RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 LINC00242Q5T6M2 205 aa14.1□□□□□ -0.15
SEC22C-207ENST00000423701 C5orf38Q86SI9 138 aa14.1□□□□□ -0.15
SEC22C-207ENST00000423701 LINC01620Q4KN68 170 aa14.09□□□□□ -0.15
SEC22C-207ENST00000423701 BAGE3Q86Y29 109 aa14.09□□□□□ -0.15
SEC22C-207ENST00000423701 MALP21145 153 aa14.08□□□□□ -0.16
SEC22C-207ENST00000423701 CNBPP62633 177 aaKnown RBP14.07□□□□□ -0.16
SEC22C-207ENST00000423701 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.06□□□□□ -0.16
SEC22C-207ENST00000423701 SLPIP03973 132 aa14.06□□□□□ -0.16
SEC22C-207ENST00000423701 COX6A2Q02221 97 aa14.06□□□□□ -0.16
SEC22C-207ENST00000423701 PDZD11Q5EBL8 140 aa14.06□□□□□ -0.16
SEC22C-207ENST00000423701 KIAA1109Q2LD37 5005 aa14.06□□□□□ -0.16
SEC22C-207ENST00000423701 LINC00310P59036 64 aa14.05□□□□□ -0.16
SEC22C-207ENST00000423701 FAM19A3Q7Z5A8 133 aa14.05□□□□□ -0.16
SEC22C-207ENST00000423701 HSBP1O75506 76 aa14.04□□□□□ -0.16
SEC22C-207ENST00000423701 SERF1AO75920 110 aa14.04□□□□□ -0.16
SEC22C-207ENST00000423701 CDK2AP2O75956 126 aa14.03□□□□□ -0.16
SEC22C-207ENST00000423701 PMVKQ15126 192 aa14.03□□□□□ -0.16
SEC22C-207ENST00000423701 C9orf163Q8N9P6 203 aa14.03□□□□□ -0.16
SEC22C-207ENST00000423701 LINC00526Q96FQ7 95 aa14.03□□□□□ -0.16
SEC22C-207ENST00000423701 CST9LQ9H4G1 147 aa14.03□□□□□ -0.16
SEC22C-207ENST00000423701 A0A087WZ39 114 aa14.02□□□□□ -0.16
SEC22C-207ENST00000423701 APOMO95445 188 aa14.02□□□□□ -0.16
SEC22C-207ENST00000423701 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.01□□□□□ -0.17
SEC22C-207ENST00000423701 A0A0J9YXV3 536 aa14.01□□□□□ -0.17
SEC22C-207ENST00000423701 ZNF561-AS1K7EIQ3 104 aa14.01□□□□□ -0.17
SEC22C-207ENST00000423701 ATP5LO75964 103 aa14.01□□□□□ -0.17
SEC22C-207ENST00000423701 SEC11AP67812 179 aa14.01□□□□□ -0.17
SEC22C-207ENST00000423701 FAM19A2Q8N3H0 131 aa14.01□□□□□ -0.17
SEC22C-207ENST00000423701 HIST1H2BKO60814 126 aa14□□□□□ -0.17
SEC22C-207ENST00000423701 HIST1H2BJP06899 126 aa14□□□□□ -0.17
SEC22C-207ENST00000423701 HIST1H2BOP23527 126 aa14□□□□□ -0.17
SEC22C-207ENST00000423701 HIST1H2BBP33778 126 aa14□□□□□ -0.17
SEC22C-207ENST00000423701 HIST1H2BDP58876 126 aa14□□□□□ -0.17
SEC22C-207ENST00000423701 HIST1H2BCP62807 126 aa14□□□□□ -0.17
SEC22C-207ENST00000423701 HIST2H2BEQ16778 126 aa14□□□□□ -0.17
SEC22C-207ENST00000423701 HIST2H2BFQ5QNW6 126 aaPredicted RBP14□□□□□ -0.17
SEC22C-207ENST00000423701 HIST1H2BHQ93079 126 aa14□□□□□ -0.17
SEC22C-207ENST00000423701 HIST1H2BNQ99877 126 aa14□□□□□ -0.17
SEC22C-207ENST00000423701 HIST1H2BMQ99879 126 aa14□□□□□ -0.17
SEC22C-207ENST00000423701 IGLV4-69A0A075B6H9 119 aa13.99□□□□□ -0.17
SEC22C-207ENST00000423701 IGHV3-64A0A075B6Q5 118 aa13.99□□□□□ -0.17
SEC22C-207ENST00000423701 HERVK_113P63121 156 aa13.99□□□□□ -0.17
SEC22C-207ENST00000423701 GEMIN7Q9H840 131 aaKnown RBP13.99□□□□□ -0.17
SEC22C-207ENST00000423701 FAM30AQ9NZY2 134 aa13.99□□□□□ -0.17
SEC22C-207ENST00000423701 APOBP04114 4563 aaKnown RBP13.99□□□□□ -0.17
SEC22C-207ENST00000423701 SPAG11BQ08648 103 aa13.99□□□□□ -0.17
SEC22C-207ENST00000423701 OR10D4PQ8NGN7 298 aa13.99□□□□□ -0.17
SEC22C-207ENST00000423701 ORAOV1Q8WV07 137 aa13.99□□□□□ -0.17
SEC22C-207ENST00000423701 NUPR1O60356 82 aa13.98□□□□□ -0.17
SEC22C-207ENST00000423701 NDUFA6P56556 154 aa13.98□□□□□ -0.17
SEC22C-207ENST00000423701 Q6ZSA8 131 aa13.98□□□□□ -0.17
SEC22C-207ENST00000423701 TINCRA0A1B0GVN0 87 aa13.97□□□□□ -0.17
SEC22C-207ENST00000423701 CDKN2A-AS1Q9UH64 79 aa13.97□□□□□ -0.17
SEC22C-207ENST00000423701 XGP55808 180 aa13.96□□□□□ -0.17
SEC22C-207ENST00000423701 LINC01561Q8N1V8 128 aa13.96□□□□□ -0.17
SEC22C-207ENST00000423701 RYR1P21817 5038 aa13.96□□□□□ -0.18
SEC22C-207ENST00000423701 IFI27L1Q96BM0 104 aa13.95□□□□□ -0.18
SEC22C-207ENST00000423701 CARD19Q96LW7 228 aa13.95□□□□□ -0.18
SEC22C-207ENST00000423701 HAMPP81172 84 aa13.94□□□□□ -0.18
SEC22C-207ENST00000423701 SYCNQ0VAF6 134 aa13.94□□□□□ -0.18
SEC22C-207ENST00000423701 SDIM1Q6ZPB5 146 aa13.94□□□□□ -0.18
SEC22C-207ENST00000423701 LINC00469Q8N7U9 141 aa13.94□□□□□ -0.18
SEC22C-207ENST00000423701 C2orf48Q96LS8 159 aa13.94□□□□□ -0.18
SEC22C-207ENST00000423701 IGLV5-45A0A087WSX0 123 aa13.93□□□□□ -0.18
SEC22C-207ENST00000423701 CAMK2N2Q96S95 79 aa13.93□□□□□ -0.18
SEC22C-207ENST00000423701 IGLC3P0DOY3 106 aa13.93□□□□□ -0.18
SEC22C-207ENST00000423701 Q6ZRU5 148 aa13.93□□□□□ -0.18
SEC22C-207ENST00000423701 CHAC1Q9BUX1 264 aa13.92□□□□□ -0.18
SEC22C-207ENST00000423701 LEPROTL1O95214 131 aa13.91□□□□□ -0.18
SEC22C-207ENST00000423701 KIAA0087Q14695 138 aa13.91□□□□□ -0.18
SEC22C-207ENST00000423701 PACRGQ96M98 296 aaPredicted RBP13.91□□□□□ -0.18
SEC22C-207ENST00000423701 HSPG2P98160 4391 aa13.91□□□□□ -0.18
SEC22C-207ENST00000423701 HERC2O95714 4834 aa13.9□□□□□ -0.18
SEC22C-207ENST00000423701 DNAH8Q96JB1 4490 aa13.89□□□□□ -0.19
SEC22C-207ENST00000423701 TRAV12-1A0A0B4J245 112 aa13.88□□□□□ -0.19
SEC22C-207ENST00000423701 SMIM1B2RUZ4 78 aa13.88□□□□□ -0.19
SEC22C-207ENST00000423701 F8WDY8 70 aa13.88□□□□□ -0.19
SEC22C-207ENST00000423701 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.88□□□□□ -0.19
SEC22C-207ENST00000423701 PANO1I0J062 215 aa13.87□□□□□ -0.19
SEC22C-207ENST00000423701 NDUFA1O15239 70 aa13.87□□□□□ -0.19
SEC22C-207ENST00000423701 TOMM7Q9P0U1 55 aa13.87□□□□□ -0.19
SEC22C-207ENST00000423701 CHTOPQ9Y3Y2 248 aaKnown RBP13.87□□□□□ -0.19
SEC22C-207ENST00000423701 C11orf86A6NJI1 115 aa13.87□□□□□ -0.19
SEC22C-207ENST00000423701 FABP4P15090 132 aa13.87□□□□□ -0.19
SEC22C-207ENST00000423701 ZNF22P17026 224 aaPredicted RBP13.87□□□□□ -0.19
SEC22C-207ENST00000423701 SCXQ7RTU7 201 aa13.87□□□□□ -0.19
SEC22C-207ENST00000423701 HSPB8Q9UJY1 196 aa13.87□□□□□ -0.19
SEC22C-207ENST00000423701 PRSS2P07478 247 aa13.86□□□□□ -0.19
SEC22C-207ENST00000423701 SPINK8P0C7L1 97 aa13.86□□□□□ -0.19
SEC22C-207ENST00000423701 CHTF8P0CG12 524 aa13.86□□□□□ -0.19
SEC22C-207ENST00000423701 C10orf25Q5T742 122 aa13.86□□□□□ -0.19
SEC22C-207ENST00000423701 Q8IZM0 81 aa13.86□□□□□ -0.19
SEC22C-207ENST00000423701 MRPL35Q9NZE8 188 aaKnown RBP13.86□□□□□ -0.19
SEC22C-207ENST00000423701 H3BRM9 83 aa13.85□□□□□ -0.19
SEC22C-207ENST00000423701 COA6Q5JTJ3 125 aaKnown RBP13.85□□□□□ -0.19
SEC22C-207ENST00000423701 C2orf82Q6UX34 121 aa13.85□□□□□ -0.19
SEC22C-207ENST00000423701 UNQ6190/PRO20217Q6UXQ8 127 aa13.85□□□□□ -0.19
SEC22C-207ENST00000423701 F8VRH5 84 aa13.84□□□□□ -0.19
SEC22C-207ENST00000423701 H0Y8G0 127 aa13.84□□□□□ -0.19
SEC22C-207ENST00000423701 CIRBPQ14011 172 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms