RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 GAGE12FP0CL80 117 aa10.75□□□□□ -0.69
LINC00839-202ENST00000429940 GAGE12GP0CL81 117 aa10.75□□□□□ -0.69
LINC00839-202ENST00000429940 GAGE12IP0CL82 117 aa10.75□□□□□ -0.69
LINC00839-202ENST00000429940 GAGE4Q13068 117 aa10.75□□□□□ -0.69
LINC00839-202ENST00000429940 FAM19A3Q7Z5A8 133 aa10.75□□□□□ -0.69
LINC00839-202ENST00000429940 COPS9Q8WXC6 57 aa10.75□□□□□ -0.69
LINC00839-202ENST00000429940 SETD2Q9BYW2 2564 aaPredicted RBP10.75□□□□□ -0.69
LINC00839-202ENST00000429940 MEIG1Q5JSS6 88 aa10.75□□□□□ -0.69
LINC00839-202ENST00000429940 HIST2H2BDQ6DRA6 164 aa10.75□□□□□ -0.69
LINC00839-202ENST00000429940 SOSTDC1Q6X4U4 206 aa10.75□□□□□ -0.69
LINC00839-202ENST00000429940 CCDC179H3BU77 68 aa10.74□□□□□ -0.69
LINC00839-202ENST00000429940 PRIMA1Q86XR5 153 aa10.74□□□□□ -0.69
LINC00839-202ENST00000429940 Q8N2B8 174 aa10.74□□□□□ -0.69
LINC00839-202ENST00000429940 RPL36AP83881 106 aaKnown RBP10.74□□□□□ -0.69
LINC00839-202ENST00000429940 RPL36ALQ969Q0 106 aaKnown RBP10.74□□□□□ -0.69
LINC00839-202ENST00000429940 HIVEP2P31629 2446 aa10.73□□□□□ -0.69
LINC00839-202ENST00000429940 CSDC2Q9Y534 153 aaKnown RBP10.73□□□□□ -0.69
LINC00839-202ENST00000429940 NTM-AS1Q6ZSK4 140 aa10.73□□□□□ -0.69
LINC00839-202ENST00000429940 STHQ8IWL8 128 aa10.73□□□□□ -0.69
LINC00839-202ENST00000429940 C1orf158Q8N1D5 194 aa10.73□□□□□ -0.69
LINC00839-202ENST00000429940 IL17DQ8TAD2 202 aa10.73□□□□□ -0.69
LINC00839-202ENST00000429940 K7EQD1 137 aa10.72□□□□□ -0.69
LINC00839-202ENST00000429940 ODF3L2Q3SX64 289 aa10.72□□□□□ -0.69
LINC00839-202ENST00000429940 SHISA2Q6UWI4 295 aa10.72□□□□□ -0.69
LINC00839-202ENST00000429940 DAZ2Q13117 558 aaKnown RBP10.72□□□□□ -0.69
LINC00839-202ENST00000429940 DAZ4Q86SG3 579 aaKnown RBP10.72□□□□□ -0.69
LINC00839-202ENST00000429940 DAZ3Q9NR90 486 aaKnown RBP10.72□□□□□ -0.69
LINC00839-202ENST00000429940 TRBV10-1A0A0K0K1A3 114 aa10.71□□□□□ -0.69
LINC00839-202ENST00000429940 CDC42SE2Q9NRR3 84 aa10.71□□□□□ -0.69
LINC00839-202ENST00000429940 NSD1Q96L73 2696 aaPredicted RBP10.71□□□□□ -0.7
LINC00839-202ENST00000429940 CYSRT1A8MQ03 144 aa10.7□□□□□ -0.7
LINC00839-202ENST00000429940 F5H768 121 aa10.7□□□□□ -0.7
LINC00839-202ENST00000429940 Q6ZTI0 123 aa10.7□□□□□ -0.7
LINC00839-202ENST00000429940 HERV-K104P63124 156 aa10.7□□□□□ -0.7
LINC00839-202ENST00000429940 TEP1Q99973 2627 aaKnown RBP10.69□□□□□ -0.7
LINC00839-202ENST00000429940 TRBV7-7A0A0K0K1E9 115 aa10.69□□□□□ -0.7
LINC00839-202ENST00000429940 ACYP1P07311 99 aa10.69□□□□□ -0.7
LINC00839-202ENST00000429940 UBE2L6O14933 153 aa10.68□□□□□ -0.7
LINC00839-202ENST00000429940 LY6G6DO95868 133 aa10.68□□□□□ -0.7
LINC00839-202ENST00000429940 TRACP01848 142 aa10.68□□□□□ -0.7
LINC00839-202ENST00000429940 SVIPQ8NHG7 77 aa10.68□□□□□ -0.7
LINC00839-202ENST00000429940 F8P00451 2351 aa10.67□□□□□ -0.7
LINC00839-202ENST00000429940 TRAV25A0A0B4J276 109 aa10.66□□□□□ -0.7
LINC00839-202ENST00000429940 BAALC-AS2P0C853 105 aa10.66□□□□□ -0.7
LINC00839-202ENST00000429940 CHCHD5Q9BSY4 110 aa10.66□□□□□ -0.7
LINC00839-202ENST00000429940 TMEM243Q9BU79 118 aa10.66□□□□□ -0.7
LINC00839-202ENST00000429940 FAM218AQ96MZ4 157 aa10.65□□□□□ -0.7
LINC00839-202ENST00000429940 FN1P02751 2386 aaKnown RBP10.65□□□□□ -0.7
LINC00839-202ENST00000429940 PPDPFQ9H3Y8 114 aa10.65□□□□□ -0.7
LINC00839-202ENST00000429940 NOP10Q9NPE3 64 aaKnown RBP10.65□□□□□ -0.7
LINC00839-202ENST00000429940 SMCR5Q8TEV8 140 aa10.64□□□□□ -0.71
LINC00839-202ENST00000429940 TRAV13-2A0A0B4J235 113 aa10.63□□□□□ -0.71
LINC00839-202ENST00000429940 A0A1W2PRX2 142 aa10.63□□□□□ -0.71
LINC00839-202ENST00000429940 C11orf44Q8N8P7 122 aa10.63□□□□□ -0.71
LINC00839-202ENST00000429940 ESM1Q9NQ30 184 aa10.63□□□□□ -0.71
LINC00839-202ENST00000429940 CRPP02741 224 aa10.62□□□□□ -0.71
LINC00839-202ENST00000429940 PF4P02776 101 aa10.62□□□□□ -0.71
LINC00839-202ENST00000429940 COX7B2Q8TF08 81 aa10.62□□□□□ -0.71
LINC00839-202ENST00000429940 IMUPQ9GZP8 106 aa10.62□□□□□ -0.71
LINC00839-202ENST00000429940 C22orf24Q9Y442 160 aa10.62□□□□□ -0.71
LINC00839-202ENST00000429940 MIR7-3HGQ8N6C7 128 aa10.61□□□□□ -0.71
LINC00839-202ENST00000429940 JMJD1CQ15652 2540 aa10.61□□□□□ -0.71
LINC00839-202ENST00000429940 MAST4O15021 2626 aa10.61□□□□□ -0.71
LINC00839-202ENST00000429940 LOC100131303A0A0U1RQF7 123 aa10.61□□□□□ -0.71
LINC00839-202ENST00000429940 FAM236AA0A1B0GUQ0 79 aa10.61□□□□□ -0.71
LINC00839-202ENST00000429940 FAM236BA0A1B0GV22 79 aa10.61□□□□□ -0.71
LINC00839-202ENST00000429940 RPL28P46779 137 aaKnown RBP10.61□□□□□ -0.71
LINC00839-202ENST00000429940 FAM222AQ5U5X8 452 aa10.61□□□□□ -0.71
LINC00839-202ENST00000429940 LINC00643Q86TS7 51 aa10.61□□□□□ -0.71
LINC00839-202ENST00000429940 TOMM7Q9P0U1 55 aa10.61□□□□□ -0.71
LINC00839-202ENST00000429940 TRGV2A0A075B6R0 118 aa10.6□□□□□ -0.71
LINC00839-202ENST00000429940 INAFM1C9JVW0 142 aa10.6□□□□□ -0.71
LINC00839-202ENST00000429940 Q9HAA7 133 aa10.6□□□□□ -0.71
LINC00839-202ENST00000429940 SND1-IT1Q9HBX3 110 aa10.6□□□□□ -0.71
LINC00839-202ENST00000429940 IGKV3OR2-268A0A0C4DH90 116 aa10.6□□□□□ -0.71
LINC00839-202ENST00000429940 LINC00337Q8N6G1 96 aa10.6□□□□□ -0.71
LINC00839-202ENST00000429940 DNAJC9-AS1A6NH13 148 aa10.59□□□□□ -0.71
LINC00839-202ENST00000429940 CCL24O00175 119 aa10.59□□□□□ -0.71
LINC00839-202ENST00000429940 IGKV2-28A0A075B6P5 120 aa10.59□□□□□ -0.71
LINC00839-202ENST00000429940 IGKV2D-28P01615 120 aa10.59□□□□□ -0.71
LINC00839-202ENST00000429940 INAFM2P0DMQ5 153 aa10.59□□□□□ -0.71
LINC00839-202ENST00000429940 MALP21145 153 aa10.59□□□□□ -0.71
LINC00839-202ENST00000429940 C16orf74Q96GX8 76 aa10.59□□□□□ -0.71
LINC00839-202ENST00000429940 PLAC8L1A1L4L8 177 aa10.58□□□□□ -0.72
LINC00839-202ENST00000429940 LINC00158P58513 81 aa10.58□□□□□ -0.72
LINC00839-202ENST00000429940 TRBV6-4A0A1B0GX49 114 aa10.57□□□□□ -0.72
LINC00839-202ENST00000429940 GIG44P09565 113 aaPredicted RBP10.57□□□□□ -0.72
LINC00839-202ENST00000429940 GAGE2AQ6NT46 116 aa10.57□□□□□ -0.72
LINC00839-202ENST00000429940 SDIM1Q6ZPB5 146 aa10.57□□□□□ -0.72
LINC00839-202ENST00000429940 TRGV4A0A0C4DH28 118 aa10.56□□□□□ -0.72
LINC00839-202ENST00000429940 TMEM86BQ8N661 226 aa10.56□□□□□ -0.72
LINC00839-202ENST00000429940 SMIM11BQ8TCY0 68 aa10.56□□□□□ -0.72
LINC00839-202ENST00000429940 OVOL2Q9BRP0 275 aa10.56□□□□□ -0.72
LINC00839-202ENST00000429940 IGLV4-60A0A075B6I1 120 aa10.55□□□□□ -0.72
LINC00839-202ENST00000429940 DNAL4O96015 105 aa10.55□□□□□ -0.72
LINC00839-202ENST00000429940 A0A087WYN8 130 aa10.55□□□□□ -0.72
LINC00839-202ENST00000429940 RPL35AP18077 110 aaKnown RBP10.55□□□□□ -0.72
LINC00839-202ENST00000429940 WFDC10AQ9H1F0 79 aa10.55□□□□□ -0.72
LINC00839-202ENST00000429940 CCL18P55774 89 aa10.54□□□□□ -0.72
LINC00839-202ENST00000429940 TRBV6-8A0A0A6YYG3 113 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms