RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 TRAV12-1A0A0B4J245 112 aa6.63□□□□□ -1.35
HDLBP-209ENST00000422933 IGHV1-58A0A0C4DH39 117 aa6.63□□□□□ -1.35
HDLBP-209ENST00000422933 TINCRA0A1B0GVN0 87 aa6.63□□□□□ -1.35
HDLBP-209ENST00000422933 H0Y8G0 127 aa6.63□□□□□ -1.35
HDLBP-209ENST00000422933 ZNF561-AS1K7EIQ3 104 aa6.63□□□□□ -1.35
HDLBP-209ENST00000422933 NUPR1O60356 82 aa6.63□□□□□ -1.35
HDLBP-209ENST00000422933 CHTOPQ9Y3Y2 248 aaKnown RBP6.63□□□□□ -1.35
HDLBP-209ENST00000422933 hDV102S1A0JD36 115 aa6.62□□□□□ -1.35
HDLBP-209ENST00000422933 USP17L23D6RBM5 183 aa6.62□□□□□ -1.35
HDLBP-209ENST00000422933 AKR1D1P51857 326 aa6.62□□□□□ -1.35
HDLBP-209ENST00000422933 LINC00310P59036 64 aa6.62□□□□□ -1.35
HDLBP-209ENST00000422933 TNP2Q05952 138 aa6.62□□□□□ -1.35
HDLBP-209ENST00000422933 FOXI1Q12951 378 aa6.62□□□□□ -1.35
HDLBP-209ENST00000422933 LINC00242Q5T6M2 205 aa6.62□□□□□ -1.35
HDLBP-209ENST00000422933 ZC2HC1BQ5TFG8 222 aa6.62□□□□□ -1.35
HDLBP-209ENST00000422933 LINC00173Q6ZV60 143 aa6.62□□□□□ -1.35
HDLBP-209ENST00000422933 FAM19A3Q7Z5A8 133 aa6.62□□□□□ -1.35
HDLBP-209ENST00000422933 C5orf38Q86SI9 138 aa6.62□□□□□ -1.35
HDLBP-209ENST00000422933 LINC00469Q8N7U9 141 aa6.62□□□□□ -1.35
HDLBP-209ENST00000422933 VPS13DQ5THJ4 4388 aa6.62□□□□□ -1.35
HDLBP-209ENST00000422933 DNAH6Q9C0G6 4158 aa6.61□□□□□ -1.35
HDLBP-209ENST00000422933 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.61□□□□□ -1.35
HDLBP-209ENST00000422933 A0A0J9YXV3 536 aa6.61□□□□□ -1.35
HDLBP-209ENST00000422933 C20orf202A1L168 122 aa6.61□□□□□ -1.35
HDLBP-209ENST00000422933 LECT2O14960 151 aa6.61□□□□□ -1.35
HDLBP-209ENST00000422933 PRSS2P07478 247 aa6.61□□□□□ -1.35
HDLBP-209ENST00000422933 LINC01561Q8N1V8 128 aa6.61□□□□□ -1.35
HDLBP-209ENST00000422933 NTN5Q8WTR8 489 aaPredicted RBP6.61□□□□□ -1.35
HDLBP-209ENST00000422933 FAM104AQ969W3 186 aa6.61□□□□□ -1.35
HDLBP-209ENST00000422933 CHAC1Q9BUX1 264 aa6.61□□□□□ -1.35
HDLBP-209ENST00000422933 PGPEP1Q9NXJ5 209 aa6.61□□□□□ -1.35
HDLBP-209ENST00000422933 A0A087WZ39 114 aa6.6□□□□□ -1.35
HDLBP-209ENST00000422933 IGHV3OR16-9A0A0B4J2B5 98 aa6.6□□□□□ -1.35
HDLBP-209ENST00000422933 F8VRH5 84 aa6.6□□□□□ -1.35
HDLBP-209ENST00000422933 TMEM170BQ5T4T1 132 aa6.6□□□□□ -1.35
HDLBP-209ENST00000422933 KRTAP26-1Q6PEX3 210 aa6.6□□□□□ -1.35
HDLBP-209ENST00000422933 Q8N814 137 aa6.6□□□□□ -1.35
HDLBP-209ENST00000422933 OR10D4PQ8NGN7 298 aa6.6□□□□□ -1.35
HDLBP-209ENST00000422933 PKIGQ9Y2B9 76 aa6.6□□□□□ -1.35
HDLBP-209ENST00000422933 KIAA1109Q2LD37 5005 aa6.6□□□□□ -1.35
HDLBP-209ENST00000422933 DNAH10Q8IVF4 4471 aa6.6□□□□□ -1.35
HDLBP-209ENST00000422933 LRCOL1A6NCL2 159 aa6.59□□□□□ -1.35
HDLBP-209ENST00000422933 F8WDY8 70 aa6.59□□□□□ -1.35
HDLBP-209ENST00000422933 IGLC3P0DOY3 106 aa6.59□□□□□ -1.35
HDLBP-209ENST00000422933 PLNP26678 52 aa6.59□□□□□ -1.35
HDLBP-209ENST00000422933 KRTDAPP60985 99 aa6.59□□□□□ -1.35
HDLBP-209ENST00000422933 SNRPEP62304 92 aaKnown RBP6.59□□□□□ -1.35
HDLBP-209ENST00000422933 CDPF1Q6NVV7 123 aa6.59□□□□□ -1.35
HDLBP-209ENST00000422933 PET117Q6UWS5 81 aa6.59□□□□□ -1.35
HDLBP-209ENST00000422933 MAPKAPK5-AS1Q8N8E1 139 aa6.59□□□□□ -1.35
HDLBP-209ENST00000422933 ORAOV1Q8WV07 137 aa6.59□□□□□ -1.35
HDLBP-209ENST00000422933 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.58□□□□□ -1.36
HDLBP-209ENST00000422933 IGLV5-52A0A0A0MRZ9 124 aa6.58□□□□□ -1.36
HDLBP-209ENST00000422933 SYS1-DBNDD2H3BUS1 97 aa6.58□□□□□ -1.36
HDLBP-209ENST00000422933 DPM2O94777 84 aa6.58□□□□□ -1.36
HDLBP-209ENST00000422933 COX6A2Q02221 97 aa6.58□□□□□ -1.36
HDLBP-209ENST00000422933 C6orf226Q5I0X4 101 aa6.58□□□□□ -1.36
HDLBP-209ENST00000422933 SPATA12Q7Z6I5 190 aa6.58□□□□□ -1.36
HDLBP-209ENST00000422933 MRPL35Q9NZE8 188 aaKnown RBP6.58□□□□□ -1.36
HDLBP-209ENST00000422933 TOMM7Q9P0U1 55 aa6.58□□□□□ -1.36
HDLBP-209ENST00000422933 CDKN2A-AS1Q9UH64 79 aa6.58□□□□□ -1.36
HDLBP-209ENST00000422933 IGHV3-64A0A075B6Q5 118 aa6.57□□□□□ -1.36
HDLBP-209ENST00000422933 GVQW2A0A096LPI5 108 aaPredicted RBP6.57□□□□□ -1.36
HDLBP-209ENST00000422933 IGKCP01834 107 aa6.57□□□□□ -1.36
HDLBP-209ENST00000422933 CKS1BP61024 79 aa6.57□□□□□ -1.36
HDLBP-209ENST00000422933 HERVK_113P61574 105 aa6.57□□□□□ -1.36
HDLBP-209ENST00000422933 SPAG11BQ08648 103 aa6.57□□□□□ -1.36
HDLBP-209ENST00000422933 ODF1Q14990 250 aa6.57□□□□□ -1.36
HDLBP-209ENST00000422933 HIGD2BQ4VC39 106 aa6.57□□□□□ -1.36
HDLBP-209ENST00000422933 HIST3H2BBQ8N257 126 aa6.57□□□□□ -1.36
HDLBP-209ENST00000422933 IGLV5-45A0A087WSX0 123 aa6.56□□□□□ -1.36
HDLBP-209ENST00000422933 C5orf52A6NGY3 159 aa6.56□□□□□ -1.36
HDLBP-209ENST00000422933 C15orf56Q8N910 161 aa6.56□□□□□ -1.36
HDLBP-209ENST00000422933 C2orf48Q96LS8 159 aa6.56□□□□□ -1.36
HDLBP-209ENST00000422933 CAMK2N2Q96S95 79 aa6.56□□□□□ -1.36
HDLBP-209ENST00000422933 TMA7Q9Y2S6 64 aaKnown RBP6.56□□□□□ -1.36
HDLBP-209ENST00000422933 IGLV4-69A0A075B6H9 119 aa6.55□□□□□ -1.36
HDLBP-209ENST00000422933 C11orf86A6NJI1 115 aa6.55□□□□□ -1.36
HDLBP-209ENST00000422933 NDUFA1O15239 70 aa6.55□□□□□ -1.36
HDLBP-209ENST00000422933 SPINK8P0C7L1 97 aa6.55□□□□□ -1.36
HDLBP-209ENST00000422933 C3orf79P0CE67 100 aa6.55□□□□□ -1.36
HDLBP-209ENST00000422933 ZNF22P17026 224 aaPredicted RBP6.55□□□□□ -1.36
HDLBP-209ENST00000422933 CXCL5P42830 114 aa6.55□□□□□ -1.36
HDLBP-209ENST00000422933 SYCNQ0VAF6 134 aa6.55□□□□□ -1.36
HDLBP-209ENST00000422933 Q8IZM0 81 aa6.55□□□□□ -1.36
HDLBP-209ENST00000422933 HIST1H2BLQ99880 126 aa6.55□□□□□ -1.36
HDLBP-209ENST00000422933 WFDC2Q14508 124 aa6.54□□□□□ -1.36
HDLBP-209ENST00000422933 SFTA2Q6UW10 78 aa6.54□□□□□ -1.36
HDLBP-209ENST00000422933 COX7B2Q8TF08 81 aa6.54□□□□□ -1.36
HDLBP-209ENST00000422933 CARD19Q96LW7 228 aa6.54□□□□□ -1.36
HDLBP-209ENST00000422933 HECTD4Q9Y4D8 3996 aa6.54□□□□□ -1.36
HDLBP-209ENST00000422933 C16orf90A8MZG2 172 aa6.53□□□□□ -1.36
HDLBP-209ENST00000422933 SMIM1B2RUZ4 78 aa6.53□□□□□ -1.36
HDLBP-209ENST00000422933 GCSHP23434 173 aa6.53□□□□□ -1.36
HDLBP-209ENST00000422933 CNBPP62633 177 aaKnown RBP6.53□□□□□ -1.36
HDLBP-209ENST00000422933 LINC01545Q5VT33 79 aa6.53□□□□□ -1.36
HDLBP-209ENST00000422933 PMCHL2Q9BQD1 86 aa6.53□□□□□ -1.36
HDLBP-209ENST00000422933 TMEM223A0PJW6 202 aa6.52□□□□□ -1.37
HDLBP-209ENST00000422933 HSBP1L1C9JCN9 74 aa6.52□□□□□ -1.37
HDLBP-209ENST00000422933 PLEKHB2Q96CS7 222 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms