RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 Q8N3U1 123 aa6.17□□□□□ -1.42
HPS4-204ENST00000422379 ATP6V0E2Q8NHE4 81 aa6.17□□□□□ -1.42
HPS4-204ENST00000422379 PLEKHB2Q96CS7 222 aa6.17□□□□□ -1.42
HPS4-204ENST00000422379 TIMM21Q9BVV7 248 aa6.17□□□□□ -1.42
HPS4-204ENST00000422379 GTSF1LQ9H1H1 148 aa6.17□□□□□ -1.42
HPS4-204ENST00000422379 DNAH10Q8IVF4 4471 aa6.16□□□□□ -1.42
HPS4-204ENST00000422379 H3BNG1 76 aa6.16□□□□□ -1.42
HPS4-204ENST00000422379 PCP4P48539 62 aa6.16□□□□□ -1.42
HPS4-204ENST00000422379 AMMECR1LQ6DCA0 310 aa6.16□□□□□ -1.42
HPS4-204ENST00000422379 GTF2H5Q6ZYL4 71 aa6.16□□□□□ -1.42
HPS4-204ENST00000422379 CEND1Q8N111 149 aa6.16□□□□□ -1.42
HPS4-204ENST00000422379 IGHV3-64A0A075B6Q5 118 aa6.15□□□□□ -1.42
HPS4-204ENST00000422379 TRBV6-8A0A0A6YYG3 113 aa6.15□□□□□ -1.42
HPS4-204ENST00000422379 GAGE10A6NGK3 116 aa6.15□□□□□ -1.42
HPS4-204ENST00000422379 J3QQQ9 107 aa6.15□□□□□ -1.42
HPS4-204ENST00000422379 UBE2L6O14933 153 aa6.15□□□□□ -1.42
HPS4-204ENST00000422379 TAL2Q16559 108 aa6.15□□□□□ -1.42
HPS4-204ENST00000422379 DGAT2L7PQ6IED9 249 aa6.15□□□□□ -1.42
HPS4-204ENST00000422379 TM2D2Q9BX73 214 aa6.15□□□□□ -1.42
HPS4-204ENST00000422379 ICOSQ9Y6W8 199 aa6.15□□□□□ -1.42
HPS4-204ENST00000422379 TINCRA0A1B0GVN0 87 aa6.15□□□□□ -1.43
HPS4-204ENST00000422379 IGLL5B9A064 214 aa6.15□□□□□ -1.43
HPS4-204ENST00000422379 H3BRM9 83 aa6.15□□□□□ -1.43
HPS4-204ENST00000422379 LEPROTO15243 131 aa6.15□□□□□ -1.43
HPS4-204ENST00000422379 UBE2D1P51668 147 aa6.15□□□□□ -1.43
HPS4-204ENST00000422379 MRPL23Q16540 153 aaKnown RBP6.15□□□□□ -1.43
HPS4-204ENST00000422379 ESRGQ1W209 222 aa6.15□□□□□ -1.43
HPS4-204ENST00000422379 RNF151Q2KHN1 245 aa6.15□□□□□ -1.43
HPS4-204ENST00000422379 LYPD5Q6UWN5 251 aa6.15□□□□□ -1.43
HPS4-204ENST00000422379 SCGB1D4Q6XE38 83 aa6.15□□□□□ -1.43
HPS4-204ENST00000422379 HIST1H4GQ99525 98 aa6.15□□□□□ -1.43
HPS4-204ENST00000422379 TMEM243Q9BU79 118 aa6.15□□□□□ -1.43
HPS4-204ENST00000422379 DNAH2Q9P225 4427 aa6.14□□□□□ -1.43
HPS4-204ENST00000422379 H7C423 109 aa6.14□□□□□ -1.43
HPS4-204ENST00000422379 LGALS3P17931 250 aaKnown RBP6.14□□□□□ -1.43
HPS4-204ENST00000422379 CSDC2Q9Y534 153 aaKnown RBP6.14□□□□□ -1.43
HPS4-204ENST00000422379 KMT2AQ03164 3969 aa6.14□□□□□ -1.43
HPS4-204ENST00000422379 SH2D6Q7Z4S9 175 aa6.13□□□□□ -1.43
HPS4-204ENST00000422379 TRAV8-3A0A0A6YYJ7 113 aa6.13□□□□□ -1.43
HPS4-204ENST00000422379 C9orf118A6NHY6 69 aa6.13□□□□□ -1.43
HPS4-204ENST00000422379 K7ERJ3 54 aa6.13□□□□□ -1.43
HPS4-204ENST00000422379 IGHV3-30-3P0DP02 117 aa6.13□□□□□ -1.43
HPS4-204ENST00000422379 RAB37Q96AX2 223 aa6.13□□□□□ -1.43
HPS4-204ENST00000422379 TMEM101Q96IK0 257 aa6.13□□□□□ -1.43
HPS4-204ENST00000422379 VPS25Q9BRG1 176 aa6.13□□□□□ -1.43
HPS4-204ENST00000422379 CDC42SE2Q9NRR3 84 aa6.13□□□□□ -1.43
HPS4-204ENST00000422379 NHP2Q9NX24 153 aaKnown RBP6.13□□□□□ -1.43
HPS4-204ENST00000422379 K7ERU9 68 aa6.12□□□□□ -1.43
HPS4-204ENST00000422379 RBX1P62877 108 aa6.12□□□□□ -1.43
HPS4-204ENST00000422379 GAGE6Q13070 117 aa6.12□□□□□ -1.43
HPS4-204ENST00000422379 ZFAND6Q6FIF0 208 aa6.12□□□□□ -1.43
HPS4-204ENST00000422379 OR5A1Q8NGJ0 315 aa6.12□□□□□ -1.43
HPS4-204ENST00000422379 NAA38Q9BRA0 125 aaKnown RBP6.12□□□□□ -1.43
HPS4-204ENST00000422379 GEMIN7Q9H840 131 aaKnown RBP6.12□□□□□ -1.43
HPS4-204ENST00000422379 APLNQ9ULZ1 77 aa6.12□□□□□ -1.43
HPS4-204ENST00000422379 IGLV4-60A0A075B6I1 120 aa6.11□□□□□ -1.43
HPS4-204ENST00000422379 IGLV5-45A0A087WSX0 123 aa6.11□□□□□ -1.43
HPS4-204ENST00000422379 IGHV1-58A0A0C4DH39 117 aa6.11□□□□□ -1.43
HPS4-204ENST00000422379 SPINK8P0C7L1 97 aa6.11□□□□□ -1.43
HPS4-204ENST00000422379 SMIM13P0DJ93 91 aa6.11□□□□□ -1.43
HPS4-204ENST00000422379 TIRAPP58753 221 aa6.11□□□□□ -1.43
HPS4-204ENST00000422379 OCIAD2Q56VL3 154 aa6.11□□□□□ -1.43
HPS4-204ENST00000422379 LINC00242Q5T6M2 205 aa6.11□□□□□ -1.43
HPS4-204ENST00000422379 WFDC10BQ8IUB3 73 aa6.11□□□□□ -1.43
HPS4-204ENST00000422379 CHCHD5Q9BSY4 110 aa6.11□□□□□ -1.43
HPS4-204ENST00000422379 CDKN2A-AS1Q9UH64 79 aa6.11□□□□□ -1.43
HPS4-204ENST00000422379 SACSQ9NZJ4 4579 aa6.11□□□□□ -1.43
HPS4-204ENST00000422379 H3BUT2 72 aa6.11□□□□□ -1.43
HPS4-204ENST00000422379 COX6A2Q02221 97 aa6.11□□□□□ -1.43
HPS4-204ENST00000422379 LELP1Q5T871 98 aa6.11□□□□□ -1.43
HPS4-204ENST00000422379 FAM19A3Q7Z5A8 133 aa6.11□□□□□ -1.43
HPS4-204ENST00000422379 LINC00588Q9Y4M8 146 aa6.11□□□□□ -1.43
HPS4-204ENST00000422379 ALMS1Q8TCU4 4167 aa6.1□□□□□ -1.43
HPS4-204ENST00000422379 TRAV13-1A0A0B4J241 112 aa6.1□□□□□ -1.43
HPS4-204ENST00000422379 HERVK_113P63121 156 aa6.1□□□□□ -1.43
HPS4-204ENST00000422379 SRSF9Q13242 221 aaKnown RBP eCLIP6.1□□□□□ -1.43
HPS4-204ENST00000422379 C10orf126Q8N4M7 172 aa6.1□□□□□ -1.43
HPS4-204ENST00000422379 SPANXB1Q9NS25 103 aaPredicted RBP6.1□□□□□ -1.43
HPS4-204ENST00000422379 C15orf53Q8NAA6 179 aa6.09□□□□□ -1.43
HPS4-204ENST00000422379 WWC2-AS2Q96NR7 200 aa6.09□□□□□ -1.43
HPS4-204ENST00000422379 HYDINQ4G0P3 5121 aa6.09□□□□□ -1.43
HPS4-204ENST00000422379 A0A1B0GWB2 263 aa6.09□□□□□ -1.44
HPS4-204ENST00000422379 FABP2P12104 132 aa6.09□□□□□ -1.44
HPS4-204ENST00000422379 MUC7Q8TAX7 377 aa6.09□□□□□ -1.44
HPS4-204ENST00000422379 A0A0J9YXY3 114 aa6.08□□□□□ -1.44
HPS4-204ENST00000422379 NUPR2A6NF83 97 aa6.08□□□□□ -1.44
HPS4-204ENST00000422379 K7EP34 96 aa6.08□□□□□ -1.44
HPS4-204ENST00000422379 IGHV3-30P01768 117 aa6.08□□□□□ -1.44
HPS4-204ENST00000422379 IGHV3-30-5P0DP03 117 aa6.08□□□□□ -1.44
HPS4-204ENST00000422379 NDUFA12Q9UI09 145 aa6.08□□□□□ -1.44
HPS4-204ENST00000422379 IGLV5-39A0A0G2JS06 123 aa6.07□□□□□ -1.44
HPS4-204ENST00000422379 A0A1W2PPM0 123 aa6.07□□□□□ -1.44
HPS4-204ENST00000422379 SPCS1Q9Y6A9 102 aa6.07□□□□□ -1.44
HPS4-204ENST00000422379 KMT2CQ8NEZ4 4911 aaKnown RBP6.07□□□□□ -1.44
HPS4-204ENST00000422379 SMIM1B2RUZ4 78 aa6.07□□□□□ -1.44
HPS4-204ENST00000422379 TMEM262E9PQX1 116 aa6.07□□□□□ -1.44
HPS4-204ENST00000422379 CDIP1Q9H305 208 aa6.07□□□□□ -1.44
HPS4-204ENST00000422379 DNAH6Q9C0G6 4158 aa6.07□□□□□ -1.44
HPS4-204ENST00000422379 IGKV3OR2-268A0A0C4DH90 116 aa6.06□□□□□ -1.44
HPS4-204ENST00000422379 TMEM238C9JI98 176 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms