RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 AMN1Q8IY45 258 aa8.7□□□□□ -1.02
PDAP1-202ENST00000426447 C6orf48Q9UBA6 75 aa8.7□□□□□ -1.02
PDAP1-202ENST00000426447 ZNF861PO60384 105 aa8.69□□□□□ -1.02
PDAP1-202ENST00000426447 PPP1R17O96001 155 aa8.69□□□□□ -1.02
PDAP1-202ENST00000426447 FAM231DQ6ZW35 169 aa8.69□□□□□ -1.02
PDAP1-202ENST00000426447 TIMM21Q9BVV7 248 aa8.69□□□□□ -1.02
PDAP1-202ENST00000426447 SMDT1Q9H4I9 107 aa8.69□□□□□ -1.02
PDAP1-202ENST00000426447 FAT4Q6V0I7 4981 aa8.68□□□□□ -1.02
PDAP1-202ENST00000426447 SUMO2P61956 95 aaKnown RBP8.68□□□□□ -1.02
PDAP1-202ENST00000426447 KRTAP7-1Q8IUC3 87 aa8.68□□□□□ -1.02
PDAP1-202ENST00000426447 IGHV3OR16-9A0A0B4J2B5 98 aa8.67□□□□□ -1.02
PDAP1-202ENST00000426447 HIGD1CA8MV81 97 aa8.67□□□□□ -1.02
PDAP1-202ENST00000426447 CT83Q5H943 113 aa8.67□□□□□ -1.02
PDAP1-202ENST00000426447 PPP1R2P9O14990 202 aa8.65□□□□□ -1.02
PDAP1-202ENST00000426447 TYMSOSQ8TAI1 123 aa8.65□□□□□ -1.02
PDAP1-202ENST00000426447 IFITM10A6NMD0 228 aa8.64□□□□□ -1.03
PDAP1-202ENST00000426447 NDUFC2-KCTD14E9PQ53 114 aa8.64□□□□□ -1.03
PDAP1-202ENST00000426447 CEBPGP53567 150 aa8.64□□□□□ -1.03
PDAP1-202ENST00000426447 RAB14P61106 215 aa8.64□□□□□ -1.03
PDAP1-202ENST00000426447 RPL39P62891 51 aaKnown RBP8.64□□□□□ -1.03
PDAP1-202ENST00000426447 BLOC1S1P78537 153 aa8.64□□□□□ -1.03
PDAP1-202ENST00000426447 CLLU1Q5K131 121 aa8.64□□□□□ -1.03
PDAP1-202ENST00000426447 NRACQ8N912 160 aa8.64□□□□□ -1.03
PDAP1-202ENST00000426447 PACRGQ96M98 296 aaPredicted RBP8.64□□□□□ -1.03
PDAP1-202ENST00000426447 CDIP1Q9H305 208 aa8.64□□□□□ -1.03
PDAP1-202ENST00000426447 TGIF2-C20orf24A0A0A6YYL0 155 aa8.63□□□□□ -1.03
PDAP1-202ENST00000426447 TRBV30A0A0K0K1B3 111 aa8.63□□□□□ -1.03
PDAP1-202ENST00000426447 NUPR1O60356 82 aa8.63□□□□□ -1.03
PDAP1-202ENST00000426447 CRYGAP11844 174 aa8.63□□□□□ -1.03
PDAP1-202ENST00000426447 HBBP68871 147 aa8.63□□□□□ -1.03
PDAP1-202ENST00000426447 RIGQ13278 110 aa8.63□□□□□ -1.03
PDAP1-202ENST00000426447 C9orf129Q5T035 196 aaKnown RBP8.63□□□□□ -1.03
PDAP1-202ENST00000426447 A0A087X002 238 aa8.62□□□□□ -1.03
PDAP1-202ENST00000426447 TMEM250H0YL14 139 aa8.62□□□□□ -1.03
PDAP1-202ENST00000426447 TCAPO15273 167 aa8.62□□□□□ -1.03
PDAP1-202ENST00000426447 C2orf82Q6UX34 121 aa8.62□□□□□ -1.03
PDAP1-202ENST00000426447 CTDSP1Q9GZU7 261 aa8.62□□□□□ -1.03
PDAP1-202ENST00000426447 SPANXA1Q9NS26 97 aa8.62□□□□□ -1.03
PDAP1-202ENST00000426447 KIAA0087Q14695 138 aa8.61□□□□□ -1.03
PDAP1-202ENST00000426447 LBHQ53QV2 105 aaPredicted RBP8.61□□□□□ -1.03
PDAP1-202ENST00000426447 RETNLBQ9BQ08 111 aa8.61□□□□□ -1.03
PDAP1-202ENST00000426447 RPL28P46779 137 aaKnown RBP8.6□□□□□ -1.03
PDAP1-202ENST00000426447 MRPS36P82909 103 aaKnown RBP8.6□□□□□ -1.03
PDAP1-202ENST00000426447 C20orf78Q9BR46 151 aa8.6□□□□□ -1.03
PDAP1-202ENST00000426447 C22orf24Q9Y442 160 aa8.6□□□□□ -1.03
PDAP1-202ENST00000426447 MRPL51Q4U2R6 128 aaKnown RBP8.59□□□□□ -1.03
PDAP1-202ENST00000426447 FAM104AQ969W3 186 aa8.59□□□□□ -1.03
PDAP1-202ENST00000426447 CKS2P33552 79 aa8.58□□□□□ -1.04
PDAP1-202ENST00000426447 LINC00469Q8N7U9 141 aa8.58□□□□□ -1.04
PDAP1-202ENST00000426447 OSTCQ9NRP0 149 aa8.58□□□□□ -1.04
PDAP1-202ENST00000426447 LINC00862A6NCI5 91 aa8.57□□□□□ -1.04
PDAP1-202ENST00000426447 ZNF727A8MUV8 499 aa8.57□□□□□ -1.04
PDAP1-202ENST00000426447 FAM104BQ5XKR9 115 aa8.57□□□□□ -1.04
PDAP1-202ENST00000426447 LINC01551Q86U37 167 aa8.57□□□□□ -1.04
PDAP1-202ENST00000426447 TRBV24-1A0A075B6N3 115 aa8.56□□□□□ -1.04
PDAP1-202ENST00000426447 PRSS2P07478 247 aa8.56□□□□□ -1.04
PDAP1-202ENST00000426447 CKS1BP61024 79 aa8.56□□□□□ -1.04
PDAP1-202ENST00000426447 RPL32P62910 135 aaKnown RBP8.56□□□□□ -1.04
PDAP1-202ENST00000426447 LINC00242Q5T6M2 205 aa8.56□□□□□ -1.04
PDAP1-202ENST00000426447 SMIM7Q9BQ49 75 aa8.56□□□□□ -1.04
PDAP1-202ENST00000426447 ANAPC11Q9NYG5 84 aa8.56□□□□□ -1.04
PDAP1-202ENST00000426447 IGLV7-46A0A075B6I9 117 aa8.55□□□□□ -1.04
PDAP1-202ENST00000426447 BCE1O60756 84 aa8.55□□□□□ -1.04
PDAP1-202ENST00000426447 TNFRSF6BO95407 300 aa8.55□□□□□ -1.04
PDAP1-202ENST00000426447 IFI27P40305 119 aaPredicted RBP8.55□□□□□ -1.04
PDAP1-202ENST00000426447 SMIM2Q9BVW6 85 aa8.55□□□□□ -1.04
PDAP1-202ENST00000426447 XAGE1AQ9HD64 81 aa8.55□□□□□ -1.04
PDAP1-202ENST00000426447 NAT8BQ9UHF3 227 aa8.55□□□□□ -1.04
PDAP1-202ENST00000426447 TPRXLQ17RH7 258 aa8.54□□□□□ -1.04
PDAP1-202ENST00000426447 C6orf226Q5I0X4 101 aa8.54□□□□□ -1.04
PDAP1-202ENST00000426447 TOMM7Q9P0U1 55 aa8.54□□□□□ -1.04
PDAP1-202ENST00000426447 V9GYV3 84 aa8.54□□□□□ -1.04
PDAP1-202ENST00000426447 RAB5AP20339 215 aa8.53□□□□□ -1.04
PDAP1-202ENST00000426447 LINC00173Q6ZV60 143 aa8.53□□□□□ -1.04
PDAP1-202ENST00000426447 MRPL55Q7Z7F7 128 aaKnown RBP8.53□□□□□ -1.04
PDAP1-202ENST00000426447 LINC00304Q8N9R0 145 aa8.53□□□□□ -1.04
PDAP1-202ENST00000426447 EIF5A2Q9GZV4 153 aaKnown RBP8.53□□□□□ -1.04
PDAP1-202ENST00000426447 NDUFA5Q16718 116 aa8.52□□□□□ -1.05
PDAP1-202ENST00000426447 COMMD7Q86VX2 200 aa8.52□□□□□ -1.05
PDAP1-202ENST00000426447 RPL37AP8A6NKH3 93 aa8.51□□□□□ -1.05
PDAP1-202ENST00000426447 D6R8Y8 96 aa8.51□□□□□ -1.05
PDAP1-202ENST00000426447 SRSF3P84103 164 aaKnown RBP8.51□□□□□ -1.05
PDAP1-202ENST00000426447 KRTAP13-2Q52LG2 175 aa8.51□□□□□ -1.05
PDAP1-202ENST00000426447 Q6ZN92 141 aa8.51□□□□□ -1.05
PDAP1-202ENST00000426447 LINC01561Q8N1V8 128 aa8.51□□□□□ -1.05
PDAP1-202ENST00000426447 TMEM141Q96I45 108 aa8.51□□□□□ -1.05
PDAP1-202ENST00000426447 TP73-AS1Q9UF72 201 aa8.51□□□□□ -1.05
PDAP1-202ENST00000426447 IGLV4-3A0A075B6K6 122 aa8.5□□□□□ -1.05
PDAP1-202ENST00000426447 PEA15Q15121 130 aa8.5□□□□□ -1.05
PDAP1-202ENST00000426447 FAM74A3Q4VXF1 159 aa8.5□□□□□ -1.05
PDAP1-202ENST00000426447 UQCC3Q6UW78 93 aa8.5□□□□□ -1.05
PDAP1-202ENST00000426447 TEX43Q6ZNM6 134 aa8.5□□□□□ -1.05
PDAP1-202ENST00000426447 C2orf88Q9BSF0 95 aa8.5□□□□□ -1.05
PDAP1-202ENST00000426447 PYGO1Q9Y3Y4 419 aa8.5□□□□□ -1.05
PDAP1-202ENST00000426447 IGKV2D-26A0A0A0MRZ7 120 aa8.49□□□□□ -1.05
PDAP1-202ENST00000426447 A0A1B0GW15 77 aa8.49□□□□□ -1.05
PDAP1-202ENST00000426447 C9JQL5 133 aa8.49□□□□□ -1.05
PDAP1-202ENST00000426447 NPYP01303 97 aa8.49□□□□□ -1.05
PDAP1-202ENST00000426447 UBE2AP49459 152 aa8.49□□□□□ -1.05
PDAP1-202ENST00000426447 SLC7A5P1Q8MH63 180 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms