RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 TIMM17AQ99595 171 aa6.54□□□□□ -1.36
HMGCLL1-206ENST00000428842 KIR2DL4Q99706 377 aa6.54□□□□□ -1.36
HMGCLL1-206ENST00000428842 TRAV10A0A0B4J240 114 aa6.54□□□□□ -1.36
HMGCLL1-206ENST00000428842 NHLRC4P0CG21 123 aaPredicted RBP6.54□□□□□ -1.36
HMGCLL1-206ENST00000428842 PAPPA-AS1Q5QFB9 102 aa6.54□□□□□ -1.36
HMGCLL1-206ENST00000428842 LYPD5Q6UWN5 251 aa6.54□□□□□ -1.36
HMGCLL1-206ENST00000428842 CHCHD5Q9BSY4 110 aa6.54□□□□□ -1.36
HMGCLL1-206ENST00000428842 C11orf86A6NJI1 115 aa6.53□□□□□ -1.36
HMGCLL1-206ENST00000428842 TMEM262E9PQX1 116 aa6.53□□□□□ -1.36
HMGCLL1-206ENST00000428842 IGHV3-30P01768 117 aa6.53□□□□□ -1.36
HMGCLL1-206ENST00000428842 IGHV3-33P01772 117 aa6.53□□□□□ -1.36
HMGCLL1-206ENST00000428842 IGHV3-30-3P0DP02 117 aa6.53□□□□□ -1.36
HMGCLL1-206ENST00000428842 IGHV3-30-5P0DP03 117 aa6.53□□□□□ -1.36
HMGCLL1-206ENST00000428842 COTL1Q14019 142 aa6.53□□□□□ -1.36
HMGCLL1-206ENST00000428842 PMVKQ15126 192 aa6.53□□□□□ -1.36
HMGCLL1-206ENST00000428842 DAZ4Q86SG3 579 aaKnown RBP6.52□□□□□ -1.36
HMGCLL1-206ENST00000428842 DAZ3Q9NR90 486 aaKnown RBP6.52□□□□□ -1.36
HMGCLL1-206ENST00000428842 ICOSQ9Y6W8 199 aa6.52□□□□□ -1.36
HMGCLL1-206ENST00000428842 TRBV6-8A0A0A6YYG3 113 aa6.52□□□□□ -1.37
HMGCLL1-206ENST00000428842 TRBV10-1A0A0K0K1A3 114 aa6.52□□□□□ -1.37
HMGCLL1-206ENST00000428842 ZNF815PA8K554 130 aa6.52□□□□□ -1.37
HMGCLL1-206ENST00000428842 Q6ZUT4 128 aa6.51□□□□□ -1.37
HMGCLL1-206ENST00000428842 PLEKHB2Q96CS7 222 aa6.51□□□□□ -1.37
HMGCLL1-206ENST00000428842 LINC00588Q9Y4M8 146 aa6.51□□□□□ -1.37
HMGCLL1-206ENST00000428842 IGLV10-54A0A075B6I4 117 aa6.51□□□□□ -1.37
HMGCLL1-206ENST00000428842 F8W1H4 67 aa6.51□□□□□ -1.37
HMGCLL1-206ENST00000428842 MRPL23Q16540 153 aaKnown RBP6.51□□□□□ -1.37
HMGCLL1-206ENST00000428842 C20orf203Q8NBC4 194 aa6.51□□□□□ -1.37
HMGCLL1-206ENST00000428842 GTSF1LQ9H1H1 148 aa6.51□□□□□ -1.37
HMGCLL1-206ENST00000428842 SACSQ9NZJ4 4579 aa6.51□□□□□ -1.37
HMGCLL1-206ENST00000428842 UBE2D1P51668 147 aa6.5□□□□□ -1.37
HMGCLL1-206ENST00000428842 HERVK_113P61574 105 aa6.5□□□□□ -1.37
HMGCLL1-206ENST00000428842 RYR3Q15413 4870 aa6.5□□□□□ -1.37
HMGCLL1-206ENST00000428842 TEX48A0A1B0GUV7 120 aa6.49□□□□□ -1.37
HMGCLL1-206ENST00000428842 TMEM238LA0A1B0GVL6 79 aa6.49□□□□□ -1.37
HMGCLL1-206ENST00000428842 NFE4Q86UQ8 179 aa6.49□□□□□ -1.37
HMGCLL1-206ENST00000428842 SPANXB1Q9NS25 103 aaPredicted RBP6.49□□□□□ -1.37
HMGCLL1-206ENST00000428842 KLK5Q9Y337 293 aaPredicted RBP6.49□□□□□ -1.37
HMGCLL1-206ENST00000428842 PRO0461Q9UI25 63 aa6.49□□□□□ -1.37
HMGCLL1-206ENST00000428842 APLNQ9ULZ1 77 aa6.49□□□□□ -1.37
HMGCLL1-206ENST00000428842 UBE2D4Q9Y2X8 147 aa6.49□□□□□ -1.37
HMGCLL1-206ENST00000428842 M0R2N4 97 aa6.48□□□□□ -1.37
HMGCLL1-206ENST00000428842 TSPEAR-AS2P59090 65 aa6.48□□□□□ -1.37
HMGCLL1-206ENST00000428842 SCGB1D4Q6XE38 83 aa6.48□□□□□ -1.37
HMGCLL1-206ENST00000428842 MUC7Q8TAX7 377 aa6.48□□□□□ -1.37
HMGCLL1-206ENST00000428842 AMELXQ99217 191 aa6.48□□□□□ -1.37
HMGCLL1-206ENST00000428842 KRTAP1-5Q9BYS1 174 aa6.48□□□□□ -1.37
HMGCLL1-206ENST00000428842 IGLV4-3A0A075B6K6 122 aa6.48□□□□□ -1.37
HMGCLL1-206ENST00000428842 TRAV13-1A0A0B4J241 112 aa6.48□□□□□ -1.37
HMGCLL1-206ENST00000428842 H3BMG7 143 aa6.48□□□□□ -1.37
HMGCLL1-206ENST00000428842 WFDC2Q14508 124 aa6.48□□□□□ -1.37
HMGCLL1-206ENST00000428842 LINC00269Q8N2A0 174 aa6.48□□□□□ -1.37
HMGCLL1-206ENST00000428842 TMEM243Q9BU79 118 aa6.48□□□□□ -1.37
HMGCLL1-206ENST00000428842 KLK12Q9UKR0 248 aa6.48□□□□□ -1.37
HMGCLL1-206ENST00000428842 RPL24P83731 157 aaKnown RBP6.47□□□□□ -1.37
HMGCLL1-206ENST00000428842 UBE2L6O14933 153 aa6.47□□□□□ -1.37
HMGCLL1-206ENST00000428842 SRSF9Q13242 221 aaKnown RBP eCLIP6.47□□□□□ -1.37
HMGCLL1-206ENST00000428842 Q9HAA7 133 aa6.47□□□□□ -1.37
HMGCLL1-206ENST00000428842 PGPEP1Q9NXJ5 209 aa6.47□□□□□ -1.37
HMGCLL1-206ENST00000428842 IGHV3-64A0A075B6Q5 118 aa6.46□□□□□ -1.38
HMGCLL1-206ENST00000428842 TMEM223A0PJW6 202 aa6.46□□□□□ -1.38
HMGCLL1-206ENST00000428842 ANGP03950 147 aaKnown RBP6.46□□□□□ -1.38
HMGCLL1-206ENST00000428842 CASC10Q5T4H9 136 aa6.46□□□□□ -1.38
HMGCLL1-206ENST00000428842 TMEM170BQ5T4T1 132 aa6.46□□□□□ -1.38
HMGCLL1-206ENST00000428842 J3QQQ9 107 aa6.46□□□□□ -1.38
HMGCLL1-206ENST00000428842 LEPROTO15243 131 aa6.46□□□□□ -1.38
HMGCLL1-206ENST00000428842 TSPAN13O95857 204 aa6.46□□□□□ -1.38
HMGCLL1-206ENST00000428842 DNAH6Q9C0G6 4158 aa6.45□□□□□ -1.38
HMGCLL1-206ENST00000428842 A0A0J9YXV3 536 aa6.45□□□□□ -1.38
HMGCLL1-206ENST00000428842 COX6A2Q02221 97 aa6.45□□□□□ -1.38
HMGCLL1-206ENST00000428842 DGAT2L7PQ6IED9 249 aa6.45□□□□□ -1.38
HMGCLL1-206ENST00000428842 CIDEAO60543 219 aa6.45□□□□□ -1.38
HMGCLL1-206ENST00000428842 ZNF22P17026 224 aaPredicted RBP6.45□□□□□ -1.38
HMGCLL1-206ENST00000428842 PYGO1Q9Y3Y4 419 aa6.45□□□□□ -1.38
HMGCLL1-206ENST00000428842 LELP1Q5T871 98 aa6.44□□□□□ -1.38
HMGCLL1-206ENST00000428842 WWC2-AS2Q96NR7 200 aa6.44□□□□□ -1.38
HMGCLL1-206ENST00000428842 CDC42SE2Q9NRR3 84 aa6.44□□□□□ -1.38
HMGCLL1-206ENST00000428842 HECTD4Q9Y4D8 3996 aa6.44□□□□□ -1.38
HMGCLL1-206ENST00000428842 PKHD1P08F94 4074 aa6.44□□□□□ -1.38
HMGCLL1-206ENST00000428842 CFC1BP0CG36 223 aa6.44□□□□□ -1.38
HMGCLL1-206ENST00000428842 CFC1P0CG37 223 aa6.44□□□□□ -1.38
HMGCLL1-206ENST00000428842 LGALS3P17931 250 aaKnown RBP6.44□□□□□ -1.38
HMGCLL1-206ENST00000428842 FUSP35637 526 aaKnown RBP eCLIP6.44□□□□□ -1.38
HMGCLL1-206ENST00000428842 ETDBQ3ZM63 59 aa6.44□□□□□ -1.38
HMGCLL1-206ENST00000428842 SH2D6Q7Z4S9 175 aa6.44□□□□□ -1.38
HMGCLL1-206ENST00000428842 UBE2DNLQ8IWF7 75 aa6.44□□□□□ -1.38
HMGCLL1-206ENST00000428842 LINC00526Q96FQ7 95 aa6.44□□□□□ -1.38
HMGCLL1-206ENST00000428842 RYR2Q92736 4967 aa6.43□□□□□ -1.38
HMGCLL1-206ENST00000428842 LY6G6CO95867 125 aa6.43□□□□□ -1.38
HMGCLL1-206ENST00000428842 XCL1P47992 114 aa6.43□□□□□ -1.38
HMGCLL1-206ENST00000428842 UBE2WQ96B02 151 aa6.43□□□□□ -1.38
HMGCLL1-206ENST00000428842 Q9H8V8 135 aa6.43□□□□□ -1.38
HMGCLL1-206ENST00000428842 J3QR89 54 aa6.42□□□□□ -1.38
HMGCLL1-206ENST00000428842 LECT2O14960 151 aa6.42□□□□□ -1.38
HMGCLL1-206ENST00000428842 APOMO95445 188 aa6.42□□□□□ -1.38
HMGCLL1-206ENST00000428842 SMCPP49901 116 aaPredicted RBP6.42□□□□□ -1.38
HMGCLL1-206ENST00000428842 ENHOQ6UWT2 76 aa6.42□□□□□ -1.38
HMGCLL1-206ENST00000428842 VCX2Q9H322 139 aa6.42□□□□□ -1.38
HMGCLL1-206ENST00000428842 NUPR2A6NF83 97 aa6.42□□□□□ -1.38
HMGCLL1-206ENST00000428842 H3BNG1 76 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms