RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 XCL1P47992 114 aa8.41□□□□□ -1.06
PTPRN-204ENST00000423636 UBE2D3P61077 147 aa8.41□□□□□ -1.06
PTPRN-204ENST00000423636 UBE2D2P62837 147 aa8.41□□□□□ -1.06
PTPRN-204ENST00000423636 LINC00526Q96FQ7 95 aa8.41□□□□□ -1.06
PTPRN-204ENST00000423636 PFN2P35080 140 aa8.41□□□□□ -1.06
PTPRN-204ENST00000423636 PRIMA1Q86XR5 153 aa8.41□□□□□ -1.06
PTPRN-204ENST00000423636 RETNQ9HD89 108 aa8.41□□□□□ -1.06
PTPRN-204ENST00000423636 FHL2Q14192 279 aa8.4□□□□□ -1.06
PTPRN-204ENST00000423636 C9JAW5 83 aa8.4□□□□□ -1.07
PTPRN-204ENST00000423636 C16orf74Q96GX8 76 aa8.4□□□□□ -1.07
PTPRN-204ENST00000423636 TMEM243Q9BU79 118 aa8.4□□□□□ -1.07
PTPRN-204ENST00000423636 SPANXA1Q9NS26 97 aa8.39□□□□□ -1.07
PTPRN-204ENST00000423636 ERG28Q9UKR5 140 aa8.39□□□□□ -1.07
PTPRN-204ENST00000423636 PYGO1Q9Y3Y4 419 aa8.39□□□□□ -1.07
PTPRN-204ENST00000423636 TEX29Q8N6K0 151 aa8.39□□□□□ -1.07
PTPRN-204ENST00000423636 LITAFQ99732 161 aa8.39□□□□□ -1.07
PTPRN-204ENST00000423636 CELA1Q9UNI1 258 aa8.39□□□□□ -1.07
PTPRN-204ENST00000423636 TINCRA0A1B0GVN0 87 aa8.39□□□□□ -1.07
PTPRN-204ENST00000423636 G3V4G9 280 aa8.39□□□□□ -1.07
PTPRN-204ENST00000423636 SPANXB1Q9NS25 103 aaPredicted RBP8.39□□□□□ -1.07
PTPRN-204ENST00000423636 TENM2Q9NT68 2774 aa8.38□□□□□ -1.07
PTPRN-204ENST00000423636 CDC42SE2Q9NRR3 84 aa8.38□□□□□ -1.07
PTPRN-204ENST00000423636 IL17DQ8TAD2 202 aa8.38□□□□□ -1.07
PTPRN-204ENST00000423636 IGHV3-33P01772 117 aa8.37□□□□□ -1.07
PTPRN-204ENST00000423636 SMIM1B2RUZ4 78 aa8.37□□□□□ -1.07
PTPRN-204ENST00000423636 TRIAP1O43715 76 aa8.37□□□□□ -1.07
PTPRN-204ENST00000423636 PRO0461Q9UI25 63 aa8.37□□□□□ -1.07
PTPRN-204ENST00000423636 C2orf82Q6UX34 121 aa8.36□□□□□ -1.07
PTPRN-204ENST00000423636 CLUHP3Q96NS8 147 aa8.36□□□□□ -1.07
PTPRN-204ENST00000423636 DAZ2Q13117 558 aaKnown RBP8.36□□□□□ -1.07
PTPRN-204ENST00000423636 SOSTDC1Q6X4U4 206 aa8.36□□□□□ -1.07
PTPRN-204ENST00000423636 X6R8D5 127 aa8.36□□□□□ -1.07
PTPRN-204ENST00000423636 F5H768 121 aa8.36□□□□□ -1.07
PTPRN-204ENST00000423636 C1QTNF4Q9BXJ3 329 aa8.36□□□□□ -1.07
PTPRN-204ENST00000423636 RPL13AP40429 203 aaKnown RBP8.35□□□□□ -1.07
PTPRN-204ENST00000423636 DAZ4Q86SG3 579 aaKnown RBP8.35□□□□□ -1.07
PTPRN-204ENST00000423636 DAZ3Q9NR90 486 aaKnown RBP8.35□□□□□ -1.07
PTPRN-204ENST00000423636 TRAV26-1A0A087WT03 109 aa8.35□□□□□ -1.07
PTPRN-204ENST00000423636 IGHV4-28A0A0C4DH34 117 aa8.34□□□□□ -1.07
PTPRN-204ENST00000423636 TRBV6-8A0A0A6YYG3 113 aa8.34□□□□□ -1.07
PTPRN-204ENST00000423636 F8W1H4 67 aa8.33□□□□□ -1.08
PTPRN-204ENST00000423636 PAX4O43316 350 aa8.33□□□□□ -1.08
PTPRN-204ENST00000423636 LINC00158P58513 81 aa8.33□□□□□ -1.08
PTPRN-204ENST00000423636 PRR3P79522 188 aaKnown RBP8.33□□□□□ -1.08
PTPRN-204ENST00000423636 ZFAND6Q6FIF0 208 aa8.33□□□□□ -1.08
PTPRN-204ENST00000423636 ANKRD29Q8N6D5 301 aa8.33□□□□□ -1.08
PTPRN-204ENST00000423636 ATP6V0E2Q8NHE4 81 aa8.33□□□□□ -1.08
PTPRN-204ENST00000423636 J3QR89 54 aa8.32□□□□□ -1.08
PTPRN-204ENST00000423636 LINC00269Q8N2A0 174 aa8.32□□□□□ -1.08
PTPRN-204ENST00000423636 HERVK_113P63121 156 aa8.32□□□□□ -1.08
PTPRN-204ENST00000423636 MIAQ16674 131 aa8.32□□□□□ -1.08
PTPRN-204ENST00000423636 C9orf116Q5BN46 136 aaPredicted RBP8.32□□□□□ -1.08
PTPRN-204ENST00000423636 TRBV10-1A0A0K0K1A3 114 aa8.31□□□□□ -1.08
PTPRN-204ENST00000423636 CYSRT1A8MQ03 144 aa8.31□□□□□ -1.08
PTPRN-204ENST00000423636 SBSPONQ8IVN8 264 aa8.31□□□□□ -1.08
PTPRN-204ENST00000423636 CARD19Q96LW7 228 aa8.31□□□□□ -1.08
PTPRN-204ENST00000423636 TEX49A0A1B0GTD5 131 aa8.31□□□□□ -1.08
PTPRN-204ENST00000423636 MIR7-3HGQ8N6C7 128 aa8.31□□□□□ -1.08
PTPRN-204ENST00000423636 SIGMAR1Q99720 223 aa8.31□□□□□ -1.08
PTPRN-204ENST00000423636 ANGP03950 147 aaKnown RBP8.31□□□□□ -1.08
PTPRN-204ENST00000423636 IGHV4-30-4P0DP06 118 aa8.31□□□□□ -1.08
PTPRN-204ENST00000423636 LINC00308Q8TCZ7 52 aa8.31□□□□□ -1.08
PTPRN-204ENST00000423636 NTN5Q8WTR8 489 aaPredicted RBP8.31□□□□□ -1.08
PTPRN-204ENST00000423636 TRBV6-4A0A1B0GX49 114 aa8.3□□□□□ -1.08
PTPRN-204ENST00000423636 SLC25A20O43772 301 aa8.3□□□□□ -1.08
PTPRN-204ENST00000423636 DAD1P61803 113 aa8.3□□□□□ -1.08
PTPRN-204ENST00000423636 EDA2RQ9HAV5 297 aa8.3□□□□□ -1.08
PTPRN-204ENST00000423636 ICOSQ9Y6W8 199 aa8.29□□□□□ -1.08
PTPRN-204ENST00000423636 GAGE12HA6NDE8 117 aa8.29□□□□□ -1.08
PTPRN-204ENST00000423636 CRYBA4P53673 196 aa8.29□□□□□ -1.08
PTPRN-204ENST00000423636 OVOL2Q9BRP0 275 aa8.29□□□□□ -1.08
PTPRN-204ENST00000423636 FOXI1Q12951 378 aa8.28□□□□□ -1.08
PTPRN-204ENST00000423636 C9orf66Q5T8R8 295 aa8.28□□□□□ -1.08
PTPRN-204ENST00000423636 LYSTQ99698 3801 aa8.28□□□□□ -1.08
PTPRN-204ENST00000423636 STAB2Q8WWQ8 2551 aa8.28□□□□□ -1.08
PTPRN-204ENST00000423636 TIRAPP58753 221 aa8.28□□□□□ -1.08
PTPRN-204ENST00000423636 CIRBPQ14011 172 aaKnown RBP8.28□□□□□ -1.08
PTPRN-204ENST00000423636 Q9HAA7 133 aa8.28□□□□□ -1.08
PTPRN-204ENST00000423636 NDUFA1O15239 70 aa8.28□□□□□ -1.08
PTPRN-204ENST00000423636 C6orf226Q5I0X4 101 aa8.28□□□□□ -1.08
PTPRN-204ENST00000423636 OR13C6PQ8NH95 151 aa8.28□□□□□ -1.08
PTPRN-204ENST00000423636 MRAPQ8TCY5 172 aa8.27□□□□□ -1.09
PTPRN-204ENST00000423636 COX7B2Q8TF08 81 aa8.27□□□□□ -1.09
PTPRN-204ENST00000423636 LINC00959A0A1B0GUT2 108 aa8.26□□□□□ -1.09
PTPRN-204ENST00000423636 ATP5G1P05496 136 aa8.26□□□□□ -1.09
PTPRN-204ENST00000423636 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.26□□□□□ -1.09
PTPRN-204ENST00000423636 CKS1BP61024 79 aa8.26□□□□□ -1.09
PTPRN-204ENST00000423636 C6orf223Q8N319 242 aa8.26□□□□□ -1.09
PTPRN-204ENST00000423636 PRO0255Q9UI72 69 aa8.26□□□□□ -1.09
PTPRN-204ENST00000423636 IGLV5-39A0A0G2JS06 123 aa8.25□□□□□ -1.09
PTPRN-204ENST00000423636 CMC4P56277 68 aaPredicted RBP8.25□□□□□ -1.09
PTPRN-204ENST00000423636 LINC01620Q4KN68 170 aa8.25□□□□□ -1.09
PTPRN-204ENST00000423636 MT-ATP8P03928 68 aa8.25□□□□□ -1.09
PTPRN-204ENST00000423636 KRTAP10-11P60412 298 aa8.25□□□□□ -1.09
PTPRN-204ENST00000423636 KLK12Q9UKR0 248 aa8.25□□□□□ -1.09
PTPRN-204ENST00000423636 A0A0B4J2C4 111 aa8.24□□□□□ -1.09
PTPRN-204ENST00000423636 IGLV5-45A0A087WSX0 123 aa8.24□□□□□ -1.09
PTPRN-204ENST00000423636 IGHV3OR16-9A0A0B4J2B5 98 aa8.24□□□□□ -1.09
PTPRN-204ENST00000423636 CITED1Q99966 193 aa8.23□□□□□ -1.09
PTPRN-204ENST00000423636 KRTAP24-1Q3LI83 254 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms