RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 SUMO2P61956 95 aaKnown RBP13.07□□□□□ -0.32
PTPRA-207ENST00000431048 AMN1Q8IY45 258 aa13.07□□□□□ -0.32
PTPRA-207ENST00000431048 TSPAN13O95857 204 aa13.06□□□□□ -0.32
PTPRA-207ENST00000431048 NRACQ8N912 160 aa13.06□□□□□ -0.32
PTPRA-207ENST00000431048 RGS21Q2M5E4 152 aa13.05□□□□□ -0.32
PTPRA-207ENST00000431048 HIGD1CA8MV81 97 aa13.04□□□□□ -0.32
PTPRA-207ENST00000431048 FAM104AQ969W3 186 aa13.04□□□□□ -0.32
PTPRA-207ENST00000431048 BATF3Q9NR55 127 aa13.04□□□□□ -0.32
PTPRA-207ENST00000431048 SMKR1H3BMG3 65 aa13.03□□□□□ -0.32
PTPRA-207ENST00000431048 PPP1R2P9O14990 202 aa13.03□□□□□ -0.32
PTPRA-207ENST00000431048 TMEM250H0YL14 139 aa13.02□□□□□ -0.33
PTPRA-207ENST00000431048 KIAA0087Q14695 138 aa13.02□□□□□ -0.33
PTPRA-207ENST00000431048 TRBV30A0A0K0K1B3 111 aa13□□□□□ -0.33
PTPRA-207ENST00000431048 MRPS36P82909 103 aaKnown RBP13□□□□□ -0.33
PTPRA-207ENST00000431048 C9orf129Q5T035 196 aaKnown RBP13□□□□□ -0.33
PTPRA-207ENST00000431048 NDUFC2-KCTD14E9PQ53 114 aa12.99□□□□□ -0.33
PTPRA-207ENST00000431048 TCAPO15273 167 aa12.99□□□□□ -0.33
PTPRA-207ENST00000431048 NUPR1O60356 82 aa12.99□□□□□ -0.33
PTPRA-207ENST00000431048 RPL32P62910 135 aaKnown RBP12.98□□□□□ -0.33
PTPRA-207ENST00000431048 RIGQ13278 110 aa12.98□□□□□ -0.33
PTPRA-207ENST00000431048 C20orf78Q9BR46 151 aa12.98□□□□□ -0.33
PTPRA-207ENST00000431048 SPANXA1Q9NS26 97 aa12.98□□□□□ -0.33
PTPRA-207ENST00000431048 RPL39P62891 51 aaKnown RBP12.97□□□□□ -0.33
PTPRA-207ENST00000431048 A0A087X002 238 aa12.96□□□□□ -0.33
PTPRA-207ENST00000431048 HBBP68871 147 aa12.96□□□□□ -0.33
PTPRA-207ENST00000431048 TRBV24-1A0A075B6N3 115 aa12.95□□□□□ -0.34
PTPRA-207ENST00000431048 TYMSOSQ8TAI1 123 aa12.95□□□□□ -0.34
PTPRA-207ENST00000431048 OSTCQ9NRP0 149 aa12.95□□□□□ -0.34
PTPRA-207ENST00000431048 TGIF2-C20orf24A0A0A6YYL0 155 aa12.94□□□□□ -0.34
PTPRA-207ENST00000431048 LINC00862A6NCI5 91 aa12.94□□□□□ -0.34
PTPRA-207ENST00000431048 IFITM10A6NMD0 228 aa12.94□□□□□ -0.34
PTPRA-207ENST00000431048 CRYGAP11844 174 aa12.94□□□□□ -0.34
PTPRA-207ENST00000431048 MRPL51Q4U2R6 128 aaKnown RBP12.93□□□□□ -0.34
PTPRA-207ENST00000431048 FAM104BQ5XKR9 115 aa12.93□□□□□ -0.34
PTPRA-207ENST00000431048 PACRGQ96M98 296 aaPredicted RBP12.93□□□□□ -0.34
PTPRA-207ENST00000431048 LBHQ53QV2 105 aaPredicted RBP12.92□□□□□ -0.34
PTPRA-207ENST00000431048 LINC01551Q86U37 167 aa12.92□□□□□ -0.34
PTPRA-207ENST00000431048 SLC51BQ86UW2 128 aa12.92□□□□□ -0.34
PTPRA-207ENST00000431048 CTDSP1Q9GZU7 261 aa12.92□□□□□ -0.34
PTPRA-207ENST00000431048 C22orf24Q9Y442 160 aa12.92□□□□□ -0.34
PTPRA-207ENST00000431048 C2orf82Q6UX34 121 aa12.91□□□□□ -0.34
PTPRA-207ENST00000431048 RPL28P46779 137 aaKnown RBP12.9□□□□□ -0.34
PTPRA-207ENST00000431048 TPRXLQ17RH7 258 aa12.9□□□□□ -0.34
PTPRA-207ENST00000431048 LINC01561Q8N1V8 128 aa12.9□□□□□ -0.34
PTPRA-207ENST00000431048 LINC00242Q5T6M2 205 aa12.89□□□□□ -0.35
PTPRA-207ENST00000431048 CDIP1Q9H305 208 aa12.88□□□□□ -0.35
PTPRA-207ENST00000431048 V9GYV3 84 aa12.88□□□□□ -0.35
PTPRA-207ENST00000431048 ZNF727A8MUV8 499 aa12.87□□□□□ -0.35
PTPRA-207ENST00000431048 CKS2P33552 79 aa12.87□□□□□ -0.35
PTPRA-207ENST00000431048 CEBPGP53567 150 aa12.87□□□□□ -0.35
PTPRA-207ENST00000431048 SMIM7Q9BQ49 75 aa12.87□□□□□ -0.35
PTPRA-207ENST00000431048 SMIM2Q9BVW6 85 aa12.87□□□□□ -0.35
PTPRA-207ENST00000431048 BCE1O60756 84 aa12.86□□□□□ -0.35
PTPRA-207ENST00000431048 TNFRSF6BO95407 300 aa12.86□□□□□ -0.35
PTPRA-207ENST00000431048 TP73-AS1Q9UF72 201 aa12.86□□□□□ -0.35
PTPRA-207ENST00000431048 NAT8BQ9UHF3 227 aa12.85□□□□□ -0.35
PTPRA-207ENST00000431048 PYGO1Q9Y3Y4 419 aa12.85□□□□□ -0.35
PTPRA-207ENST00000431048 CTAG1AP78358 180 aa12.84□□□□□ -0.35
PTPRA-207ENST00000431048 BLOC1S1P78537 153 aa12.84□□□□□ -0.35
PTPRA-207ENST00000431048 KRTAP13-2Q52LG2 175 aa12.83□□□□□ -0.36
PTPRA-207ENST00000431048 RETNLBQ9BQ08 111 aa12.83□□□□□ -0.36
PTPRA-207ENST00000431048 IFI27P40305 119 aaPredicted RBP12.82□□□□□ -0.36
PTPRA-207ENST00000431048 A0A1B0GW15 77 aa12.81□□□□□ -0.36
PTPRA-207ENST00000431048 FAM74A3Q4VXF1 159 aa12.81□□□□□ -0.36
PTPRA-207ENST00000431048 LCE2DQ5TA82 110 aaPredicted RBP12.81□□□□□ -0.36
PTPRA-207ENST00000431048 MRPL55Q7Z7F7 128 aaKnown RBP12.81□□□□□ -0.36
PTPRA-207ENST00000431048 LINC00469Q8N7U9 141 aa12.81□□□□□ -0.36
PTPRA-207ENST00000431048 IGLV7-46A0A075B6I9 117 aa12.8□□□□□ -0.36
PTPRA-207ENST00000431048 IGLV4-3A0A075B6K6 122 aa12.8□□□□□ -0.36
PTPRA-207ENST00000431048 LINC00304Q8N9R0 145 aa12.8□□□□□ -0.36
PTPRA-207ENST00000431048 XAGE1AQ9HD64 81 aa12.8□□□□□ -0.36
PTPRA-207ENST00000431048 PRSS2P07478 247 aa12.79□□□□□ -0.36
PTPRA-207ENST00000431048 FAM229BQ4G0N7 80 aa12.79□□□□□ -0.36
PTPRA-207ENST00000431048 Q6ZN92 141 aa12.79□□□□□ -0.36
PTPRA-207ENST00000431048 TMEM141Q96I45 108 aa12.79□□□□□ -0.36
PTPRA-207ENST00000431048 ANAPC11Q9NYG5 84 aa12.79□□□□□ -0.36
PTPRA-207ENST00000431048 D6R8Y8 96 aa12.78□□□□□ -0.36
PTPRA-207ENST00000431048 CKS1BP61024 79 aa12.78□□□□□ -0.36
PTPRA-207ENST00000431048 LINC00173Q6ZV60 143 aa12.78□□□□□ -0.36
PTPRA-207ENST00000431048 SMIM27A0A1W2PRY6 76 aa12.77□□□□□ -0.37
PTPRA-207ENST00000431048 NPYP01303 97 aa12.77□□□□□ -0.37
PTPRA-207ENST00000431048 C6orf226Q5I0X4 101 aa12.77□□□□□ -0.37
PTPRA-207ENST00000431048 Q8IZM0 81 aa12.77□□□□□ -0.37
PTPRA-207ENST00000431048 TCTE3Q8IZS6 198 aa12.77□□□□□ -0.37
PTPRA-207ENST00000431048 PPBPP02775 128 aa12.76□□□□□ -0.37
PTPRA-207ENST00000431048 RAB5AP20339 215 aa12.76□□□□□ -0.37
PTPRA-207ENST00000431048 TEX43Q6ZNM6 134 aa12.76□□□□□ -0.37
PTPRA-207ENST00000431048 EIF5A2Q9GZV4 153 aaKnown RBP12.76□□□□□ -0.37
PTPRA-207ENST00000431048 KRTAP13-1Q8IUC0 172 aa12.75□□□□□ -0.37
PTPRA-207ENST00000431048 SRP19P09132 144 aaKnown RBP12.74□□□□□ -0.37
PTPRA-207ENST00000431048 LINC00167Q96N53 147 aa12.74□□□□□ -0.37
PTPRA-207ENST00000431048 TOMM7Q9P0U1 55 aa12.74□□□□□ -0.37
PTPRA-207ENST00000431048 F8W036 122 aa12.73□□□□□ -0.37
PTPRA-207ENST00000431048 C2orf88Q9BSF0 95 aa12.73□□□□□ -0.37
PTPRA-207ENST00000431048 S100A8P05109 93 aa12.72□□□□□ -0.37
PTPRA-207ENST00000431048 FAM19A3Q7Z5A8 133 aa12.72□□□□□ -0.37
PTPRA-207ENST00000431048 ALKBH7Q9BT30 221 aaPredicted RBP12.72□□□□□ -0.37
PTPRA-207ENST00000431048 RPL23P62829 140 aaKnown RBP12.71□□□□□ -0.37
PTPRA-207ENST00000431048 ALKAL2Q6UX46 152 aa12.71□□□□□ -0.37
PTPRA-207ENST00000431048 AMELXQ99217 191 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms