RNA–Protein interactions for RNA: ENST00000423960.1

FOXN4-203, Transcript of forkhead box N4, humanhuman

TSL 1 (best)

Gene FOXN4, Length 1,219 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-203ENST00000423960 LINC00310P59036 64 aa11.17□□□□□ -0.62
FOXN4-203ENST00000423960 KRTAP10-2P60368 255 aa11.17□□□□□ -0.62
FOXN4-203ENST00000423960 CFAP161Q6P656 301 aa11.17□□□□□ -0.62
FOXN4-203ENST00000423960 FAM19A2Q8N3H0 131 aa11.17□□□□□ -0.62
FOXN4-203ENST00000423960 NUPR1O60356 82 aa11.16□□□□□ -0.62
FOXN4-203ENST00000423960 CST9LQ9H4G1 147 aa11.16□□□□□ -0.62
FOXN4-203ENST00000423960 COX7A2LO14548 114 aa11.15□□□□□ -0.62
FOXN4-203ENST00000423960 PMVKQ15126 192 aa11.15□□□□□ -0.62
FOXN4-203ENST00000423960 LINC00242Q5T6M2 205 aa11.15□□□□□ -0.62
FOXN4-203ENST00000423960 C5orf38Q86SI9 138 aa11.15□□□□□ -0.62
FOXN4-203ENST00000423960 NTN5Q8WTR8 489 aaPredicted RBP11.15□□□□□ -0.62
FOXN4-203ENST00000423960 PCLOQ9Y6V0 5065 aa11.15□□□□□ -0.62
FOXN4-203ENST00000423960 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.14□□□□□ -0.63
FOXN4-203ENST00000423960 IGHV3OR16-9A0A0B4J2B5 98 aa11.14□□□□□ -0.63
FOXN4-203ENST00000423960 PRSS1P07477 247 aa11.14□□□□□ -0.63
FOXN4-203ENST00000423960 MALP21145 153 aa11.14□□□□□ -0.63
FOXN4-203ENST00000423960 FUSP35637 526 aaKnown RBP eCLIP11.14□□□□□ -0.63
FOXN4-203ENST00000423960 COX6A2Q02221 97 aa11.14□□□□□ -0.63
FOXN4-203ENST00000423960 FAM19A3Q7Z5A8 133 aa11.14□□□□□ -0.63
FOXN4-203ENST00000423960 IGHV1-58A0A0C4DH39 117 aa11.13□□□□□ -0.63
FOXN4-203ENST00000423960 C16orf90A8MZG2 172 aa11.13□□□□□ -0.63
FOXN4-203ENST00000423960 NDUFA6P56556 154 aa11.13□□□□□ -0.63
FOXN4-203ENST00000423960 SEC11AP67812 179 aa11.13□□□□□ -0.63
FOXN4-203ENST00000423960 CDPF1Q6NVV7 123 aa11.13□□□□□ -0.63
FOXN4-203ENST00000423960 C15orf56Q8N910 161 aa11.13□□□□□ -0.63
FOXN4-203ENST00000423960 KRTAP17-1Q9BYP8 105 aa11.13□□□□□ -0.63
FOXN4-203ENST00000423960 IGLV5-52A0A0A0MRZ9 124 aa11.12□□□□□ -0.63
FOXN4-203ENST00000423960 hDV102S1A0JD36 115 aa11.12□□□□□ -0.63
FOXN4-203ENST00000423960 RYR1P21817 5038 aa11.11□□□□□ -0.63
FOXN4-203ENST00000423960 A0A0J9YXV3 536 aa11.11□□□□□ -0.63
FOXN4-203ENST00000423960 IFI27L1Q96BM0 104 aa11.11□□□□□ -0.63
FOXN4-203ENST00000423960 DNAH5Q8TE73 4624 aa11.11□□□□□ -0.63
FOXN4-203ENST00000423960 LEPROTL1O95214 131 aa11.1□□□□□ -0.63
FOXN4-203ENST00000423960 APOMO95445 188 aa11.1□□□□□ -0.63
FOXN4-203ENST00000423960 HERVK_113P63121 156 aa11.1□□□□□ -0.63
FOXN4-203ENST00000423960 HIGD2BQ4VC39 106 aa11.1□□□□□ -0.63
FOXN4-203ENST00000423960 GEMIN7Q9H840 131 aaKnown RBP11.1□□□□□ -0.63
FOXN4-203ENST00000423960 A0A087WZ39 114 aa11.09□□□□□ -0.63
FOXN4-203ENST00000423960 GVQW2A0A096LPI5 108 aaPredicted RBP11.09□□□□□ -0.63
FOXN4-203ENST00000423960 TINCRA0A1B0GVN0 87 aa11.09□□□□□ -0.63
FOXN4-203ENST00000423960 COA6Q5JTJ3 125 aaKnown RBP11.09□□□□□ -0.63
FOXN4-203ENST00000423960 HSPB8Q9UJY1 196 aa11.09□□□□□ -0.63
FOXN4-203ENST00000423960 FABP4P15090 132 aa11.08□□□□□ -0.64
FOXN4-203ENST00000423960 ZNF561-AS1K7EIQ3 104 aa11.07□□□□□ -0.64
FOXN4-203ENST00000423960 GCSHP23434 173 aa11.07□□□□□ -0.64
FOXN4-203ENST00000423960 LINC01561Q8N1V8 128 aa11.07□□□□□ -0.64
FOXN4-203ENST00000423960 LRP1BQ9NZR2 4599 aa11.06□□□□□ -0.64
FOXN4-203ENST00000423960 IGHV3-64A0A075B6Q5 118 aa11.06□□□□□ -0.64
FOXN4-203ENST00000423960 TRAV12-1A0A0B4J245 112 aa11.06□□□□□ -0.64
FOXN4-203ENST00000423960 CDKN2A-AS1Q9UH64 79 aa11.06□□□□□ -0.64
FOXN4-203ENST00000423960 SLPIP03973 132 aa11.05□□□□□ -0.64
FOXN4-203ENST00000423960 CNBPP62633 177 aaKnown RBP11.05□□□□□ -0.64
FOXN4-203ENST00000423960 LINC00469Q8N7U9 141 aa11.05□□□□□ -0.64
FOXN4-203ENST00000423960 OR10D4PQ8NGN7 298 aa11.05□□□□□ -0.64
FOXN4-203ENST00000423960 LINC00526Q96FQ7 95 aa11.05□□□□□ -0.64
FOXN4-203ENST00000423960 IGLC3P0DOY3 106 aa11.04□□□□□ -0.64
FOXN4-203ENST00000423960 ORAOV1Q8WV07 137 aa11.04□□□□□ -0.64
FOXN4-203ENST00000423960 CHTOPQ9Y3Y2 248 aaKnown RBP11.04□□□□□ -0.64
FOXN4-203ENST00000423960 IGLV4-69A0A075B6H9 119 aa11.03□□□□□ -0.64
FOXN4-203ENST00000423960 IGLV5-45A0A087WSX0 123 aa11.03□□□□□ -0.64
FOXN4-203ENST00000423960 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.03□□□□□ -0.64
FOXN4-203ENST00000423960 SPAG11BQ08648 103 aa11.03□□□□□ -0.64
FOXN4-203ENST00000423960 PACRGQ96M98 296 aaPredicted RBP11.03□□□□□ -0.64
FOXN4-203ENST00000423960 HSPG2P98160 4391 aa11.02□□□□□ -0.65
FOXN4-203ENST00000423960 ABCA13Q86UQ4 5058 aa11.02□□□□□ -0.65
FOXN4-203ENST00000423960 H0Y8G0 127 aa11.02□□□□□ -0.65
FOXN4-203ENST00000423960 KRTAP10-1P60331 282 aa11.02□□□□□ -0.65
FOXN4-203ENST00000423960 C9orf163Q8N9P6 203 aa11.02□□□□□ -0.65
FOXN4-203ENST00000423960 CHAC1Q9BUX1 264 aa11.02□□□□□ -0.65
FOXN4-203ENST00000423960 H3BRM9 83 aa11.01□□□□□ -0.65
FOXN4-203ENST00000423960 LINC01620Q4KN68 170 aa11.01□□□□□ -0.65
FOXN4-203ENST00000423960 C2orf48Q96LS8 159 aa11.01□□□□□ -0.65
FOXN4-203ENST00000423960 MAP1LC3CQ9BXW4 147 aa11.01□□□□□ -0.65
FOXN4-203ENST00000423960 CDK2AP2O75956 126 aa11□□□□□ -0.65
FOXN4-203ENST00000423960 SYCNQ0VAF6 134 aa11□□□□□ -0.65
FOXN4-203ENST00000423960 MRPL35Q9NZE8 188 aaKnown RBP11□□□□□ -0.65
FOXN4-203ENST00000423960 C11orf86A6NJI1 115 aa10.99□□□□□ -0.65
FOXN4-203ENST00000423960 F8VRH5 84 aa10.99□□□□□ -0.65
FOXN4-203ENST00000423960 F8WDY8 70 aa10.99□□□□□ -0.65
FOXN4-203ENST00000423960 ZNF22P17026 224 aaPredicted RBP10.99□□□□□ -0.65
FOXN4-203ENST00000423960 KIAA0087Q14695 138 aa10.99□□□□□ -0.65
FOXN4-203ENST00000423960 ODF1Q14990 250 aa10.99□□□□□ -0.65
FOXN4-203ENST00000423960 CAMK2N2Q96S95 79 aa10.99□□□□□ -0.65
FOXN4-203ENST00000423960 KRTAP4-5Q9BYR2 181 aa10.99□□□□□ -0.65
FOXN4-203ENST00000423960 SMIM1B2RUZ4 78 aa10.98□□□□□ -0.65
FOXN4-203ENST00000423960 S100A6P06703 90 aa10.98□□□□□ -0.65
FOXN4-203ENST00000423960 PRSS2P07478 247 aa10.98□□□□□ -0.65
FOXN4-203ENST00000423960 SPINK8P0C7L1 97 aa10.98□□□□□ -0.65
FOXN4-203ENST00000423960 TMEM170BQ5T4T1 132 aa10.98□□□□□ -0.65
FOXN4-203ENST00000423960 CARD19Q96LW7 228 aa10.98□□□□□ -0.65
FOXN4-203ENST00000423960 TOMM7Q9P0U1 55 aa10.98□□□□□ -0.65
FOXN4-203ENST00000423960 APOBP04114 4563 aaKnown RBP10.98□□□□□ -0.65
FOXN4-203ENST00000423960 DNAH8Q96JB1 4490 aa10.97□□□□□ -0.65
FOXN4-203ENST00000423960 C6orf226Q5I0X4 101 aa10.97□□□□□ -0.65
FOXN4-203ENST00000423960 SDIM1Q6ZPB5 146 aa10.96□□□□□ -0.65
FOXN4-203ENST00000423960 Q6ZRU5 148 aa10.96□□□□□ -0.65
FOXN4-203ENST00000423960 Q8IZM0 81 aa10.96□□□□□ -0.65
FOXN4-203ENST00000423960 SYS1-DBNDD2H3BUS1 97 aa10.95□□□□□ -0.66
FOXN4-203ENST00000423960 NDUFA1O15239 70 aa10.95□□□□□ -0.66
FOXN4-203ENST00000423960 CKS1BP61024 79 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms