RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 KLK5Q9Y337 293 aaPredicted RBP3.67□□□□□ -1.82
C9orf3-205ENST00000427193 TRAPPC1Q9Y5R8 145 aa3.67□□□□□ -1.82
C9orf3-205ENST00000427193 HMCN2Q8NDA2 5059 aa3.66□□□□□ -1.82
C9orf3-205ENST00000427193 TRBV7-3A0A075B6L6 115 aa3.66□□□□□ -1.82
C9orf3-205ENST00000427193 A0A096LPF7 62 aa3.66□□□□□ -1.82
C9orf3-205ENST00000427193 IGHV3-73A0A0B4J1V6 119 aa3.66□□□□□ -1.82
C9orf3-205ENST00000427193 TRAV10A0A0B4J240 114 aa3.66□□□□□ -1.82
C9orf3-205ENST00000427193 LOC100131303A0A0U1RQF7 123 aa3.66□□□□□ -1.82
C9orf3-205ENST00000427193 SDHAF1A6NFY7 115 aa3.66□□□□□ -1.82
C9orf3-205ENST00000427193 H7C1H1 209 aa3.66□□□□□ -1.82
C9orf3-205ENST00000427193 NCR2O95944 276 aa3.66□□□□□ -1.82
C9orf3-205ENST00000427193 PPP1R17O96001 155 aa3.66□□□□□ -1.82
C9orf3-205ENST00000427193 CKS2P33552 79 aa3.66□□□□□ -1.82
C9orf3-205ENST00000427193 OR10J3Q5JRS4 329 aa3.66□□□□□ -1.82
C9orf3-205ENST00000427193 FAM74A4Q5TZK3 123 aa3.66□□□□□ -1.82
C9orf3-205ENST00000427193 CEMP1Q6PRD7 247 aaPredicted RBP3.66□□□□□ -1.82
C9orf3-205ENST00000427193 NTM-AS1Q6ZSK4 140 aa3.66□□□□□ -1.82
C9orf3-205ENST00000427193 SMIM15Q7Z3B0 74 aa3.66□□□□□ -1.82
C9orf3-205ENST00000427193 FAM104AQ969W3 186 aa3.66□□□□□ -1.82
C9orf3-205ENST00000427193 PRELID3AQ96N28 172 aa3.66□□□□□ -1.82
C9orf3-205ENST00000427193 A0A096LNJ9 63 aa3.65□□□□□ -1.83
C9orf3-205ENST00000427193 DEFB131BA0A096LNP1 70 aa3.65□□□□□ -1.83
C9orf3-205ENST00000427193 K7EMI3 77 aa3.65□□□□□ -1.83
C9orf3-205ENST00000427193 SMIM17P0DL12 118 aa3.65□□□□□ -1.83
C9orf3-205ENST00000427193 SRIP30626 198 aa3.65□□□□□ -1.83
C9orf3-205ENST00000427193 SEC61GP60059 68 aa3.65□□□□□ -1.83
C9orf3-205ENST00000427193 ZNF56Q15929 161 aa3.65□□□□□ -1.83
C9orf3-205ENST00000427193 DAZ4Q86SG3 579 aaKnown RBP3.65□□□□□ -1.83
C9orf3-205ENST00000427193 SMIM2Q9BVW6 85 aa3.65□□□□□ -1.83
C9orf3-205ENST00000427193 GTSF1LQ9H1H1 148 aa3.65□□□□□ -1.83
C9orf3-205ENST00000427193 DAZ3Q9NR90 486 aaKnown RBP3.65□□□□□ -1.83
C9orf3-205ENST00000427193 APLNQ9ULZ1 77 aa3.65□□□□□ -1.83
C9orf3-205ENST00000427193 TRGV4A0A0C4DH28 118 aa3.64□□□□□ -1.83
C9orf3-205ENST00000427193 NUPR1O60356 82 aa3.64□□□□□ -1.83
C9orf3-205ENST00000427193 MGPP08493 103 aa3.64□□□□□ -1.83
C9orf3-205ENST00000427193 IQCJQ1A5X6 159 aa3.64□□□□□ -1.83
C9orf3-205ENST00000427193 Q8N8P6 123 aa3.64□□□□□ -1.83
C9orf3-205ENST00000427193 ZNRF2Q8NHG8 242 aa3.64□□□□□ -1.83
C9orf3-205ENST00000427193 PRADC1Q9BSG0 188 aa3.64□□□□□ -1.83
C9orf3-205ENST00000427193 CHCHD7Q9BUK0 85 aa3.64□□□□□ -1.83
C9orf3-205ENST00000427193 ST20Q9HBF5 79 aa3.64□□□□□ -1.83
C9orf3-205ENST00000427193 NXT2Q9NPJ8 142 aaKnown RBP3.64□□□□□ -1.83
C9orf3-205ENST00000427193 DNAH5Q8TE73 4624 aa3.64□□□□□ -1.83
C9orf3-205ENST00000427193 TRBV6-8A0A0A6YYG3 113 aa3.63□□□□□ -1.83
C9orf3-205ENST00000427193 F5H768 121 aa3.63□□□□□ -1.83
C9orf3-205ENST00000427193 I3L3M4 83 aa3.63□□□□□ -1.83
C9orf3-205ENST00000427193 G0S2P27469 103 aa3.63□□□□□ -1.83
C9orf3-205ENST00000427193 IFI27P40305 119 aaPredicted RBP3.63□□□□□ -1.83
C9orf3-205ENST00000427193 TCTAP57738 103 aa3.63□□□□□ -1.83
C9orf3-205ENST00000427193 MRPL23Q16540 153 aaKnown RBP3.63□□□□□ -1.83
C9orf3-205ENST00000427193 RNASEKQ6P5S7 137 aaKnown RBP3.63□□□□□ -1.83
C9orf3-205ENST00000427193 LYPD5Q6UWN5 251 aa3.63□□□□□ -1.83
C9orf3-205ENST00000427193 NIT1Q86X76 327 aa3.63□□□□□ -1.83
C9orf3-205ENST00000427193 C15orf53Q8NAA6 179 aa3.63□□□□□ -1.83
C9orf3-205ENST00000427193 CHCHD1Q96BP2 118 aaKnown RBP3.63□□□□□ -1.83
C9orf3-205ENST00000427193 PACRGQ96M98 296 aaPredicted RBP3.63□□□□□ -1.83
C9orf3-205ENST00000427193 UPK3BQ9BT76 320 aa3.63□□□□□ -1.83
C9orf3-205ENST00000427193 FLG2Q5D862 2391 aaPredicted RBP3.63□□□□□ -1.83
C9orf3-205ENST00000427193 FAT1Q14517 4588 aa3.62□□□□□ -1.83
C9orf3-205ENST00000427193 A0A0J9YY99 117 aa3.62□□□□□ -1.83
C9orf3-205ENST00000427193 IGIPA6NJ69 53 aa3.62□□□□□ -1.83
C9orf3-205ENST00000427193 C1orf196B1AJZ1 125 aa3.62□□□□□ -1.83
C9orf3-205ENST00000427193 TCAPO15273 167 aa3.62□□□□□ -1.83
C9orf3-205ENST00000427193 SERF1AO75920 110 aa3.62□□□□□ -1.83
C9orf3-205ENST00000427193 LINC00614P0C842 121 aa3.62□□□□□ -1.83
C9orf3-205ENST00000427193 PMCHP20382 165 aa3.62□□□□□ -1.83
C9orf3-205ENST00000427193 XGP55808 180 aa3.62□□□□□ -1.83
C9orf3-205ENST00000427193 ESRGQ1W209 222 aa3.62□□□□□ -1.83
C9orf3-205ENST00000427193 PDZD11Q5EBL8 140 aa3.62□□□□□ -1.83
C9orf3-205ENST00000427193 NEGR1Q7Z3B1 354 aa3.62□□□□□ -1.83
C9orf3-205ENST00000427193 MRPL52Q86TS9 123 aaKnown RBP3.62□□□□□ -1.83
C9orf3-205ENST00000427193 C20orf203Q8NBC4 194 aa3.62□□□□□ -1.83
C9orf3-205ENST00000427193 ATP6V0E2Q8NHE4 81 aa3.62□□□□□ -1.83
C9orf3-205ENST00000427193 MAP1LC3AQ9H492 121 aa3.62□□□□□ -1.83
C9orf3-205ENST00000427193 CSDC2Q9Y534 153 aaKnown RBP3.62□□□□□ -1.83
C9orf3-205ENST00000427193 ICOSQ9Y6W8 199 aa3.62□□□□□ -1.83
C9orf3-205ENST00000427193 RNF213Q63HN8 5207 aa3.61□□□□□ -1.83
C9orf3-205ENST00000427193 RAB5BP61020 215 aa3.61□□□□□ -1.83
C9orf3-205ENST00000427193 LAGE3Q14657 143 aa3.61□□□□□ -1.83
C9orf3-205ENST00000427193 TMEM97Q5BJF2 176 aa3.61□□□□□ -1.83
C9orf3-205ENST00000427193 LELP1Q5T871 98 aa3.61□□□□□ -1.83
C9orf3-205ENST00000427193 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.61□□□□□ -1.83
C9orf3-205ENST00000427193 TOMM6Q96B49 74 aa3.61□□□□□ -1.83
C9orf3-205ENST00000427193 TIMM21Q9BVV7 248 aa3.61□□□□□ -1.83
C9orf3-205ENST00000427193 VPS13BQ7Z7G8 4022 aa3.6□□□□□ -1.83
C9orf3-205ENST00000427193 IGHV1-24A0A0C4DH33 117 aa3.6□□□□□ -1.83
C9orf3-205ENST00000427193 IGHV3-38A0A0C4DH36 116 aa3.6□□□□□ -1.83
C9orf3-205ENST00000427193 LOC389332A0A1B0GUA5 103 aa3.6□□□□□ -1.83
C9orf3-205ENST00000427193 HTN3P15516 51 aa3.6□□□□□ -1.83
C9orf3-205ENST00000427193 FCER1GP30273 86 aa3.6□□□□□ -1.83
C9orf3-205ENST00000427193 VAMP3Q15836 100 aa3.6□□□□□ -1.83
C9orf3-205ENST00000427193 ORMDL2Q53FV1 153 aa3.6□□□□□ -1.83
C9orf3-205ENST00000427193 HIST3H2BBQ8N257 126 aa3.6□□□□□ -1.83
C9orf3-205ENST00000427193 KIR2DL4Q99706 377 aa3.6□□□□□ -1.83
C9orf3-205ENST00000427193 UBE2D4Q9Y2X8 147 aa3.6□□□□□ -1.83
C9orf3-205ENST00000427193 MRPS16Q9Y3D3 137 aaKnown RBP3.6□□□□□ -1.83
C9orf3-205ENST00000427193 LINC00588Q9Y4M8 146 aa3.6□□□□□ -1.83
C9orf3-205ENST00000427193 LINC01549A6NIU2 74 aa3.59□□□□□ -1.83
C9orf3-205ENST00000427193 IGLL5B9A064 214 aa3.59□□□□□ -1.83
C9orf3-205ENST00000427193 HBDP02042 147 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms