RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 LINC00242Q5T6M2 205 aa7.31□□□□□ -1.24
CHD4-202ENST00000430771 KRTAP26-1Q6PEX3 210 aa7.31□□□□□ -1.24
CHD4-202ENST00000430771 HIST3H2BBQ8N257 126 aa7.31□□□□□ -1.24
CHD4-202ENST00000430771 CHAC1Q9BUX1 264 aa7.31□□□□□ -1.24
CHD4-202ENST00000430771 DNAH10Q8IVF4 4471 aa7.3□□□□□ -1.24
CHD4-202ENST00000430771 TINCRA0A1B0GVN0 87 aa7.3□□□□□ -1.24
CHD4-202ENST00000430771 F8VRH5 84 aa7.3□□□□□ -1.24
CHD4-202ENST00000430771 APOMO95445 188 aa7.3□□□□□ -1.24
CHD4-202ENST00000430771 IGLC3P0DOY3 106 aa7.3□□□□□ -1.24
CHD4-202ENST00000430771 CFAP161Q6P656 301 aa7.3□□□□□ -1.24
CHD4-202ENST00000430771 CHTOPQ9Y3Y2 248 aaKnown RBP7.3□□□□□ -1.24
CHD4-202ENST00000430771 DNAH17Q9UFH2 4485 aa7.29□□□□□ -1.24
CHD4-202ENST00000430771 A0A087WTM6 91 aa7.29□□□□□ -1.24
CHD4-202ENST00000430771 A0A0J9YXV3 536 aa7.29□□□□□ -1.24
CHD4-202ENST00000430771 SNRPEP62304 92 aaKnown RBP7.29□□□□□ -1.24
CHD4-202ENST00000430771 LINC00469Q8N7U9 141 aa7.29□□□□□ -1.24
CHD4-202ENST00000430771 TMA7Q9Y2S6 64 aaKnown RBP7.29□□□□□ -1.24
CHD4-202ENST00000430771 IGLV4-69A0A075B6H9 119 aa7.28□□□□□ -1.24
CHD4-202ENST00000430771 IGLV5-45A0A087WSX0 123 aa7.28□□□□□ -1.24
CHD4-202ENST00000430771 IGHV3OR16-9A0A0B4J2B5 98 aa7.28□□□□□ -1.24
CHD4-202ENST00000430771 IGHV1-58A0A0C4DH39 117 aa7.28□□□□□ -1.24
CHD4-202ENST00000430771 C5orf52A6NGY3 159 aa7.28□□□□□ -1.24
CHD4-202ENST00000430771 USP17L23D6RBM5 183 aa7.28□□□□□ -1.24
CHD4-202ENST00000430771 H3BRM9 83 aa7.28□□□□□ -1.24
CHD4-202ENST00000430771 TNP2Q05952 138 aa7.28□□□□□ -1.24
CHD4-202ENST00000430771 LINC01561Q8N1V8 128 aa7.28□□□□□ -1.24
CHD4-202ENST00000430771 MAPKAPK5-AS1Q8N8E1 139 aa7.28□□□□□ -1.24
CHD4-202ENST00000430771 A0A087WZ39 114 aa7.27□□□□□ -1.25
CHD4-202ENST00000430771 C20orf202A1L168 122 aa7.27□□□□□ -1.25
CHD4-202ENST00000430771 LRCOL1A6NCL2 159 aa7.27□□□□□ -1.25
CHD4-202ENST00000430771 SYS1-DBNDD2H3BUS1 97 aa7.27□□□□□ -1.25
CHD4-202ENST00000430771 PLNP26678 52 aa7.27□□□□□ -1.25
CHD4-202ENST00000430771 ODF1Q14990 250 aa7.27□□□□□ -1.25
CHD4-202ENST00000430771 PET117Q6UWS5 81 aa7.27□□□□□ -1.25
CHD4-202ENST00000430771 C5orf38Q86SI9 138 aa7.27□□□□□ -1.25
CHD4-202ENST00000430771 HIST1H2BLQ99880 126 aa7.27□□□□□ -1.25
CHD4-202ENST00000430771 MRPL35Q9NZE8 188 aaKnown RBP7.27□□□□□ -1.25
CHD4-202ENST00000430771 C11orf86A6NJI1 115 aa7.26□□□□□ -1.25
CHD4-202ENST00000430771 LECT2O14960 151 aa7.26□□□□□ -1.25
CHD4-202ENST00000430771 KRTDAPP60985 99 aa7.26□□□□□ -1.25
CHD4-202ENST00000430771 COX6A2Q02221 97 aa7.26□□□□□ -1.25
CHD4-202ENST00000430771 SPATA12Q7Z6I5 190 aa7.26□□□□□ -1.25
CHD4-202ENST00000430771 Q8N814 137 aa7.26□□□□□ -1.25
CHD4-202ENST00000430771 C15orf56Q8N910 161 aa7.26□□□□□ -1.25
CHD4-202ENST00000430771 OR10D4PQ8NGN7 298 aa7.26□□□□□ -1.25
CHD4-202ENST00000430771 CDKN2A-AS1Q9UH64 79 aa7.26□□□□□ -1.25
CHD4-202ENST00000430771 GVQW2A0A096LPI5 108 aaPredicted RBP7.25□□□□□ -1.25
CHD4-202ENST00000430771 hDV102S1A0JD36 115 aa7.25□□□□□ -1.25
CHD4-202ENST00000430771 DPM2O94777 84 aa7.25□□□□□ -1.25
CHD4-202ENST00000430771 C3orf79P0CE67 100 aa7.25□□□□□ -1.25
CHD4-202ENST00000430771 ZNF22P17026 224 aaPredicted RBP7.25□□□□□ -1.25
CHD4-202ENST00000430771 AKR1D1P51857 326 aa7.25□□□□□ -1.25
CHD4-202ENST00000430771 WFDC2Q14508 124 aa7.25□□□□□ -1.25
CHD4-202ENST00000430771 TMEM170BQ5T4T1 132 aa7.25□□□□□ -1.25
CHD4-202ENST00000430771 NTN5Q8WTR8 489 aaPredicted RBP7.25□□□□□ -1.25
CHD4-202ENST00000430771 ORAOV1Q8WV07 137 aa7.25□□□□□ -1.25
CHD4-202ENST00000430771 FAT2Q9NYQ8 4349 aa7.25□□□□□ -1.25
CHD4-202ENST00000430771 IGHV3-64A0A075B6Q5 118 aa7.24□□□□□ -1.25
CHD4-202ENST00000430771 ZNF561-AS1K7EIQ3 104 aa7.24□□□□□ -1.25
CHD4-202ENST00000430771 IGKCP01834 107 aa7.24□□□□□ -1.25
CHD4-202ENST00000430771 SPAG11BQ08648 103 aa7.24□□□□□ -1.25
CHD4-202ENST00000430771 LINC01545Q5VT33 79 aa7.24□□□□□ -1.25
CHD4-202ENST00000430771 SMIM1B2RUZ4 78 aa7.23□□□□□ -1.25
CHD4-202ENST00000430771 PRSS2P07478 247 aa7.23□□□□□ -1.25
CHD4-202ENST00000430771 HERVK_113P61574 105 aa7.23□□□□□ -1.25
CHD4-202ENST00000430771 HIGD2BQ4VC39 106 aa7.23□□□□□ -1.25
CHD4-202ENST00000430771 CDPF1Q6NVV7 123 aa7.23□□□□□ -1.25
CHD4-202ENST00000430771 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.22□□□□□ -1.25
CHD4-202ENST00000430771 SPINK8P0C7L1 97 aa7.22□□□□□ -1.25
CHD4-202ENST00000430771 CXCL5P42830 114 aa7.22□□□□□ -1.25
CHD4-202ENST00000430771 PMCHL2Q9BQD1 86 aa7.22□□□□□ -1.25
CHD4-202ENST00000430771 IGLV5-52A0A0A0MRZ9 124 aa7.21□□□□□ -1.26
CHD4-202ENST00000430771 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.21□□□□□ -1.26
CHD4-202ENST00000430771 F8WDY8 70 aa7.21□□□□□ -1.26
CHD4-202ENST00000430771 Q8IZM0 81 aa7.21□□□□□ -1.26
CHD4-202ENST00000430771 C2orf48Q96LS8 159 aa7.21□□□□□ -1.26
CHD4-202ENST00000430771 TOMM7Q9P0U1 55 aa7.21□□□□□ -1.26
CHD4-202ENST00000430771 A0A1B0GVY2 172 aa7.2□□□□□ -1.26
CHD4-202ENST00000430771 TMEM223A0PJW6 202 aa7.2□□□□□ -1.26
CHD4-202ENST00000430771 NDUFA1O15239 70 aa7.2□□□□□ -1.26
CHD4-202ENST00000430771 CNBPP62633 177 aaKnown RBP7.2□□□□□ -1.26
CHD4-202ENST00000430771 CARD19Q96LW7 228 aa7.2□□□□□ -1.26
CHD4-202ENST00000430771 CAMK2N2Q96S95 79 aa7.2□□□□□ -1.26
CHD4-202ENST00000430771 PKIGQ9Y2B9 76 aa7.2□□□□□ -1.26
CHD4-202ENST00000430771 IGLV5-39A0A0G2JS06 123 aa7.19□□□□□ -1.26
CHD4-202ENST00000430771 COX7B2Q8TF08 81 aa7.19□□□□□ -1.26
CHD4-202ENST00000430771 CKS1BP61024 79 aa7.18□□□□□ -1.26
CHD4-202ENST00000430771 SYCNQ0VAF6 134 aa7.18□□□□□ -1.26
CHD4-202ENST00000430771 C6orf226Q5I0X4 101 aa7.18□□□□□ -1.26
CHD4-202ENST00000430771 SFTA2Q6UW10 78 aa7.18□□□□□ -1.26
CHD4-202ENST00000430771 PGPEP1Q9NXJ5 209 aa7.18□□□□□ -1.26
CHD4-202ENST00000430771 DNAH11Q96DT5 4516 aa7.18□□□□□ -1.26
CHD4-202ENST00000430771 HECTD4Q9Y4D8 3996 aa7.18□□□□□ -1.26
CHD4-202ENST00000430771 KRTAP10-2P60368 255 aa7.17□□□□□ -1.26
CHD4-202ENST00000430771 KIAA0087Q14695 138 aa7.17□□□□□ -1.26
CHD4-202ENST00000430771 LINC00526Q96FQ7 95 aa7.17□□□□□ -1.26
CHD4-202ENST00000430771 TRBV30A0A0K0K1B3 111 aa7.16□□□□□ -1.26
CHD4-202ENST00000430771 SCGB1D1O95968 90 aa7.16□□□□□ -1.26
CHD4-202ENST00000430771 PLEKHB2Q96CS7 222 aa7.16□□□□□ -1.26
CHD4-202ENST00000430771 DNAH5Q8TE73 4624 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms