RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 SMAGPQ0VAQ4 97 aa4.88□□□□□ -1.63
LINC01049-201ENST00000426840 Q6ZUT4 128 aa4.88□□□□□ -1.63
LINC01049-201ENST00000426840 SPANXA1Q9NS26 97 aa4.88□□□□□ -1.63
LINC01049-201ENST00000426840 CYSLTR1Q9Y271 337 aa4.88□□□□□ -1.63
LINC01049-201ENST00000426840 DNAH5Q8TE73 4624 aa4.88□□□□□ -1.63
LINC01049-201ENST00000426840 ATP6V1G1O75348 118 aa4.87□□□□□ -1.63
LINC01049-201ENST00000426840 LINC00614P0C842 121 aa4.87□□□□□ -1.63
LINC01049-201ENST00000426840 RNASE13Q5GAN3 156 aaKnown RBP4.87□□□□□ -1.63
LINC01049-201ENST00000426840 FA2HQ7L5A8 372 aa4.87□□□□□ -1.63
LINC01049-201ENST00000426840 SPATA12Q7Z6I5 190 aa4.87□□□□□ -1.63
LINC01049-201ENST00000426840 CHCHD10Q8WYQ3 142 aaPredicted RBP4.87□□□□□ -1.63
LINC01049-201ENST00000426840 TOMM6Q96B49 74 aa4.87□□□□□ -1.63
LINC01049-201ENST00000426840 IGLV4-3A0A075B6K6 122 aa4.86□□□□□ -1.63
LINC01049-201ENST00000426840 A0A096LNJ9 63 aa4.86□□□□□ -1.63
LINC01049-201ENST00000426840 LECT2O14960 151 aa4.86□□□□□ -1.63
LINC01049-201ENST00000426840 G0S2P27469 103 aa4.86□□□□□ -1.63
LINC01049-201ENST00000426840 FUSP35637 526 aaKnown RBP eCLIP4.86□□□□□ -1.63
LINC01049-201ENST00000426840 Q8N814 137 aa4.86□□□□□ -1.63
LINC01049-201ENST00000426840 TRAV13-1A0A0B4J241 112 aa4.85□□□□□ -1.63
LINC01049-201ENST00000426840 C1orf196B1AJZ1 125 aa4.85□□□□□ -1.63
LINC01049-201ENST00000426840 USP17L23D6RBM5 183 aa4.85□□□□□ -1.63
LINC01049-201ENST00000426840 CCL25O15444 150 aa4.85□□□□□ -1.63
LINC01049-201ENST00000426840 NPSP0C0P6 89 aa4.85□□□□□ -1.63
LINC01049-201ENST00000426840 RAB5BP61020 215 aa4.85□□□□□ -1.63
LINC01049-201ENST00000426840 SS18Q15532 418 aa4.85□□□□□ -1.63
LINC01049-201ENST00000426840 ZC2HC1BQ5TFG8 222 aa4.85□□□□□ -1.63
LINC01049-201ENST00000426840 ERASQ7Z444 233 aa4.85□□□□□ -1.63
LINC01049-201ENST00000426840 TMEM141Q96I45 108 aa4.85□□□□□ -1.63
LINC01049-201ENST00000426840 AMELXQ99217 191 aa4.85□□□□□ -1.63
LINC01049-201ENST00000426840 TIMM17AQ99595 171 aa4.85□□□□□ -1.63
LINC01049-201ENST00000426840 LRP1BQ9NZR2 4599 aa4.84□□□□□ -1.63
LINC01049-201ENST00000426840 LINC01549A6NIU2 74 aa4.84□□□□□ -1.63
LINC01049-201ENST00000426840 XCL1P47992 114 aa4.84□□□□□ -1.63
LINC01049-201ENST00000426840 CD164L2Q6UWJ8 174 aa4.84□□□□□ -1.63
LINC01049-201ENST00000426840 LINC00173Q6ZV60 143 aa4.84□□□□□ -1.63
LINC01049-201ENST00000426840 NTN5Q8WTR8 489 aaPredicted RBP4.84□□□□□ -1.63
LINC01049-201ENST00000426840 SCGB3A1Q96QR1 104 aa4.84□□□□□ -1.63
LINC01049-201ENST00000426840 VCX2Q9H322 139 aa4.84□□□□□ -1.63
LINC01049-201ENST00000426840 HECTD4Q9Y4D8 3996 aa4.83□□□□□ -1.64
LINC01049-201ENST00000426840 IFITM10A6NMD0 228 aa4.83□□□□□ -1.64
LINC01049-201ENST00000426840 NUPR1O60356 82 aa4.83□□□□□ -1.64
LINC01049-201ENST00000426840 PRSS1P07477 247 aa4.83□□□□□ -1.64
LINC01049-201ENST00000426840 UBE2D1P51668 147 aa4.83□□□□□ -1.64
LINC01049-201ENST00000426840 COX6A2Q02221 97 aa4.83□□□□□ -1.64
LINC01049-201ENST00000426840 PMCHL1Q16048 86 aa4.83□□□□□ -1.64
LINC01049-201ENST00000426840 PDZD11Q5EBL8 140 aa4.83□□□□□ -1.64
LINC01049-201ENST00000426840 LINC00242Q5T6M2 205 aa4.83□□□□□ -1.64
LINC01049-201ENST00000426840 TEX43Q6ZNM6 134 aa4.83□□□□□ -1.64
LINC01049-201ENST00000426840 C15orf56Q8N910 161 aa4.83□□□□□ -1.64
LINC01049-201ENST00000426840 CHCHD1Q96BP2 118 aaKnown RBP4.83□□□□□ -1.64
LINC01049-201ENST00000426840 DNAH8Q96JB1 4490 aa4.82□□□□□ -1.64
LINC01049-201ENST00000426840 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.82□□□□□ -1.64
LINC01049-201ENST00000426840 IGHV3OR16-9A0A0B4J2B5 98 aa4.82□□□□□ -1.64
LINC01049-201ENST00000426840 HBDP02042 147 aa4.82□□□□□ -1.64
LINC01049-201ENST00000426840 C14orf177Q52M58 125 aa4.82□□□□□ -1.64
LINC01049-201ENST00000426840 PAPPA-AS1Q5QFB9 102 aa4.82□□□□□ -1.64
LINC01049-201ENST00000426840 CFAP161Q6P656 301 aa4.82□□□□□ -1.64
LINC01049-201ENST00000426840 Q6ZN92 141 aa4.82□□□□□ -1.64
LINC01049-201ENST00000426840 FAM19A3Q7Z5A8 133 aa4.82□□□□□ -1.64
LINC01049-201ENST00000426840 C5orf38Q86SI9 138 aa4.82□□□□□ -1.64
LINC01049-201ENST00000426840 BAGE3Q86Y29 109 aa4.82□□□□□ -1.64
LINC01049-201ENST00000426840 PKHD1P08F94 4074 aa4.81□□□□□ -1.64
LINC01049-201ENST00000426840 IGLV5-52A0A0A0MRZ9 124 aa4.81□□□□□ -1.64
LINC01049-201ENST00000426840 C16orf90A8MZG2 172 aa4.81□□□□□ -1.64
LINC01049-201ENST00000426840 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.81□□□□□ -1.64
LINC01049-201ENST00000426840 HIST1H2BKO60814 126 aa4.81□□□□□ -1.64
LINC01049-201ENST00000426840 SERF1AO75920 110 aa4.81□□□□□ -1.64
LINC01049-201ENST00000426840 HIST1H2BJP06899 126 aa4.81□□□□□ -1.64
LINC01049-201ENST00000426840 HIST1H2BOP23527 126 aa4.81□□□□□ -1.64
LINC01049-201ENST00000426840 HIST1H2BBP33778 126 aa4.81□□□□□ -1.64
LINC01049-201ENST00000426840 HIST1H2BDP58876 126 aa4.81□□□□□ -1.64
LINC01049-201ENST00000426840 KRTAP10-1P60331 282 aa4.81□□□□□ -1.64
LINC01049-201ENST00000426840 HIST1H2BCP62807 126 aa4.81□□□□□ -1.64
LINC01049-201ENST00000426840 HIST2H2BEQ16778 126 aa4.81□□□□□ -1.64
LINC01049-201ENST00000426840 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.81□□□□□ -1.64
LINC01049-201ENST00000426840 FAM19A2Q8N3H0 131 aa4.81□□□□□ -1.64
LINC01049-201ENST00000426840 HIST1H2BHQ93079 126 aa4.81□□□□□ -1.64
LINC01049-201ENST00000426840 HIST1H2BNQ99877 126 aa4.81□□□□□ -1.64
LINC01049-201ENST00000426840 HIST1H2BMQ99879 126 aa4.81□□□□□ -1.64
LINC01049-201ENST00000426840 CST9LQ9H4G1 147 aa4.81□□□□□ -1.64
LINC01049-201ENST00000426840 RYR1P21817 5038 aa4.8□□□□□ -1.64
LINC01049-201ENST00000426840 GVQW2A0A096LPI5 108 aaPredicted RBP4.8□□□□□ -1.64
LINC01049-201ENST00000426840 IGHV1-58A0A0C4DH39 117 aa4.8□□□□□ -1.64
LINC01049-201ENST00000426840 A0A0J9YXV3 536 aa4.8□□□□□ -1.64
LINC01049-201ENST00000426840 COX7A2LO14548 114 aa4.8□□□□□ -1.64
LINC01049-201ENST00000426840 HSBP1O75506 76 aa4.8□□□□□ -1.64
LINC01049-201ENST00000426840 PMVKQ15126 192 aa4.8□□□□□ -1.64
LINC01049-201ENST00000426840 HIGD2BQ4VC39 106 aa4.8□□□□□ -1.64
LINC01049-201ENST00000426840 C2orf88Q9BSF0 95 aa4.8□□□□□ -1.64
LINC01049-201ENST00000426840 KIAA1109Q2LD37 5005 aa4.8□□□□□ -1.64
LINC01049-201ENST00000426840 IGHV3-64A0A075B6Q5 118 aa4.79□□□□□ -1.64
LINC01049-201ENST00000426840 A0A087WZ39 114 aa4.79□□□□□ -1.64
LINC01049-201ENST00000426840 hDV102S1A0JD36 115 aa4.79□□□□□ -1.64
LINC01049-201ENST00000426840 TRIAP1O43715 76 aa4.79□□□□□ -1.64
LINC01049-201ENST00000426840 ATP5LO75964 103 aa4.79□□□□□ -1.64
LINC01049-201ENST00000426840 CNBPP62633 177 aaKnown RBP4.79□□□□□ -1.64
LINC01049-201ENST00000426840 LINC01620Q4KN68 170 aa4.79□□□□□ -1.64
LINC01049-201ENST00000426840 LINC01561Q8N1V8 128 aa4.79□□□□□ -1.64
LINC01049-201ENST00000426840 C9orf163Q8N9P6 203 aa4.79□□□□□ -1.64
LINC01049-201ENST00000426840 LINC00526Q96FQ7 95 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms