST00000431429 A0A087WX48 190 aa1□□□□□ -2.25
HMGB1P27-201ENST00000431429 G3V2T6 193 aa1□□□□□ -2.25
HMGB1P27-201ENST00000431429 GABARAPH6UMI1 98 aa1□□□□□ -2.25
HMGB1P27-201ENST00000431429 M0R2T5 61 aa1□□□□□ -2.25
HMGB1P27-201ENST00000431429 SPINK4O60575 86 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms