RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 A0A096LNJ9 63 aa9.01□□□□□ -0.97
CLCN4-203ENST00000421085 RPL28P46779 137 aaKnown RBP9.01□□□□□ -0.97
CLCN4-203ENST00000421085 Q8IZM0 81 aa9.01□□□□□ -0.97
CLCN4-203ENST00000421085 C19orf84I3L1E1 186 aa9□□□□□ -0.97
CLCN4-203ENST00000421085 IGLV2-33A0A075B6J2 118 aaPredicted RBP9□□□□□ -0.97
CLCN4-203ENST00000421085 SPINK6Q6UWN8 80 aa9□□□□□ -0.97
CLCN4-203ENST00000421085 NANOS2P60321 138 aaKnown RBP9□□□□□ -0.97
CLCN4-203ENST00000421085 CSDC2Q9Y534 153 aaKnown RBP9□□□□□ -0.97
CLCN4-203ENST00000421085 ARHGAP32A7KAX9 2087 aa9□□□□□ -0.97
CLCN4-203ENST00000421085 IGHV4-30-4P0DP06 118 aa9□□□□□ -0.97
CLCN4-203ENST00000421085 IGHV4-31P0DP07 118 aa9□□□□□ -0.97
CLCN4-203ENST00000421085 COX6A2Q02221 97 aa8.99□□□□□ -0.97
CLCN4-203ENST00000421085 SMIM1B2RUZ4 78 aa8.99□□□□□ -0.97
CLCN4-203ENST00000421085 PRYO14603 147 aa8.99□□□□□ -0.97
CLCN4-203ENST00000421085 PSMG3-AS1Q96PY0 264 aa8.98□□□□□ -0.97
CLCN4-203ENST00000421085 ZNF580Q9UK33 172 aa8.98□□□□□ -0.97
CLCN4-203ENST00000421085 ATG2AQ2TAZ0 1938 aa8.98□□□□□ -0.97
CLCN4-203ENST00000421085 WFDC10AQ9H1F0 79 aa8.97□□□□□ -0.97
CLCN4-203ENST00000421085 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.97□□□□□ -0.97
CLCN4-203ENST00000421085 CDIP1Q9H305 208 aa8.97□□□□□ -0.97
CLCN4-203ENST00000421085 PTPRQQ9UMZ3 2332 aa8.97□□□□□ -0.97
CLCN4-203ENST00000421085 C18orf65Q6ZTR6 163 aa8.97□□□□□ -0.97
CLCN4-203ENST00000421085 CYSRT1A8MQ03 144 aa8.97□□□□□ -0.97
CLCN4-203ENST00000421085 Q8N3U1 123 aa8.97□□□□□ -0.97
CLCN4-203ENST00000421085 LINC00208Q96KT6 92 aa8.97□□□□□ -0.97
CLCN4-203ENST00000421085 PSPHP1O15172 72 aa8.96□□□□□ -0.97
CLCN4-203ENST00000421085 PRR3P79522 188 aaKnown RBP8.96□□□□□ -0.97
CLCN4-203ENST00000421085 ZNF843Q8N446 348 aa8.96□□□□□ -0.97
CLCN4-203ENST00000421085 C11orf71Q6IPW1 123 aa8.96□□□□□ -0.97
CLCN4-203ENST00000421085 LELP1Q5T871 98 aa8.96□□□□□ -0.98
CLCN4-203ENST00000421085 CHCHD7Q9BUK0 85 aa8.96□□□□□ -0.98
CLCN4-203ENST00000421085 EML5Q05BV3 1969 aa8.95□□□□□ -0.98
CLCN4-203ENST00000421085 C9orf116Q5BN46 136 aaPredicted RBP8.95□□□□□ -0.98
CLCN4-203ENST00000421085 ZNF702PQ9H963 129 aa8.95□□□□□ -0.98
CLCN4-203ENST00000421085 IGLV1-40P01703 118 aa8.94□□□□□ -0.98
CLCN4-203ENST00000421085 IGLV2-18A0A075B6J9 118 aa8.94□□□□□ -0.98
CLCN4-203ENST00000421085 EDN2P20800 178 aa8.94□□□□□ -0.98
CLCN4-203ENST00000421085 UNQ6190/PRO20217Q6UXQ8 127 aa8.94□□□□□ -0.98
CLCN4-203ENST00000421085 IGLV9-49A0A0B4J1Y8 123 aa8.93□□□□□ -0.98
CLCN4-203ENST00000421085 HILS1P60008 231 aa8.93□□□□□ -0.98
CLCN4-203ENST00000421085 MUC7Q8TAX7 377 aa8.93□□□□□ -0.98
CLCN4-203ENST00000421085 TRBV10-3A0A0K0K1G6 114 aa8.93□□□□□ -0.98
CLCN4-203ENST00000421085 FAM208BQ5VWN6 2430 aa8.93□□□□□ -0.98
CLCN4-203ENST00000421085 KPRPQ5T749 579 aaPredicted RBP8.92□□□□□ -0.98
CLCN4-203ENST00000421085 AMELXQ99217 191 aa8.92□□□□□ -0.98
CLCN4-203ENST00000421085 TRBV7-7A0A0K0K1E9 115 aa8.92□□□□□ -0.98
CLCN4-203ENST00000421085 LINC00846Q9NV44 126 aa8.92□□□□□ -0.98
CLCN4-203ENST00000421085 MRGPRG-AS1Q2M3A8 158 aa8.92□□□□□ -0.98
CLCN4-203ENST00000421085 C1orf137Q5JT78 98 aa8.92□□□□□ -0.98
CLCN4-203ENST00000421085 RETNQ9HD89 108 aa8.92□□□□□ -0.98
CLCN4-203ENST00000421085 SORL1Q92673 2214 aa8.91□□□□□ -0.98
CLCN4-203ENST00000421085 ANKHD1Q8IWZ3 2542 aaKnown RBP8.9□□□□□ -0.99
CLCN4-203ENST00000421085 IGLV4-60A0A075B6I1 120 aa8.89□□□□□ -0.99
CLCN4-203ENST00000421085 ZNF706Q9Y5V0 76 aaPredicted RBP8.89□□□□□ -0.99
CLCN4-203ENST00000421085 ZFHX2Q9C0A1 2572 aaPredicted RBP8.89□□□□□ -0.99
CLCN4-203ENST00000421085 COX8CQ7Z4L0 72 aa8.89□□□□□ -0.99
CLCN4-203ENST00000421085 TRBV7-6A0A0J9YX20 115 aa8.89□□□□□ -0.99
CLCN4-203ENST00000421085 LINC01547P58512 204 aaPredicted RBP8.89□□□□□ -0.99
CLCN4-203ENST00000421085 ESRGQ1W209 222 aa8.89□□□□□ -0.99
CLCN4-203ENST00000421085 LINC00575Q6W349 94 aa8.89□□□□□ -0.99
CLCN4-203ENST00000421085 TMEM254Q8TBM7 123 aa8.89□□□□□ -0.99
CLCN4-203ENST00000421085 PLAC8L1A1L4L8 177 aa8.88□□□□□ -0.99
CLCN4-203ENST00000421085 C10orf25Q5T742 122 aa8.88□□□□□ -0.99
CLCN4-203ENST00000421085 SHISA2Q6UWI4 295 aa8.88□□□□□ -0.99
CLCN4-203ENST00000421085 BEAN1Q3B7T3 259 aa8.88□□□□□ -0.99
CLCN4-203ENST00000421085 SPG11Q96JI7 2443 aa8.87□□□□□ -0.99
CLCN4-203ENST00000421085 Q6ZVQ6 151 aa8.87□□□□□ -0.99
CLCN4-203ENST00000421085 TRAV10A0A0B4J240 114 aa8.86□□□□□ -0.99
CLCN4-203ENST00000421085 PCOTHQ58A44 107 aa8.86□□□□□ -0.99
CLCN4-203ENST00000421085 PRORYQ9H606 182 aa8.86□□□□□ -0.99
CLCN4-203ENST00000421085 EGFEM1PQ0D2K5 195 aa8.85□□□□□ -0.99
CLCN4-203ENST00000421085 IL17DQ8TAD2 202 aa8.85□□□□□ -0.99
CLCN4-203ENST00000421085 PRO0628Q9UI54 55 aa8.85□□□□□ -0.99
CLCN4-203ENST00000421085 DSCAMO60469 2012 aa8.85□□□□□ -0.99
CLCN4-203ENST00000421085 Q6ZSN1 163 aa8.84□□□□□ -0.99
CLCN4-203ENST00000421085 C7orf33Q8WU49 177 aa8.84□□□□□ -0.99
CLCN4-203ENST00000421085 LINC01006Q8NI28 216 aa8.84□□□□□ -0.99
CLCN4-203ENST00000421085 SMCPP49901 116 aaPredicted RBP8.84□□□□□ -0.99
CLCN4-203ENST00000421085 LTBP2Q14767 1821 aa8.84□□□□□ -1
CLCN4-203ENST00000421085 ATRXP46100 2492 aa8.84□□□□□ -1
CLCN4-203ENST00000421085 ODF3L2Q3SX64 289 aa8.83□□□□□ -1
CLCN4-203ENST00000421085 INAFM1C9JVW0 142 aa8.83□□□□□ -1
CLCN4-203ENST00000421085 A8MTW9 85 aa8.83□□□□□ -1
CLCN4-203ENST00000421085 H0Y9P7 68 aa8.82□□□□□ -1
CLCN4-203ENST00000421085 NAV3Q8IVL0 2385 aa8.82□□□□□ -1
CLCN4-203ENST00000421085 HIVEP2P31629 2446 aa8.82□□□□□ -1
CLCN4-203ENST00000421085 REG3GQ6UW15 175 aa8.82□□□□□ -1
CLCN4-203ENST00000421085 C6orf223Q8N319 242 aa8.82□□□□□ -1
CLCN4-203ENST00000421085 CSPG4Q6UVK1 2322 aa8.82□□□□□ -1
CLCN4-203ENST00000421085 DEFB116Q30KQ4 102 aa8.82□□□□□ -1
CLCN4-203ENST00000421085 LINC00337Q8N6G1 96 aa8.82□□□□□ -1
CLCN4-203ENST00000421085 C2CD3Q4AC94 2353 aa8.81□□□□□ -1
CLCN4-203ENST00000421085 C4orf26Q17RF5 130 aa8.81□□□□□ -1
CLCN4-203ENST00000421085 IGHV6-1A0A0B4J1U7 121 aa8.81□□□□□ -1
CLCN4-203ENST00000421085 CRYGAP11844 174 aa8.8□□□□□ -1
CLCN4-203ENST00000421085 FHL2Q14192 279 aa8.8□□□□□ -1
CLCN4-203ENST00000421085 M0R2N4 97 aa8.8□□□□□ -1
CLCN4-203ENST00000421085 COL4A4P53420 1690 aaPredicted RBP8.8□□□□□ -1
CLCN4-203ENST00000421085 TECTAO75443 2155 aa8.79□□□□□ -1
CLCN4-203ENST00000421085 CXCL6P80162 114 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms