RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 PKHD1P08F94 4074 aa6.4□□□□□ -1.38
HERC3-204ENST00000422770 PRSS1P07477 247 aa6.4□□□□□ -1.38
HERC3-204ENST00000422770 GCSHP23434 173 aa6.4□□□□□ -1.38
HERC3-204ENST00000422770 MRPS36P82909 103 aaKnown RBP6.4□□□□□ -1.38
HERC3-204ENST00000422770 PAPPA-AS1Q5QFB9 102 aa6.4□□□□□ -1.38
HERC3-204ENST00000422770 MAPKAPK5-AS1Q8N8E1 139 aa6.4□□□□□ -1.38
HERC3-204ENST00000422770 NTN5Q8WTR8 489 aaPredicted RBP6.4□□□□□ -1.38
HERC3-204ENST00000422770 PMCHL2Q9BQD1 86 aa6.4□□□□□ -1.38
HERC3-204ENST00000422770 PYGO1Q9Y3Y4 419 aa6.4□□□□□ -1.38
HERC3-204ENST00000422770 DNAH11Q96DT5 4516 aa6.4□□□□□ -1.39
HERC3-204ENST00000422770 TRAV13-1A0A0B4J241 112 aa6.39□□□□□ -1.39
HERC3-204ENST00000422770 A0A1B0GUV1 79 aa6.39□□□□□ -1.39
HERC3-204ENST00000422770 C20orf202A1L168 122 aa6.39□□□□□ -1.39
HERC3-204ENST00000422770 USP17L23D6RBM5 183 aa6.39□□□□□ -1.39
HERC3-204ENST00000422770 SYS1-DBNDD2H3BUS1 97 aa6.39□□□□□ -1.39
HERC3-204ENST00000422770 ZNF664Q8N3J9 261 aa6.39□□□□□ -1.39
HERC3-204ENST00000422770 PKD1P98161 4303 aa6.38□□□□□ -1.39
HERC3-204ENST00000422770 NPSP0C0P6 89 aa6.38□□□□□ -1.39
HERC3-204ENST00000422770 KRTAP10-1P60331 282 aa6.38□□□□□ -1.39
HERC3-204ENST00000422770 PMVKQ15126 192 aa6.38□□□□□ -1.39
HERC3-204ENST00000422770 C14orf177Q52M58 125 aa6.38□□□□□ -1.39
HERC3-204ENST00000422770 CHAC1Q9BUX1 264 aa6.38□□□□□ -1.39
HERC3-204ENST00000422770 VCX2Q9H322 139 aa6.38□□□□□ -1.39
HERC3-204ENST00000422770 CDC42SE2Q9NRR3 84 aa6.38□□□□□ -1.39
HERC3-204ENST00000422770 PRR34Q9NV39 138 aa6.38□□□□□ -1.39
HERC3-204ENST00000422770 CHTOPQ9Y3Y2 248 aaKnown RBP6.38□□□□□ -1.39
HERC3-204ENST00000422770 TRAV8-4A0A0B4J246 113 aa6.37□□□□□ -1.39
HERC3-204ENST00000422770 CDK2AP2O75956 126 aa6.37□□□□□ -1.39
HERC3-204ENST00000422770 HAMPP81172 84 aa6.37□□□□□ -1.39
HERC3-204ENST00000422770 ODF1Q14990 250 aa6.37□□□□□ -1.39
HERC3-204ENST00000422770 LINC01620Q4KN68 170 aa6.37□□□□□ -1.39
HERC3-204ENST00000422770 PET117Q6UWS5 81 aa6.37□□□□□ -1.39
HERC3-204ENST00000422770 FAM104AQ969W3 186 aa6.37□□□□□ -1.39
HERC3-204ENST00000422770 AMELXQ99217 191 aa6.37□□□□□ -1.39
HERC3-204ENST00000422770 MRPL35Q9NZE8 188 aaKnown RBP6.37□□□□□ -1.39
HERC3-204ENST00000422770 CSDC2Q9Y534 153 aaKnown RBP6.37□□□□□ -1.39
HERC3-204ENST00000422770 RYR1P21817 5038 aa6.36□□□□□ -1.39
HERC3-204ENST00000422770 TRAV12-1A0A0B4J245 112 aa6.36□□□□□ -1.39
HERC3-204ENST00000422770 GAGE12HA6NDE8 117 aa6.36□□□□□ -1.39
HERC3-204ENST00000422770 SCGB1D1O95968 90 aa6.36□□□□□ -1.39
HERC3-204ENST00000422770 UBE2D1P51668 147 aa6.36□□□□□ -1.39
HERC3-204ENST00000422770 ATOH7Q8N100 152 aa6.36□□□□□ -1.39
HERC3-204ENST00000422770 CST9LQ9H4G1 147 aa6.36□□□□□ -1.39
HERC3-204ENST00000422770 DYNC1H1Q14204 4646 aaKnown RBP6.36□□□□□ -1.39
HERC3-204ENST00000422770 IGLV4-69A0A075B6H9 119 aa6.35□□□□□ -1.39
HERC3-204ENST00000422770 A0A0J9YXV3 536 aa6.35□□□□□ -1.39
HERC3-204ENST00000422770 LOC105371267A0A1B0GV96 52 aa6.35□□□□□ -1.39
HERC3-204ENST00000422770 hDV102S1A0JD36 115 aa6.35□□□□□ -1.39
HERC3-204ENST00000422770 C11orf86A6NJI1 115 aa6.35□□□□□ -1.39
HERC3-204ENST00000422770 F8VRH5 84 aa6.35□□□□□ -1.39
HERC3-204ENST00000422770 DPM2O94777 84 aa6.35□□□□□ -1.39
HERC3-204ENST00000422770 XCL1P47992 114 aa6.35□□□□□ -1.39
HERC3-204ENST00000422770 LINC01545Q5VT33 79 aa6.35□□□□□ -1.39
HERC3-204ENST00000422770 LINC00469Q8N7U9 141 aa6.35□□□□□ -1.39
HERC3-204ENST00000422770 CHCHD10Q8WYQ3 142 aaPredicted RBP6.35□□□□□ -1.39
HERC3-204ENST00000422770 GEMIN7Q9H840 131 aaKnown RBP6.35□□□□□ -1.39
HERC3-204ENST00000422770 LINC00959A0A1B0GUT2 108 aa6.34□□□□□ -1.39
HERC3-204ENST00000422770 CCL25O15444 150 aa6.34□□□□□ -1.39
HERC3-204ENST00000422770 IGLC3P0DOY3 106 aa6.34□□□□□ -1.39
HERC3-204ENST00000422770 PLNP26678 52 aa6.34□□□□□ -1.39
HERC3-204ENST00000422770 SS18Q15532 418 aa6.34□□□□□ -1.39
HERC3-204ENST00000422770 IGKCP01834 107 aa6.33□□□□□ -1.4
HERC3-204ENST00000422770 ZNF22P17026 224 aaPredicted RBP6.32□□□□□ -1.4
HERC3-204ENST00000422770 HIGD2BQ4VC39 106 aa6.32□□□□□ -1.4
HERC3-204ENST00000422770 PYY3Q5JQD4 70 aa6.32□□□□□ -1.4
HERC3-204ENST00000422770 TMEM170BQ5T4T1 132 aa6.32□□□□□ -1.4
HERC3-204ENST00000422770 LINC00242Q5T6M2 205 aa6.32□□□□□ -1.4
HERC3-204ENST00000422770 CFAP161Q6P656 301 aa6.32□□□□□ -1.4
HERC3-204ENST00000422770 KRTAP26-1Q6PEX3 210 aa6.32□□□□□ -1.4
HERC3-204ENST00000422770 IGHV3-64A0A075B6Q5 118 aa6.31□□□□□ -1.4
HERC3-204ENST00000422770 TINCRA0A1B0GVN0 87 aa6.31□□□□□ -1.4
HERC3-204ENST00000422770 HERVK_113P63121 156 aa6.31□□□□□ -1.4
HERC3-204ENST00000422770 SEC11AP67812 179 aa6.31□□□□□ -1.4
HERC3-204ENST00000422770 JOSD1Q15040 202 aaPredicted RBP6.31□□□□□ -1.4
HERC3-204ENST00000422770 ABCA13Q86UQ4 5058 aa6.3□□□□□ -1.4
HERC3-204ENST00000422770 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.3□□□□□ -1.4
HERC3-204ENST00000422770 H3BRM9 83 aa6.3□□□□□ -1.4
HERC3-204ENST00000422770 COX7A2LO14548 114 aa6.3□□□□□ -1.4
HERC3-204ENST00000422770 SMR3BP02814 79 aaPredicted RBP6.3□□□□□ -1.4
HERC3-204ENST00000422770 SPINK8P0C7L1 97 aa6.3□□□□□ -1.4
HERC3-204ENST00000422770 SMIM6P0DI80 62 aa6.3□□□□□ -1.4
HERC3-204ENST00000422770 MALP21145 153 aa6.3□□□□□ -1.4
HERC3-204ENST00000422770 HERVK_113P61574 105 aa6.3□□□□□ -1.4
HERC3-204ENST00000422770 COX6A2Q02221 97 aa6.3□□□□□ -1.4
HERC3-204ENST00000422770 C5orf38Q86SI9 138 aa6.3□□□□□ -1.4
HERC3-204ENST00000422770 FAM30AQ9NZY2 134 aa6.3□□□□□ -1.4
HERC3-204ENST00000422770 CDKN2A-AS1Q9UH64 79 aa6.3□□□□□ -1.4
HERC3-204ENST00000422770 HSBP1L1C9JCN9 74 aa6.29□□□□□ -1.4
HERC3-204ENST00000422770 XGP55808 180 aa6.29□□□□□ -1.4
HERC3-204ENST00000422770 FOXI1Q12951 378 aa6.29□□□□□ -1.4
HERC3-204ENST00000422770 CD164L2Q6UWJ8 174 aa6.29□□□□□ -1.4
HERC3-204ENST00000422770 Q8N1X5 172 aa6.29□□□□□ -1.4
HERC3-204ENST00000422770 C15orf56Q8N910 161 aa6.29□□□□□ -1.4
HERC3-204ENST00000422770 VAMP8Q9BV40 100 aa6.29□□□□□ -1.4
HERC3-204ENST00000422770 IGLV5-45A0A087WSX0 123 aa6.28□□□□□ -1.4
HERC3-204ENST00000422770 EPM2AB3EWF7 344 aa6.28□□□□□ -1.4
HERC3-204ENST00000422770 MAJINQ3KP22 176 aa6.28□□□□□ -1.4
HERC3-204ENST00000422770 FAM19A3Q7Z5A8 133 aa6.28□□□□□ -1.4
HERC3-204ENST00000422770 DPH3Q96FX2 82 aa6.28□□□□□ -1.4
HERC3-204ENST00000422770 PAM16Q9Y3D7 125 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms