RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 PYGO1Q9Y3Y4 419 aa8.96□□□□□ -0.97
CDH3-202ENST00000429102 HECTD1Q9ULT8 2610 aa8.96□□□□□ -0.98
CDH3-202ENST00000429102 PAX4O43316 350 aa8.96□□□□□ -0.98
CDH3-202ENST00000429102 DEFB114Q30KQ6 69 aa8.95□□□□□ -0.98
CDH3-202ENST00000429102 LST1O00453 97 aa8.95□□□□□ -0.98
CDH3-202ENST00000429102 BRI3O95415 125 aa8.95□□□□□ -0.98
CDH3-202ENST00000429102 NTM-AS1Q6ZSK4 140 aa8.95□□□□□ -0.98
CDH3-202ENST00000429102 CITED1Q99966 193 aa8.95□□□□□ -0.98
CDH3-202ENST00000429102 TRGV4A0A0C4DH28 118 aa8.95□□□□□ -0.98
CDH3-202ENST00000429102 SLPIP03973 132 aa8.95□□□□□ -0.98
CDH3-202ENST00000429102 DAZ2Q13117 558 aaKnown RBP8.95□□□□□ -0.98
CDH3-202ENST00000429102 DAZ4Q86SG3 579 aaKnown RBP8.95□□□□□ -0.98
CDH3-202ENST00000429102 DAZ3Q9NR90 486 aaKnown RBP8.95□□□□□ -0.98
CDH3-202ENST00000429102 KLK5Q9Y337 293 aaPredicted RBP8.95□□□□□ -0.98
CDH3-202ENST00000429102 FASNP49327 2511 aaKnown RBP8.95□□□□□ -0.98
CDH3-202ENST00000429102 ODF3L2Q3SX64 289 aa8.94□□□□□ -0.98
CDH3-202ENST00000429102 MIR7-3HGQ8N6C7 128 aa8.94□□□□□ -0.98
CDH3-202ENST00000429102 C11orf72Q8NBR9 251 aa8.94□□□□□ -0.98
CDH3-202ENST00000429102 C1orf158Q8N1D5 194 aa8.94□□□□□ -0.98
CDH3-202ENST00000429102 HIST1H4AP62805 103 aaKnown RBP8.93□□□□□ -0.98
CDH3-202ENST00000429102 Q6YL49 198 aa8.93□□□□□ -0.98
CDH3-202ENST00000429102 FAM218AQ96MZ4 157 aa8.93□□□□□ -0.98
CDH3-202ENST00000429102 SHISA2Q6UWI4 295 aa8.93□□□□□ -0.98
CDH3-202ENST00000429102 SPANXDQ9BXN6 97 aa8.93□□□□□ -0.98
CDH3-202ENST00000429102 SPANXCQ9NY87 97 aa8.93□□□□□ -0.98
CDH3-202ENST00000429102 SMIM1B2RUZ4 78 aa8.92□□□□□ -0.98
CDH3-202ENST00000429102 CRPP02741 224 aa8.92□□□□□ -0.98
CDH3-202ENST00000429102 HERVK_113P63121 156 aa8.92□□□□□ -0.98
CDH3-202ENST00000429102 IGHV4-31P0DP07 118 aa8.92□□□□□ -0.98
CDH3-202ENST00000429102 UBR5O95071 2799 aaPredicted RBP8.92□□□□□ -0.98
CDH3-202ENST00000429102 SDIM1Q6ZPB5 146 aa8.92□□□□□ -0.98
CDH3-202ENST00000429102 C14orf132Q9NPU4 83 aa8.92□□□□□ -0.98
CDH3-202ENST00000429102 NDUFA1O15239 70 aa8.91□□□□□ -0.98
CDH3-202ENST00000429102 DEFB4AO15263 64 aa8.91□□□□□ -0.98
CDH3-202ENST00000429102 XCL1P47992 114 aa8.91□□□□□ -0.98
CDH3-202ENST00000429102 K7EQD1 137 aa8.9□□□□□ -0.98
CDH3-202ENST00000429102 VWFP04275 2813 aa8.9□□□□□ -0.99
CDH3-202ENST00000429102 IGLV4-60A0A075B6I1 120 aa8.9□□□□□ -0.99
CDH3-202ENST00000429102 H3BT86 120 aa8.9□□□□□ -0.99
CDH3-202ENST00000429102 PRR3P79522 188 aaKnown RBP8.9□□□□□ -0.99
CDH3-202ENST00000429102 IGLV10-54A0A075B6I4 117 aa8.89□□□□□ -0.99
CDH3-202ENST00000429102 CCL24O00175 119 aa8.89□□□□□ -0.99
CDH3-202ENST00000429102 TMEM243Q9BU79 118 aa8.89□□□□□ -0.99
CDH3-202ENST00000429102 SND1-IT1Q9HBX3 110 aa8.89□□□□□ -0.99
CDH3-202ENST00000429102 ATRQ13535 2644 aa8.89□□□□□ -0.99
CDH3-202ENST00000429102 COX7A2LO14548 114 aa8.88□□□□□ -0.99
CDH3-202ENST00000429102 SMCR5Q8TEV8 140 aa8.87□□□□□ -0.99
CDH3-202ENST00000429102 CDC42SE2Q9NRR3 84 aa8.87□□□□□ -0.99
CDH3-202ENST00000429102 LECT2O14960 151 aa8.87□□□□□ -0.99
CDH3-202ENST00000429102 C9orf129Q5T035 196 aaKnown RBP8.87□□□□□ -0.99
CDH3-202ENST00000429102 WFDC11Q8NEX6 87 aa8.87□□□□□ -0.99
CDH3-202ENST00000429102 A0A087WVE0 104 aa8.87□□□□□ -0.99
CDH3-202ENST00000429102 C6orf226Q5I0X4 101 aa8.87□□□□□ -0.99
CDH3-202ENST00000429102 HELZ2Q9BYK8 2649 aaKnown RBP8.87□□□□□ -0.99
CDH3-202ENST00000429102 LOC107984640A0A0U1RRK4 108 aa8.86□□□□□ -0.99
CDH3-202ENST00000429102 TIRAPP58753 221 aa8.86□□□□□ -0.99
CDH3-202ENST00000429102 A0A087WYN8 130 aa8.86□□□□□ -0.99
CDH3-202ENST00000429102 LINC00337Q8N6G1 96 aa8.86□□□□□ -0.99
CDH3-202ENST00000429102 NCR3O14931 201 aa8.86□□□□□ -0.99
CDH3-202ENST00000429102 WFDC9Q8NEX5 89 aa8.86□□□□□ -0.99
CDH3-202ENST00000429102 DSCR9P59020 149 aa8.85□□□□□ -0.99
CDH3-202ENST00000429102 LINC00526Q96FQ7 95 aa8.85□□□□□ -0.99
CDH3-202ENST00000429102 BBC3Q96PG8 261 aaPredicted RBP8.85□□□□□ -0.99
CDH3-202ENST00000429102 COX7B2Q8TF08 81 aa8.85□□□□□ -0.99
CDH3-202ENST00000429102 C4orf3Q8WVX3 66 aa8.85□□□□□ -0.99
CDH3-202ENST00000429102 DNAJC30Q96LL9 226 aa8.85□□□□□ -0.99
CDH3-202ENST00000429102 F8P00451 2351 aa8.84□□□□□ -0.99
CDH3-202ENST00000429102 TEP1Q99973 2627 aaKnown RBP8.84□□□□□ -0.99
CDH3-202ENST00000429102 HTN3P15516 51 aa8.84□□□□□ -0.99
CDH3-202ENST00000429102 UNC79Q9P2D8 2635 aa8.83□□□□□ -1
CDH3-202ENST00000429102 hADV29S1A0JD25 119 aa8.83□□□□□ -1
CDH3-202ENST00000429102 SMIM11BQ8TCY0 68 aa8.83□□□□□ -1
CDH3-202ENST00000429102 PPDPFQ9H3Y8 114 aa8.83□□□□□ -1
CDH3-202ENST00000429102 CR1P17927 2039 aa8.83□□□□□ -1
CDH3-202ENST00000429102 DNAJC9-AS1A6NH13 148 aa8.82□□□□□ -1
CDH3-202ENST00000429102 J3QLI3 93 aa8.82□□□□□ -1
CDH3-202ENST00000429102 BEAN1Q3B7T3 259 aa8.82□□□□□ -1
CDH3-202ENST00000429102 Q8N3U1 123 aa8.82□□□□□ -1
CDH3-202ENST00000429102 IGLV5-39A0A0G2JS06 123 aa8.81□□□□□ -1
CDH3-202ENST00000429102 A0A1B0GX51 115 aa8.81□□□□□ -1
CDH3-202ENST00000429102 CCL18P55774 89 aa8.81□□□□□ -1
CDH3-202ENST00000429102 A0A096LNT2 108 aa8.81□□□□□ -1
CDH3-202ENST00000429102 C9orf116Q5BN46 136 aaPredicted RBP8.81□□□□□ -1
CDH3-202ENST00000429102 CFAP161Q6P656 301 aa8.81□□□□□ -1
CDH3-202ENST00000429102 F5H768 121 aa8.8□□□□□ -1
CDH3-202ENST00000429102 MALP21145 153 aa8.8□□□□□ -1
CDH3-202ENST00000429102 DEFB113Q30KQ7 82 aa8.8□□□□□ -1
CDH3-202ENST00000429102 HIVEP1P15822 2718 aa8.79□□□□□ -1
CDH3-202ENST00000429102 IGKV2-28A0A075B6P5 120 aa8.79□□□□□ -1
CDH3-202ENST00000429102 IGKV2D-28P01615 120 aa8.79□□□□□ -1
CDH3-202ENST00000429102 PDZD2O15018 2839 aa8.79□□□□□ -1
CDH3-202ENST00000429102 A8MTW9 85 aa8.79□□□□□ -1
CDH3-202ENST00000429102 TIMM17BO60830 172 aa8.79□□□□□ -1
CDH3-202ENST00000429102 GYPEP15421 78 aa8.79□□□□□ -1
CDH3-202ENST00000429102 COPS9Q8WXC6 57 aa8.79□□□□□ -1
CDH3-202ENST00000429102 IGLV5-45A0A087WSX0 123 aa8.78□□□□□ -1
CDH3-202ENST00000429102 LINC00482Q8N8I6 264 aa8.78□□□□□ -1
CDH3-202ENST00000429102 TRAV13-2A0A0B4J235 113 aa8.78□□□□□ -1
CDH3-202ENST00000429102 LINC00643Q86TS7 51 aa8.77□□□□□ -1.01
CDH3-202ENST00000429102 INAFM2P0DMQ5 153 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms