RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 GCSHP23434 173 aa14.55□□□□□ -0.08
PTPN18-205ENST00000428843 HIGD2BQ4VC39 106 aa14.55□□□□□ -0.08
PTPN18-205ENST00000428843 IGHV3OR16-9A0A0B4J2B5 98 aa14.54□□□□□ -0.08
PTPN18-205ENST00000428843 MALP21145 153 aa14.54□□□□□ -0.08
PTPN18-205ENST00000428843 LINC00310P59036 64 aa14.54□□□□□ -0.08
PTPN18-205ENST00000428843 COX6A2Q02221 97 aa14.54□□□□□ -0.08
PTPN18-205ENST00000428843 HSBP1O75506 76 aa14.53□□□□□ -0.08
PTPN18-205ENST00000428843 SERF1AO75920 110 aa14.53□□□□□ -0.08
PTPN18-205ENST00000428843 GVQW2A0A096LPI5 108 aaPredicted RBP14.52□□□□□ -0.09
PTPN18-205ENST00000428843 KRTAP10-1P60331 282 aa14.52□□□□□ -0.09
PTPN18-205ENST00000428843 FAM19A3Q7Z5A8 133 aa14.52□□□□□ -0.09
PTPN18-205ENST00000428843 HIST1H2BKO60814 126 aa14.51□□□□□ -0.09
PTPN18-205ENST00000428843 HIST1H2BJP06899 126 aa14.51□□□□□ -0.09
PTPN18-205ENST00000428843 HIST1H2BOP23527 126 aa14.51□□□□□ -0.09
PTPN18-205ENST00000428843 HIST1H2BBP33778 126 aa14.51□□□□□ -0.09
PTPN18-205ENST00000428843 HIST1H2BDP58876 126 aa14.51□□□□□ -0.09
PTPN18-205ENST00000428843 HIST1H2BCP62807 126 aa14.51□□□□□ -0.09
PTPN18-205ENST00000428843 PMVKQ15126 192 aa14.51□□□□□ -0.09
PTPN18-205ENST00000428843 HIST2H2BEQ16778 126 aa14.51□□□□□ -0.09
PTPN18-205ENST00000428843 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.51□□□□□ -0.09
PTPN18-205ENST00000428843 FAM19A2Q8N3H0 131 aa14.51□□□□□ -0.09
PTPN18-205ENST00000428843 HIST1H2BHQ93079 126 aa14.51□□□□□ -0.09
PTPN18-205ENST00000428843 HIST1H2BNQ99877 126 aa14.51□□□□□ -0.09
PTPN18-205ENST00000428843 HIST1H2BMQ99879 126 aa14.51□□□□□ -0.09
PTPN18-205ENST00000428843 CST9LQ9H4G1 147 aa14.51□□□□□ -0.09
PTPN18-205ENST00000428843 ATP5LO75964 103 aa14.5□□□□□ -0.09
PTPN18-205ENST00000428843 LINC01620Q4KN68 170 aa14.5□□□□□ -0.09
PTPN18-205ENST00000428843 NUPR1O60356 82 aa14.49□□□□□ -0.09
PTPN18-205ENST00000428843 SLPIP03973 132 aa14.49□□□□□ -0.09
PTPN18-205ENST00000428843 CNBPP62633 177 aaKnown RBP14.49□□□□□ -0.09
PTPN18-205ENST00000428843 LRP1BQ9NZR2 4599 aa14.49□□□□□ -0.09
PTPN18-205ENST00000428843 A0A087WZ39 114 aa14.48□□□□□ -0.09
PTPN18-205ENST00000428843 A0A0J9YXV3 536 aa14.48□□□□□ -0.09
PTPN18-205ENST00000428843 APOMO95445 188 aa14.48□□□□□ -0.09
PTPN18-205ENST00000428843 SEC11AP67812 179 aa14.48□□□□□ -0.09
PTPN18-205ENST00000428843 LINC00526Q96FQ7 95 aa14.48□□□□□ -0.09
PTPN18-205ENST00000428843 NDUFA6P56556 154 aa14.47□□□□□ -0.09
PTPN18-205ENST00000428843 HERVK_113P63121 156 aa14.47□□□□□ -0.09
PTPN18-205ENST00000428843 ZNF561-AS1K7EIQ3 104 aa14.46□□□□□ -0.09
PTPN18-205ENST00000428843 GEMIN7Q9H840 131 aaKnown RBP14.46□□□□□ -0.09
PTPN18-205ENST00000428843 IGHV3-64A0A075B6Q5 118 aa14.45□□□□□ -0.1
PTPN18-205ENST00000428843 TINCRA0A1B0GVN0 87 aa14.45□□□□□ -0.1
PTPN18-205ENST00000428843 C9orf163Q8N9P6 203 aa14.45□□□□□ -0.1
PTPN18-205ENST00000428843 IFI27L1Q96BM0 104 aa14.45□□□□□ -0.1
PTPN18-205ENST00000428843 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.44□□□□□ -0.1
PTPN18-205ENST00000428843 ORAOV1Q8WV07 137 aa14.44□□□□□ -0.1
PTPN18-205ENST00000428843 IGLV4-69A0A075B6H9 119 aa14.43□□□□□ -0.1
PTPN18-205ENST00000428843 SPAG11BQ08648 103 aa14.43□□□□□ -0.1
PTPN18-205ENST00000428843 LINC01561Q8N1V8 128 aa14.43□□□□□ -0.1
PTPN18-205ENST00000428843 OR10D4PQ8NGN7 298 aa14.43□□□□□ -0.1
PTPN18-205ENST00000428843 CDKN2A-AS1Q9UH64 79 aa14.43□□□□□ -0.1
PTPN18-205ENST00000428843 LEPROTL1O95214 131 aa14.41□□□□□ -0.1
PTPN18-205ENST00000428843 LINC00469Q8N7U9 141 aa14.41□□□□□ -0.1
PTPN18-205ENST00000428843 IGLC3P0DOY3 106 aa14.4□□□□□ -0.1
PTPN18-205ENST00000428843 FAM30AQ9NZY2 134 aa14.4□□□□□ -0.1
PTPN18-205ENST00000428843 IGLV5-45A0A087WSX0 123 aa14.39□□□□□ -0.11
PTPN18-205ENST00000428843 CDK2AP2O75956 126 aa14.39□□□□□ -0.11
PTPN18-205ENST00000428843 SYCNQ0VAF6 134 aa14.39□□□□□ -0.11
PTPN18-205ENST00000428843 C2orf48Q96LS8 159 aa14.39□□□□□ -0.11
PTPN18-205ENST00000428843 FABP4P15090 132 aa14.38□□□□□ -0.11
PTPN18-205ENST00000428843 CARD19Q96LW7 228 aa14.38□□□□□ -0.11
PTPN18-205ENST00000428843 CAMK2N2Q96S95 79 aa14.38□□□□□ -0.11
PTPN18-205ENST00000428843 CHAC1Q9BUX1 264 aa14.38□□□□□ -0.11
PTPN18-205ENST00000428843 TRAV12-1A0A0B4J245 112 aa14.37□□□□□ -0.11
PTPN18-205ENST00000428843 SDIM1Q6ZPB5 146 aa14.37□□□□□ -0.11
PTPN18-205ENST00000428843 PACRGQ96M98 296 aaPredicted RBP14.37□□□□□ -0.11
PTPN18-205ENST00000428843 HSPB8Q9UJY1 196 aa14.37□□□□□ -0.11
PTPN18-205ENST00000428843 CHTOPQ9Y3Y2 248 aaKnown RBP14.37□□□□□ -0.11
PTPN18-205ENST00000428843 KIAA0087Q14695 138 aa14.36□□□□□ -0.11
PTPN18-205ENST00000428843 Q6ZRU5 148 aa14.36□□□□□ -0.11
PTPN18-205ENST00000428843 Q6ZSA8 131 aa14.36□□□□□ -0.11
PTPN18-205ENST00000428843 XGP55808 180 aa14.35□□□□□ -0.11
PTPN18-205ENST00000428843 COA6Q5JTJ3 125 aaKnown RBP14.35□□□□□ -0.11
PTPN18-205ENST00000428843 SMIM1B2RUZ4 78 aa14.34□□□□□ -0.11
PTPN18-205ENST00000428843 APOBP04114 4563 aaKnown RBP14.34□□□□□ -0.11
PTPN18-205ENST00000428843 C11orf86A6NJI1 115 aa14.33□□□□□ -0.12
PTPN18-205ENST00000428843 F8WDY8 70 aa14.33□□□□□ -0.12
PTPN18-205ENST00000428843 H0Y8G0 127 aa14.33□□□□□ -0.12
PTPN18-205ENST00000428843 ZNF22P17026 224 aaPredicted RBP14.33□□□□□ -0.12
PTPN18-205ENST00000428843 HAMPP81172 84 aa14.33□□□□□ -0.12
PTPN18-205ENST00000428843 TOMM7Q9P0U1 55 aa14.33□□□□□ -0.12
PTPN18-205ENST00000428843 DNAH8Q96JB1 4490 aa14.33□□□□□ -0.12
PTPN18-205ENST00000428843 KIAA1109Q2LD37 5005 aa14.32□□□□□ -0.12
PTPN18-205ENST00000428843 H3BRM9 83 aa14.32□□□□□ -0.12
PTPN18-205ENST00000428843 PRSS2P07478 247 aa14.32□□□□□ -0.12
PTPN18-205ENST00000428843 SPINK8P0C7L1 97 aa14.32□□□□□ -0.12
PTPN18-205ENST00000428843 MRPL35Q9NZE8 188 aaKnown RBP14.32□□□□□ -0.12
PTPN18-205ENST00000428843 F8VRH5 84 aa14.31□□□□□ -0.12
PTPN18-205ENST00000428843 NDUFA1O15239 70 aa14.31□□□□□ -0.12
PTPN18-205ENST00000428843 UNQ6190/PRO20217Q6UXQ8 127 aa14.31□□□□□ -0.12
PTPN18-205ENST00000428843 Q8IZM0 81 aa14.31□□□□□ -0.12
PTPN18-205ENST00000428843 C10orf25Q5T742 122 aa14.3□□□□□ -0.12
PTPN18-205ENST00000428843 ODF1Q14990 250 aa14.29□□□□□ -0.12
PTPN18-205ENST00000428843 C6orf226Q5I0X4 101 aa14.29□□□□□ -0.12
PTPN18-205ENST00000428843 C2orf82Q6UX34 121 aa14.29□□□□□ -0.12
PTPN18-205ENST00000428843 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.29□□□□□ -0.12
PTPN18-205ENST00000428843 PANO1I0J062 215 aa14.28□□□□□ -0.12
PTPN18-205ENST00000428843 RNF151Q2KHN1 245 aa14.28□□□□□ -0.12
PTPN18-205ENST00000428843 TMEM170BQ5T4T1 132 aa14.28□□□□□ -0.12
PTPN18-205ENST00000428843 RYR1P21817 5038 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms