RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 SPINK8P0C7L1 97 aa10.27□□□□□ -0.77
GINS3-203ENST00000426538 XCL1P47992 114 aa10.27□□□□□ -0.77
GINS3-203ENST00000426538 PRR34Q9NV39 138 aa10.27□□□□□ -0.77
GINS3-203ENST00000426538 IGHV1-58A0A0C4DH39 117 aa10.26□□□□□ -0.77
GINS3-203ENST00000426538 LEPROTO15243 131 aa10.26□□□□□ -0.77
GINS3-203ENST00000426538 BOD1L2Q8IYS8 172 aa10.26□□□□□ -0.77
GINS3-203ENST00000426538 UBE2WQ96B02 151 aa10.26□□□□□ -0.77
GINS3-203ENST00000426538 IGLV10-54A0A075B6I4 117 aa10.25□□□□□ -0.77
GINS3-203ENST00000426538 TRAV8-3A0A0A6YYJ7 113 aa10.25□□□□□ -0.77
GINS3-203ENST00000426538 IGHV3OR16-9A0A0B4J2B5 98 aa10.25□□□□□ -0.77
GINS3-203ENST00000426538 DLEU1O43261 78 aa10.25□□□□□ -0.77
GINS3-203ENST00000426538 DNAH10OSP0CZ25 163 aa10.25□□□□□ -0.77
GINS3-203ENST00000426538 PLEKHB2Q96CS7 222 aa10.25□□□□□ -0.77
GINS3-203ENST00000426538 UPK3BQ9BT76 320 aa10.25□□□□□ -0.77
GINS3-203ENST00000426538 J3QQQ9 107 aa10.24□□□□□ -0.77
GINS3-203ENST00000426538 LGALS3P17931 250 aaKnown RBP10.24□□□□□ -0.77
GINS3-203ENST00000426538 HNRNPA3P51991 378 aaKnown RBP10.24□□□□□ -0.77
GINS3-203ENST00000426538 ENHOQ6UWT2 76 aa10.24□□□□□ -0.77
GINS3-203ENST00000426538 UBE2DNLQ8IWF7 75 aa10.24□□□□□ -0.77
GINS3-203ENST00000426538 CHCHD10Q8WYQ3 142 aaPredicted RBP10.24□□□□□ -0.77
GINS3-203ENST00000426538 TTTY13Q9BZ97 58 aa10.24□□□□□ -0.77
GINS3-203ENST00000426538 TRAV8-4A0A0B4J246 113 aa10.24□□□□□ -0.77
GINS3-203ENST00000426538 CD164L2Q6UWJ8 174 aa10.24□□□□□ -0.77
GINS3-203ENST00000426538 FBN3Q75N90 2809 aa10.23□□□□□ -0.77
GINS3-203ENST00000426538 MIAQ16674 131 aa10.23□□□□□ -0.77
GINS3-203ENST00000426538 C5orf38Q86SI9 138 aa10.23□□□□□ -0.77
GINS3-203ENST00000426538 Q9H8V8 135 aa10.23□□□□□ -0.77
GINS3-203ENST00000426538 A0A087WZ39 114 aa10.22□□□□□ -0.77
GINS3-203ENST00000426538 MYMXA0A1B0GTQ4 84 aa10.22□□□□□ -0.77
GINS3-203ENST00000426538 ZNF815PA8K554 130 aa10.22□□□□□ -0.77
GINS3-203ENST00000426538 MAPKAPK5-AS1Q8N8E1 139 aa10.22□□□□□ -0.77
GINS3-203ENST00000426538 TP73-AS1Q9UF72 201 aa10.22□□□□□ -0.77
GINS3-203ENST00000426538 SMIM1B2RUZ4 78 aa10.21□□□□□ -0.77
GINS3-203ENST00000426538 ZFAND6Q6FIF0 208 aa10.21□□□□□ -0.77
GINS3-203ENST00000426538 IGLV5-39A0A0G2JS06 123 aa10.2□□□□□ -0.78
GINS3-203ENST00000426538 COX7A2LO14548 114 aa10.2□□□□□ -0.78
GINS3-203ENST00000426538 TSPEAR-AS2P59090 65 aa10.2□□□□□ -0.78
GINS3-203ENST00000426538 C10orf126Q8N4M7 172 aa10.2□□□□□ -0.78
GINS3-203ENST00000426538 CSMD3Q7Z407 3707 aa10.2□□□□□ -0.78
GINS3-203ENST00000426538 MALP21145 153 aa10.19□□□□□ -0.78
GINS3-203ENST00000426538 SCGB1D4Q6XE38 83 aa10.19□□□□□ -0.78
GINS3-203ENST00000426538 MUC7Q8TAX7 377 aa10.19□□□□□ -0.78
GINS3-203ENST00000426538 GAGE12HA6NDE8 117 aa10.19□□□□□ -0.78
GINS3-203ENST00000426538 LINC00587B1AMM8 73 aa10.19□□□□□ -0.78
GINS3-203ENST00000426538 CTAG1AP78358 180 aa10.19□□□□□ -0.78
GINS3-203ENST00000426538 LINC01561Q8N1V8 128 aa10.19□□□□□ -0.78
GINS3-203ENST00000426538 WWC2-AS2Q96NR7 200 aa10.19□□□□□ -0.78
GINS3-203ENST00000426538 DNAH7Q8WXX0 4024 aa10.18□□□□□ -0.78
GINS3-203ENST00000426538 K7EP13 123 aa10.18□□□□□ -0.78
GINS3-203ENST00000426538 C1orf43Q9BWL3 253 aa10.18□□□□□ -0.78
GINS3-203ENST00000426538 NDUFA12Q9UI09 145 aa10.18□□□□□ -0.78
GINS3-203ENST00000426538 DYNC2H1Q8NCM8 4307 aaKnown RBP10.17□□□□□ -0.78
GINS3-203ENST00000426538 IBA57-AS1B1ANH7 110 aa10.17□□□□□ -0.78
GINS3-203ENST00000426538 FOXI1Q12951 378 aa10.17□□□□□ -0.78
GINS3-203ENST00000426538 C2orf91Q6ZV80 131 aa10.17□□□□□ -0.78
GINS3-203ENST00000426538 TOMM7Q9P0U1 55 aa10.17□□□□□ -0.78
GINS3-203ENST00000426538 COX7B2Q8TF08 81 aa10.16□□□□□ -0.78
GINS3-203ENST00000426538 HIGD1BQ9P298 99 aa10.16□□□□□ -0.78
GINS3-203ENST00000426538 IGKV2D-24A0A075B6R9 120 aa10.16□□□□□ -0.78
GINS3-203ENST00000426538 APOMO95445 188 aa10.16□□□□□ -0.78
GINS3-203ENST00000426538 Q9HAA7 133 aa10.16□□□□□ -0.78
GINS3-203ENST00000426538 PRSS2P07478 247 aa10.15□□□□□ -0.78
GINS3-203ENST00000426538 C6orf226Q5I0X4 101 aa10.15□□□□□ -0.78
GINS3-203ENST00000426538 ORAOV1Q8WV07 137 aa10.13□□□□□ -0.79
GINS3-203ENST00000426538 NDUFA1O15239 70 aa10.13□□□□□ -0.79
GINS3-203ENST00000426538 RMI2Q96E14 147 aa10.13□□□□□ -0.79
GINS3-203ENST00000426538 TGP01266 2768 aa10.12□□□□□ -0.79
GINS3-203ENST00000426538 Q8IZM0 81 aa10.12□□□□□ -0.79
GINS3-203ENST00000426538 LYSTQ99698 3801 aa10.12□□□□□ -0.79
GINS3-203ENST00000426538 A0A0J9YXY3 114 aa10.11□□□□□ -0.79
GINS3-203ENST00000426538 CFAP161Q6P656 301 aa10.11□□□□□ -0.79
GINS3-203ENST00000426538 HIST1H4GQ99525 98 aa10.11□□□□□ -0.79
GINS3-203ENST00000426538 PLECQ15149 4684 aaKnown RBP10.11□□□□□ -0.79
GINS3-203ENST00000426538 M0R143 59 aa10.1□□□□□ -0.79
GINS3-203ENST00000426538 HINT1P49773 126 aaPredicted RBP10.1□□□□□ -0.79
GINS3-203ENST00000426538 HERV-K104P63124 156 aa10.1□□□□□ -0.79
GINS3-203ENST00000426538 HSD52Q0P140 79 aa10.1□□□□□ -0.79
GINS3-203ENST00000426538 SRSF9Q13242 221 aaKnown RBP eCLIP10.1□□□□□ -0.79
GINS3-203ENST00000426538 KRTAP26-1Q6PEX3 210 aa10.1□□□□□ -0.79
GINS3-203ENST00000426538 SFTA2Q6UW10 78 aa10.1□□□□□ -0.79
GINS3-203ENST00000426538 CKS1BP61024 79 aa10.1□□□□□ -0.79
GINS3-203ENST00000426538 CIRBPQ14011 172 aaKnown RBP10.1□□□□□ -0.79
GINS3-203ENST00000426538 ZNF625Q96I27 306 aaPredicted RBP10.1□□□□□ -0.79
GINS3-203ENST00000426538 COX11Q9Y6N1 276 aa10.1□□□□□ -0.79
GINS3-203ENST00000426538 STARD9Q9P2P6 4700 aa10.09□□□□□ -0.79
GINS3-203ENST00000426538 TENM2Q9NT68 2774 aa10.09□□□□□ -0.79
GINS3-203ENST00000426538 TMEM238C9JI98 176 aa10.09□□□□□ -0.79
GINS3-203ENST00000426538 BATFQ16520 125 aa10.09□□□□□ -0.79
GINS3-203ENST00000426538 TAL2Q16559 108 aa10.08□□□□□ -0.8
GINS3-203ENST00000426538 TTC32Q5I0X7 151 aa10.08□□□□□ -0.8
GINS3-203ENST00000426538 CXCL5P42830 114 aa10.07□□□□□ -0.8
GINS3-203ENST00000426538 MEIG1Q5JSS6 88 aa10.07□□□□□ -0.8
GINS3-203ENST00000426538 C3orf84H3BNL1 204 aa10.07□□□□□ -0.8
GINS3-203ENST00000426538 SPAG11BQ08648 103 aa10.07□□□□□ -0.8
GINS3-203ENST00000426538 KIAA0087Q14695 138 aa10.07□□□□□ -0.8
GINS3-203ENST00000426538 CASC10Q5T4H9 136 aa10.07□□□□□ -0.8
GINS3-203ENST00000426538 TM2D2Q9BX73 214 aa10.07□□□□□ -0.8
GINS3-203ENST00000426538 SNHG12Q9BXW3 62 aa10.07□□□□□ -0.8
GINS3-203ENST00000426538 SPANXB1Q9NS25 103 aaPredicted RBP10.07□□□□□ -0.8
GINS3-203ENST00000426538 NBDYA0A0U1RRE5 68 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms