RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 SPXQ9BT56 116 aa6.8□□□□□ -1.32
NEDD1-203ENST00000429527 IMUPQ9GZP8 106 aa6.8□□□□□ -1.32
NEDD1-203ENST00000429527 EDN2P20800 178 aa6.8□□□□□ -1.32
NEDD1-203ENST00000429527 ICOSQ9Y6W8 199 aa6.8□□□□□ -1.32
NEDD1-203ENST00000429527 A0A0J9YXV3 536 aa6.79□□□□□ -1.32
NEDD1-203ENST00000429527 H7C423 109 aa6.79□□□□□ -1.32
NEDD1-203ENST00000429527 SPRY2O43597 315 aa6.79□□□□□ -1.32
NEDD1-203ENST00000429527 ACYP1P07311 99 aa6.78□□□□□ -1.32
NEDD1-203ENST00000429527 ODF3L2Q3SX64 289 aa6.78□□□□□ -1.32
NEDD1-203ENST00000429527 FAM222AQ5U5X8 452 aa6.78□□□□□ -1.32
NEDD1-203ENST00000429527 ADAMTSL4-AS1Q5T5F5 129 aa6.78□□□□□ -1.32
NEDD1-203ENST00000429527 TRAV26-1A0A087WT03 109 aa6.77□□□□□ -1.33
NEDD1-203ENST00000429527 H3BMM0 161 aa6.77□□□□□ -1.33
NEDD1-203ENST00000429527 ZNF56Q15929 161 aa6.77□□□□□ -1.33
NEDD1-203ENST00000429527 NOTCH1P46531 2555 aa6.77□□□□□ -1.33
NEDD1-203ENST00000429527 COPS9Q8WXC6 57 aa6.77□□□□□ -1.33
NEDD1-203ENST00000429527 C9JAW5 83 aa6.77□□□□□ -1.33
NEDD1-203ENST00000429527 RPL11P62913 178 aaKnown RBP6.77□□□□□ -1.33
NEDD1-203ENST00000429527 MUC7Q8TAX7 377 aa6.77□□□□□ -1.33
NEDD1-203ENST00000429527 C11orf68Q9H3H3 251 aaKnown RBP6.77□□□□□ -1.33
NEDD1-203ENST00000429527 APOC4P55056 127 aa6.76□□□□□ -1.33
NEDD1-203ENST00000429527 ZNF415Q09FC8 603 aa6.76□□□□□ -1.33
NEDD1-203ENST00000429527 UBE2WQ96B02 151 aa6.76□□□□□ -1.33
NEDD1-203ENST00000429527 OPRPNQ99935 248 aaPredicted RBP6.76□□□□□ -1.33
NEDD1-203ENST00000429527 NDUFV3P56181 108 aaKnown RBP6.76□□□□□ -1.33
NEDD1-203ENST00000429527 C2orf82Q6UX34 121 aa6.76□□□□□ -1.33
NEDD1-203ENST00000429527 ZNF625Q96I27 306 aaPredicted RBP6.76□□□□□ -1.33
NEDD1-203ENST00000429527 NDUFA12Q9UI09 145 aa6.76□□□□□ -1.33
NEDD1-203ENST00000429527 OVOL2Q9BRP0 275 aa6.75□□□□□ -1.33
NEDD1-203ENST00000429527 NOTCH3Q9UM47 2321 aa6.75□□□□□ -1.33
NEDD1-203ENST00000429527 TRBV10-1A0A0K0K1A3 114 aa6.75□□□□□ -1.33
NEDD1-203ENST00000429527 J3KRW8 73 aa6.75□□□□□ -1.33
NEDD1-203ENST00000429527 TRACP01848 142 aa6.75□□□□□ -1.33
NEDD1-203ENST00000429527 GAGE5Q13069 117 aa6.75□□□□□ -1.33
NEDD1-203ENST00000429527 GAGE6Q13070 117 aa6.75□□□□□ -1.33
NEDD1-203ENST00000429527 EMP1P54849 157 aa6.75□□□□□ -1.33
NEDD1-203ENST00000429527 MAP6D1Q9H9H5 199 aa6.75□□□□□ -1.33
NEDD1-203ENST00000429527 TRAV4A0A0B4J268 109 aa6.74□□□□□ -1.33
NEDD1-203ENST00000429527 F5H697 171 aa6.74□□□□□ -1.33
NEDD1-203ENST00000429527 F5H768 121 aa6.74□□□□□ -1.33
NEDD1-203ENST00000429527 HERVK_113P63121 156 aa6.74□□□□□ -1.33
NEDD1-203ENST00000429527 HERV-K104P63124 156 aa6.74□□□□□ -1.33
NEDD1-203ENST00000429527 CASC10Q5T4H9 136 aa6.74□□□□□ -1.33
NEDD1-203ENST00000429527 NTN5Q8WTR8 489 aaPredicted RBP6.74□□□□□ -1.33
NEDD1-203ENST00000429527 OBSCN-AS1Q96MR7 158 aa6.74□□□□□ -1.33
NEDD1-203ENST00000429527 C22orf24Q9Y442 160 aa6.74□□□□□ -1.33
NEDD1-203ENST00000429527 LINC00694P0DN24 101 aa6.73□□□□□ -1.33
NEDD1-203ENST00000429527 SPINK13Q1W4C9 94 aa6.73□□□□□ -1.33
NEDD1-203ENST00000429527 COX7A2LO14548 114 aa6.73□□□□□ -1.33
NEDD1-203ENST00000429527 COX6CP09669 75 aa6.73□□□□□ -1.33
NEDD1-203ENST00000429527 TMEM101Q96IK0 257 aa6.73□□□□□ -1.33
NEDD1-203ENST00000429527 TRAV8-4A0A0B4J246 113 aa6.72□□□□□ -1.33
NEDD1-203ENST00000429527 ATP5G1P05496 136 aa6.72□□□□□ -1.33
NEDD1-203ENST00000429527 Q6ZSN1 163 aa6.72□□□□□ -1.33
NEDD1-203ENST00000429527 SACSQ9NZJ4 4579 aa6.72□□□□□ -1.33
NEDD1-203ENST00000429527 TRAV12-2A0A075B6T6 113 aa6.72□□□□□ -1.33
NEDD1-203ENST00000429527 CXCL5P42830 114 aa6.72□□□□□ -1.33
NEDD1-203ENST00000429527 DAND5Q8N907 189 aa6.72□□□□□ -1.33
NEDD1-203ENST00000429527 LINC00308Q8TCZ7 52 aa6.72□□□□□ -1.33
NEDD1-203ENST00000429527 STARD9Q9P2P6 4700 aa6.71□□□□□ -1.33
NEDD1-203ENST00000429527 RYR2Q92736 4967 aa6.71□□□□□ -1.33
NEDD1-203ENST00000429527 IGHV3OR16-12A0A075B7B8 117 aa6.71□□□□□ -1.33
NEDD1-203ENST00000429527 ANAPC13Q9BS18 74 aa6.71□□□□□ -1.33
NEDD1-203ENST00000429527 TNFRSF18Q9Y5U5 241 aa6.71□□□□□ -1.33
NEDD1-203ENST00000429527 SMIM1B2RUZ4 78 aa6.71□□□□□ -1.34
NEDD1-203ENST00000429527 HIST1H4AP62805 103 aaKnown RBP6.71□□□□□ -1.34
NEDD1-203ENST00000429527 GAGE2BQ13066 116 aa6.71□□□□□ -1.34
NEDD1-203ENST00000429527 GAGE2EQ4V326 116 aa6.71□□□□□ -1.34
NEDD1-203ENST00000429527 LINC00242Q5T6M2 205 aa6.71□□□□□ -1.34
NEDD1-203ENST00000429527 FAM74A4Q5TZK3 123 aa6.71□□□□□ -1.34
NEDD1-203ENST00000429527 GAGE2DQ9UEU5 116 aa6.71□□□□□ -1.34
NEDD1-203ENST00000429527 TEX49A0A1B0GTD5 131 aa6.71□□□□□ -1.34
NEDD1-203ENST00000429527 SNCGO76070 127 aa6.71□□□□□ -1.34
NEDD1-203ENST00000429527 DAZ2Q13117 558 aaKnown RBP6.71□□□□□ -1.34
NEDD1-203ENST00000429527 DAZ4Q86SG3 579 aaKnown RBP6.71□□□□□ -1.34
NEDD1-203ENST00000429527 C15orf53Q8NAA6 179 aa6.71□□□□□ -1.34
NEDD1-203ENST00000429527 DAZ3Q9NR90 486 aaKnown RBP6.71□□□□□ -1.34
NEDD1-203ENST00000429527 LCE6AA0A183 80 aa6.7□□□□□ -1.34
NEDD1-203ENST00000429527 CSNK1G2-AS1Q8NCQ2 148 aa6.7□□□□□ -1.34
NEDD1-203ENST00000429527 TRAV8-3A0A0A6YYJ7 113 aa6.7□□□□□ -1.34
NEDD1-203ENST00000429527 GIG44P09565 113 aaPredicted RBP6.7□□□□□ -1.34
NEDD1-203ENST00000429527 RPL28P46779 137 aaKnown RBP6.69□□□□□ -1.34
NEDD1-203ENST00000429527 C5orf38Q86SI9 138 aa6.69□□□□□ -1.34
NEDD1-203ENST00000429527 WFDC10AQ9H1F0 79 aa6.69□□□□□ -1.34
NEDD1-203ENST00000429527 LINC01561Q8N1V8 128 aa6.69□□□□□ -1.34
NEDD1-203ENST00000429527 PLECQ15149 4684 aaKnown RBP6.69□□□□□ -1.34
NEDD1-203ENST00000429527 SFTA2Q6UW10 78 aa6.69□□□□□ -1.34
NEDD1-203ENST00000429527 TGP01266 2768 aa6.69□□□□□ -1.34
NEDD1-203ENST00000429527 CSMD3Q7Z407 3707 aa6.68□□□□□ -1.34
NEDD1-203ENST00000429527 INSP01308 110 aa6.68□□□□□ -1.34
NEDD1-203ENST00000429527 CDKN2A-AS1Q9UH64 79 aa6.68□□□□□ -1.34
NEDD1-203ENST00000429527 GAGE12JA6NER3 117 aa6.68□□□□□ -1.34
NEDD1-203ENST00000429527 GAGE7O76087 117 aa6.68□□□□□ -1.34
NEDD1-203ENST00000429527 GAGE12FP0CL80 117 aa6.68□□□□□ -1.34
NEDD1-203ENST00000429527 GAGE12GP0CL81 117 aa6.68□□□□□ -1.34
NEDD1-203ENST00000429527 GAGE12IP0CL82 117 aa6.68□□□□□ -1.34
NEDD1-203ENST00000429527 GAGE4Q13068 117 aa6.68□□□□□ -1.34
NEDD1-203ENST00000429527 CIRBPQ14011 172 aaKnown RBP6.68□□□□□ -1.34
NEDD1-203ENST00000429527 SOSTDC1Q6X4U4 206 aa6.68□□□□□ -1.34
NEDD1-203ENST00000429527 CDC42SE2Q9NRR3 84 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms