RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 REG3AQ06141 175 aa12.37□□□□□ -0.43
HMGN1-206ENST00000431390 PRR34Q9NV39 138 aa12.37□□□□□ -0.43
HMGN1-206ENST00000431390 IGKV3OR2-268A0A0C4DH90 116 aa12.36□□□□□ -0.43
HMGN1-206ENST00000431390 SIVA1O15304 175 aa12.36□□□□□ -0.43
HMGN1-206ENST00000431390 SS18Q15532 418 aa12.36□□□□□ -0.43
HMGN1-206ENST00000431390 KLK12Q9UKR0 248 aa12.36□□□□□ -0.43
HMGN1-206ENST00000431390 ANKRD39Q53RE8 183 aa12.35□□□□□ -0.43
HMGN1-206ENST00000431390 HERVK_113P61574 105 aa12.35□□□□□ -0.43
HMGN1-206ENST00000431390 COX6A2Q02221 97 aa12.35□□□□□ -0.43
HMGN1-206ENST00000431390 CLPSL2Q6UWE3 100 aa12.35□□□□□ -0.43
HMGN1-206ENST00000431390 TMEM223A0PJW6 202 aa12.34□□□□□ -0.43
HMGN1-206ENST00000431390 LINC00469Q8N7U9 141 aa12.34□□□□□ -0.43
HMGN1-206ENST00000431390 E9PLD3 99 aa12.33□□□□□ -0.44
HMGN1-206ENST00000431390 H3BRM9 83 aa12.33□□□□□ -0.44
HMGN1-206ENST00000431390 CRPP02741 224 aa12.33□□□□□ -0.44
HMGN1-206ENST00000431390 LINC00476Q8WZB0 136 aa12.33□□□□□ -0.44
HMGN1-206ENST00000431390 CDKN2A-AS1Q9UH64 79 aa12.33□□□□□ -0.44
HMGN1-206ENST00000431390 FRAS1Q86XX4 4008 aa12.32□□□□□ -0.44
HMGN1-206ENST00000431390 ENHOQ6UWT2 76 aa12.32□□□□□ -0.44
HMGN1-206ENST00000431390 UBE2DNLQ8IWF7 75 aa12.32□□□□□ -0.44
HMGN1-206ENST00000431390 TSTD3H0UI37 97 aa12.31□□□□□ -0.44
HMGN1-206ENST00000431390 Q9H8V8 135 aa12.31□□□□□ -0.44
HMGN1-206ENST00000431390 TRAV8-4A0A0B4J246 113 aa12.3□□□□□ -0.44
HMGN1-206ENST00000431390 IGHV3OR16-9A0A0B4J2B5 98 aa12.3□□□□□ -0.44
HMGN1-206ENST00000431390 MIAQ16674 131 aa12.3□□□□□ -0.44
HMGN1-206ENST00000431390 UBE2WQ96B02 151 aa12.3□□□□□ -0.44
HMGN1-206ENST00000431390 PRO1933Q9H354 126 aa12.3□□□□□ -0.44
HMGN1-206ENST00000431390 IGKV2D-26A0A0A0MRZ7 120 aa12.3□□□□□ -0.44
HMGN1-206ENST00000431390 LY6G6CO95867 125 aa12.3□□□□□ -0.44
HMGN1-206ENST00000431390 CHCHD10Q8WYQ3 142 aaPredicted RBP12.3□□□□□ -0.44
HMGN1-206ENST00000431390 K7EP13 123 aa12.29□□□□□ -0.44
HMGN1-206ENST00000431390 NMUP48645 174 aa12.29□□□□□ -0.44
HMGN1-206ENST00000431390 CD164L2Q6UWJ8 174 aa12.29□□□□□ -0.44
HMGN1-206ENST00000431390 C10orf126Q8N4M7 172 aa12.29□□□□□ -0.44
HMGN1-206ENST00000431390 COX8AP10176 69 aa12.28□□□□□ -0.44
HMGN1-206ENST00000431390 XCL1P47992 114 aa12.28□□□□□ -0.44
HMGN1-206ENST00000431390 IGHV1-58A0A0C4DH39 117 aa12.27□□□□□ -0.44
HMGN1-206ENST00000431390 LEPROTO15243 131 aa12.27□□□□□ -0.44
HMGN1-206ENST00000431390 C14orf144Q96I85 54 aa12.27□□□□□ -0.44
HMGN1-206ENST00000431390 IGLV10-54A0A075B6I4 117 aa12.26□□□□□ -0.45
HMGN1-206ENST00000431390 A0A087WZ39 114 aa12.26□□□□□ -0.45
HMGN1-206ENST00000431390 IBA57-AS1B1ANH7 110 aa12.26□□□□□ -0.45
HMGN1-206ENST00000431390 SPINK8P0C7L1 97 aa12.26□□□□□ -0.45
HMGN1-206ENST00000431390 LINC01561Q8N1V8 128 aa12.26□□□□□ -0.45
HMGN1-206ENST00000431390 SMIM1B2RUZ4 78 aa12.26□□□□□ -0.45
HMGN1-206ENST00000431390 PLEKHB2Q96CS7 222 aa12.26□□□□□ -0.45
HMGN1-206ENST00000431390 UQCR10Q9UDW1 63 aa12.26□□□□□ -0.45
HMGN1-206ENST00000431390 TRAV8-3A0A0A6YYJ7 113 aa12.25□□□□□ -0.45
HMGN1-206ENST00000431390 IGLV5-39A0A0G2JS06 123 aa12.25□□□□□ -0.45
HMGN1-206ENST00000431390 SLC25A34Q6PIV7 304 aa12.25□□□□□ -0.45
HMGN1-206ENST00000431390 MIEN1Q9BRT3 115 aa12.25□□□□□ -0.45
HMGN1-206ENST00000431390 HERC2O95714 4834 aa12.24□□□□□ -0.45
HMGN1-206ENST00000431390 IGHV3-64A0A075B6Q5 118 aa12.24□□□□□ -0.45
HMGN1-206ENST00000431390 J3QQQ9 107 aa12.24□□□□□ -0.45
HMGN1-206ENST00000431390 DLEU1O43261 78 aa12.24□□□□□ -0.45
HMGN1-206ENST00000431390 FOXI1Q12951 378 aa12.24□□□□□ -0.45
HMGN1-206ENST00000431390 PCP2Q8IVA1 136 aa12.24□□□□□ -0.45
HMGN1-206ENST00000431390 BOD1L2Q8IYS8 172 aa12.24□□□□□ -0.45
HMGN1-206ENST00000431390 C5orf38Q86SI9 138 aa12.23□□□□□ -0.45
HMGN1-206ENST00000431390 GAGE12HA6NDE8 117 aa12.22□□□□□ -0.45
HMGN1-206ENST00000431390 COX7A2LO14548 114 aa12.22□□□□□ -0.45
HMGN1-206ENST00000431390 LGALS3P17931 250 aaKnown RBP12.22□□□□□ -0.45
HMGN1-206ENST00000431390 TSPEAR-AS2P59090 65 aa12.22□□□□□ -0.45
HMGN1-206ENST00000431390 C1orf43Q9BWL3 253 aa12.22□□□□□ -0.45
HMGN1-206ENST00000431390 KMT2AQ03164 3969 aa12.21□□□□□ -0.45
HMGN1-206ENST00000431390 TTTY13Q9BZ97 58 aa12.21□□□□□ -0.46
HMGN1-206ENST00000431390 KRTAP26-1Q6PEX3 210 aa12.2□□□□□ -0.46
HMGN1-206ENST00000431390 MYMXA0A1B0GTQ4 84 aa12.19□□□□□ -0.46
HMGN1-206ENST00000431390 MAPKAPK5-AS1Q8N8E1 139 aa12.19□□□□□ -0.46
HMGN1-206ENST00000431390 RMI2Q96E14 147 aa12.19□□□□□ -0.46
HMGN1-206ENST00000431390 PCLOQ9Y6V0 5065 aa12.18□□□□□ -0.46
HMGN1-206ENST00000431390 ZNF815PA8K554 130 aa12.18□□□□□ -0.46
HMGN1-206ENST00000431390 MALP21145 153 aa12.18□□□□□ -0.46
HMGN1-206ENST00000431390 DDTP30046 118 aa12.18□□□□□ -0.46
HMGN1-206ENST00000431390 TTC32Q5I0X7 151 aa12.18□□□□□ -0.46
HMGN1-206ENST00000431390 Q9HAA7 133 aa12.18□□□□□ -0.46
HMGN1-206ENST00000431390 IGKV2D-24A0A075B6R9 120 aa12.18□□□□□ -0.46
HMGN1-206ENST00000431390 PCP4L1A6NKN8 68 aa12.18□□□□□ -0.46
HMGN1-206ENST00000431390 TP73-AS1Q9UF72 201 aa12.18□□□□□ -0.46
HMGN1-206ENST00000431390 APOMO95445 188 aa12.17□□□□□ -0.46
HMGN1-206ENST00000431390 COX7B2Q8TF08 81 aa12.17□□□□□ -0.46
HMGN1-206ENST00000431390 KRTAP1-5Q9BYS1 174 aa12.16□□□□□ -0.46
HMGN1-206ENST00000431390 NDUFA12Q9UI09 145 aa12.16□□□□□ -0.46
HMGN1-206ENST00000431390 NBDYA0A0U1RRE5 68 aa12.15□□□□□ -0.46
HMGN1-206ENST00000431390 HNRNPA3P51991 378 aaKnown RBP12.15□□□□□ -0.46
HMGN1-206ENST00000431390 COX11Q9Y6N1 276 aa12.15□□□□□ -0.46
HMGN1-206ENST00000431390 Q8IZM0 81 aa12.14□□□□□ -0.47
HMGN1-206ENST00000431390 DNAH10Q8IVF4 4471 aa12.14□□□□□ -0.47
HMGN1-206ENST00000431390 NDUFA1O15239 70 aa12.13□□□□□ -0.47
HMGN1-206ENST00000431390 C2orf91Q6ZV80 131 aa12.13□□□□□ -0.47
HMGN1-206ENST00000431390 ORAOV1Q8WV07 137 aa12.13□□□□□ -0.47
HMGN1-206ENST00000431390 TOMM7Q9P0U1 55 aa12.13□□□□□ -0.47
HMGN1-206ENST00000431390 HIGD1BQ9P298 99 aa12.13□□□□□ -0.47
HMGN1-206ENST00000431390 PRSS2P07478 247 aa12.12□□□□□ -0.47
HMGN1-206ENST00000431390 SFTA2Q6UW10 78 aa12.12□□□□□ -0.47
HMGN1-206ENST00000431390 SCGB1D4Q6XE38 83 aa12.12□□□□□ -0.47
HMGN1-206ENST00000431390 ZNF625Q96I27 306 aaPredicted RBP12.12□□□□□ -0.47
HMGN1-206ENST00000431390 TM2D2Q9BX73 214 aa12.12□□□□□ -0.47
HMGN1-206ENST00000431390 VPS13DQ5THJ4 4388 aa12.1□□□□□ -0.47
HMGN1-206ENST00000431390 HERV-K104P63124 156 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms