RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 UBE2D1P51668 147 aa5.9□□□□□ -1.46
HPS4-205ENST00000429411 NSUN5P1Q3KNT7 163 aa5.9□□□□□ -1.46
HPS4-205ENST00000429411 Q6ZSN1 163 aa5.9□□□□□ -1.46
HPS4-205ENST00000429411 Q9H8V8 135 aa5.9□□□□□ -1.46
HPS4-205ENST00000429411 CDKN2A-AS1Q9UH64 79 aa5.9□□□□□ -1.46
HPS4-205ENST00000429411 TENM1Q9UKZ4 2725 aa5.9□□□□□ -1.47
HPS4-205ENST00000429411 USP17L23D6RBM5 183 aa5.9□□□□□ -1.47
HPS4-205ENST00000429411 TMEM262E9PQX1 116 aa5.9□□□□□ -1.47
HPS4-205ENST00000429411 TRAV8-4A0A0B4J246 113 aa5.89□□□□□ -1.47
HPS4-205ENST00000429411 TEX49A0A1B0GTD5 131 aa5.89□□□□□ -1.47
HPS4-205ENST00000429411 H3BMM0 161 aa5.89□□□□□ -1.47
HPS4-205ENST00000429411 SMCPP49901 116 aaPredicted RBP5.89□□□□□ -1.47
HPS4-205ENST00000429411 DSCR9P59020 149 aa5.89□□□□□ -1.47
HPS4-205ENST00000429411 NOP10Q9NPE3 64 aaKnown RBP5.89□□□□□ -1.47
HPS4-205ENST00000429411 TRGV4A0A0C4DH28 118 aa5.89□□□□□ -1.47
HPS4-205ENST00000429411 IGHV3-33P01772 117 aa5.89□□□□□ -1.47
HPS4-205ENST00000429411 DEFB130BP0DP73 79 aa5.89□□□□□ -1.47
HPS4-205ENST00000429411 DEFB130AP0DP74 79 aa5.89□□□□□ -1.47
HPS4-205ENST00000429411 RPL36AP83881 106 aaKnown RBP5.89□□□□□ -1.47
HPS4-205ENST00000429411 FAM19A1Q7Z5A9 133 aa5.89□□□□□ -1.47
HPS4-205ENST00000429411 KRTAP1-3Q8IUG1 177 aa5.89□□□□□ -1.47
HPS4-205ENST00000429411 RPL36ALQ969Q0 106 aaKnown RBP5.89□□□□□ -1.47
HPS4-205ENST00000429411 NBEAL2Q6ZNJ1 2754 aa5.89□□□□□ -1.47
HPS4-205ENST00000429411 GAGE2BQ13066 116 aa5.89□□□□□ -1.47
HPS4-205ENST00000429411 GAGE2EQ4V326 116 aa5.89□□□□□ -1.47
HPS4-205ENST00000429411 MRPL55Q7Z7F7 128 aaKnown RBP5.89□□□□□ -1.47
HPS4-205ENST00000429411 CHCHD5Q9BSY4 110 aa5.89□□□□□ -1.47
HPS4-205ENST00000429411 GAGE2DQ9UEU5 116 aa5.89□□□□□ -1.47
HPS4-205ENST00000429411 A0A096LPF7 62 aa5.88□□□□□ -1.47
HPS4-205ENST00000429411 FAM19A4Q96LR4 140 aa5.88□□□□□ -1.47
HPS4-205ENST00000429411 CARD19Q96LW7 228 aa5.88□□□□□ -1.47
HPS4-205ENST00000429411 WFDC10AQ9H1F0 79 aa5.88□□□□□ -1.47
HPS4-205ENST00000429411 MAP6D1Q9H9H5 199 aa5.88□□□□□ -1.47
HPS4-205ENST00000429411 TRBV6-5A0A0K0K1A5 114 aa5.88□□□□□ -1.47
HPS4-205ENST00000429411 FAM236AA0A1B0GUQ0 79 aa5.88□□□□□ -1.47
HPS4-205ENST00000429411 FAM236BA0A1B0GV22 79 aa5.88□□□□□ -1.47
HPS4-205ENST00000429411 TRIAP1O43715 76 aa5.87□□□□□ -1.47
HPS4-205ENST00000429411 RNASE1P07998 156 aaKnown RBP5.87□□□□□ -1.47
HPS4-205ENST00000429411 ADAMTSL4-AS1Q5T5F5 129 aa5.87□□□□□ -1.47
HPS4-205ENST00000429411 Q6ZTI0 123 aa5.87□□□□□ -1.47
HPS4-205ENST00000429411 ZNF702PQ9H963 129 aa5.87□□□□□ -1.47
HPS4-205ENST00000429411 PRO0461Q9UI25 63 aa5.87□□□□□ -1.47
HPS4-205ENST00000429411 IGHV1-58A0A0C4DH39 117 aa5.87□□□□□ -1.47
HPS4-205ENST00000429411 NHLRC4P0CG21 123 aaPredicted RBP5.87□□□□□ -1.47
HPS4-205ENST00000429411 PFN2P35080 140 aa5.87□□□□□ -1.47
HPS4-205ENST00000429411 CLPSL2Q6UWE3 100 aa5.87□□□□□ -1.47
HPS4-205ENST00000429411 UBE2WQ96B02 151 aa5.87□□□□□ -1.47
HPS4-205ENST00000429411 LINC00158P58513 81 aa5.87□□□□□ -1.47
HPS4-205ENST00000429411 ICOSQ9Y6W8 199 aa5.87□□□□□ -1.47
HPS4-205ENST00000429411 RBMY1BA6NDE4 496 aaKnown RBP5.86□□□□□ -1.47
HPS4-205ENST00000429411 RBMY1EA6NEQ0 496 aaKnown RBP5.86□□□□□ -1.47
HPS4-205ENST00000429411 NXPH4O95158 308 aa5.86□□□□□ -1.47
HPS4-205ENST00000429411 RBMY1DP0C7P1 496 aaKnown RBP5.86□□□□□ -1.47
HPS4-205ENST00000429411 UBE2D3P61077 147 aa5.86□□□□□ -1.47
HPS4-205ENST00000429411 UBE2D2P62837 147 aa5.86□□□□□ -1.47
HPS4-205ENST00000429411 POM121L12Q8N7R1 296 aa5.86□□□□□ -1.47
HPS4-205ENST00000429411 NDUFV3P56181 108 aaKnown RBP5.85□□□□□ -1.47
HPS4-205ENST00000429411 Q6YL49 198 aa5.85□□□□□ -1.47
HPS4-205ENST00000429411 C15orf53Q8NAA6 179 aa5.85□□□□□ -1.47
HPS4-205ENST00000429411 IFITM1P13164 125 aa5.84□□□□□ -1.47
HPS4-205ENST00000429411 CD164Q04900 197 aa5.84□□□□□ -1.47
HPS4-205ENST00000429411 TMEM263Q8WUH6 116 aaKnown RBP5.84□□□□□ -1.47
HPS4-205ENST00000429411 VSIG2Q96IQ7 327 aa5.84□□□□□ -1.47
HPS4-205ENST00000429411 LOC100131303A0A0U1RQF7 123 aa5.84□□□□□ -1.47
HPS4-205ENST00000429411 HTN3P15516 51 aa5.84□□□□□ -1.47
HPS4-205ENST00000429411 C5orf38Q86SI9 138 aa5.84□□□□□ -1.47
HPS4-205ENST00000429411 BRK1Q8WUW1 75 aa5.84□□□□□ -1.47
HPS4-205ENST00000429411 ESM1Q9NQ30 184 aa5.84□□□□□ -1.47
HPS4-205ENST00000429411 DEFB114Q30KQ6 69 aa5.84□□□□□ -1.47
HPS4-205ENST00000429411 PIK3CD-AS1Q5SR53 167 aa5.84□□□□□ -1.47
HPS4-205ENST00000429411 ODF3Q96PU9 254 aa5.84□□□□□ -1.47
HPS4-205ENST00000429411 MDFIQ99750 246 aa5.84□□□□□ -1.47
HPS4-205ENST00000429411 CRLF1O75462 422 aa5.83□□□□□ -1.48
HPS4-205ENST00000429411 DNAL4O96015 105 aa5.83□□□□□ -1.48
HPS4-205ENST00000429411 Q6Q795 121 aa5.83□□□□□ -1.48
HPS4-205ENST00000429411 UBE2D4Q9Y2X8 147 aa5.83□□□□□ -1.48
HPS4-205ENST00000429411 PAX4O43316 350 aa5.83□□□□□ -1.48
HPS4-205ENST00000429411 COX6A2Q02221 97 aa5.83□□□□□ -1.48
HPS4-205ENST00000429411 PMAIP1Q13794 54 aa5.83□□□□□ -1.48
HPS4-205ENST00000429411 MIAQ16674 131 aa5.83□□□□□ -1.48
HPS4-205ENST00000429411 KLK9Q2XQG4 91 aa5.83□□□□□ -1.48
HPS4-205ENST00000429411 A0A0B4J2C4 111 aa5.82□□□□□ -1.48
HPS4-205ENST00000429411 C9orf153Q5TBE3 101 aa5.82□□□□□ -1.48
HPS4-205ENST00000429411 TRAV4A0A0B4J268 109 aa5.82□□□□□ -1.48
HPS4-205ENST00000429411 EIF4EBP3O60516 100 aaPredicted RBP5.82□□□□□ -1.48
HPS4-205ENST00000429411 HERVK_113P63121 156 aa5.82□□□□□ -1.48
HPS4-205ENST00000429411 TMEM243Q9BU79 118 aa5.82□□□□□ -1.48
HPS4-205ENST00000429411 CHCHD7Q9BUK0 85 aa5.82□□□□□ -1.48
HPS4-205ENST00000429411 Q9HAA7 133 aa5.82□□□□□ -1.48
HPS4-205ENST00000429411 TRBV10-2A0A0K0K1G8 114 aa5.81□□□□□ -1.48
HPS4-205ENST00000429411 FAM240AA0A1B0GVK7 77 aa5.81□□□□□ -1.48
HPS4-205ENST00000429411 DEFB4AO15263 64 aa5.81□□□□□ -1.48
HPS4-205ENST00000429411 CRPP02741 224 aa5.81□□□□□ -1.48
HPS4-205ENST00000429411 MRPS36P82909 103 aaKnown RBP5.81□□□□□ -1.48
HPS4-205ENST00000429411 ODF3L2Q3SX64 289 aa5.81□□□□□ -1.48
HPS4-205ENST00000429411 AMELXQ99217 191 aa5.81□□□□□ -1.48
HPS4-205ENST00000429411 A0A0A0MQY5 61 aa5.81□□□□□ -1.48
HPS4-205ENST00000429411 K7EQD1 137 aa5.81□□□□□ -1.48
HPS4-205ENST00000429411 GAGE2AQ6NT46 116 aa5.81□□□□□ -1.48
HPS4-205ENST00000429411 AKAP9Q99996 3911 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms