RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 UBE2D1P51668 147 aa13.29□□□□□ -0.28
EGFR-204ENST00000420316 COX6A2Q02221 97 aa13.29□□□□□ -0.28
EGFR-204ENST00000420316 C14orf177Q52M58 125 aa13.29□□□□□ -0.28
EGFR-204ENST00000420316 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.28□□□□□ -0.28
EGFR-204ENST00000420316 PRSS1P07477 247 aa13.28□□□□□ -0.28
EGFR-204ENST00000420316 HIGD2BQ4VC39 106 aa13.28□□□□□ -0.28
EGFR-204ENST00000420316 LINC00242Q5T6M2 205 aa13.28□□□□□ -0.28
EGFR-204ENST00000420316 C15orf56Q8N910 161 aa13.28□□□□□ -0.28
EGFR-204ENST00000420316 C2orf88Q9BSF0 95 aa13.28□□□□□ -0.28
EGFR-204ENST00000420316 NDUFA6P56556 154 aa13.28□□□□□ -0.28
EGFR-204ENST00000420316 LINC01549A6NIU2 74 aa13.27□□□□□ -0.29
EGFR-204ENST00000420316 NPSP0C0P6 89 aa13.27□□□□□ -0.29
EGFR-204ENST00000420316 LINC00526Q96FQ7 95 aa13.26□□□□□ -0.29
EGFR-204ENST00000420316 LRP1BQ9NZR2 4599 aa13.26□□□□□ -0.29
EGFR-204ENST00000420316 A0A0J9YXV3 536 aa13.25□□□□□ -0.29
EGFR-204ENST00000420316 LINC01620Q4KN68 170 aa13.25□□□□□ -0.29
EGFR-204ENST00000420316 PAPPA-AS1Q5QFB9 102 aa13.25□□□□□ -0.29
EGFR-204ENST00000420316 IGLV5-52A0A0A0MRZ9 124 aa13.24□□□□□ -0.29
EGFR-204ENST00000420316 hDV102S1A0JD36 115 aa13.24□□□□□ -0.29
EGFR-204ENST00000420316 COX7A2LO14548 114 aa13.24□□□□□ -0.29
EGFR-204ENST00000420316 CST9LQ9H4G1 147 aa13.24□□□□□ -0.29
EGFR-204ENST00000420316 PMVKQ15126 192 aa13.24□□□□□ -0.29
EGFR-204ENST00000420316 CFAP161Q6P656 301 aa13.24□□□□□ -0.29
EGFR-204ENST00000420316 IGHV3OR16-9A0A0B4J2B5 98 aa13.23□□□□□ -0.29
EGFR-204ENST00000420316 FABP4P15090 132 aa13.23□□□□□ -0.29
EGFR-204ENST00000420316 MALP21145 153 aa13.23□□□□□ -0.29
EGFR-204ENST00000420316 ATP5LO75964 103 aa13.22□□□□□ -0.29
EGFR-204ENST00000420316 IFI27L1Q96BM0 104 aa13.21□□□□□ -0.29
EGFR-204ENST00000420316 IGHV1-58A0A0C4DH39 117 aa13.2□□□□□ -0.3
EGFR-204ENST00000420316 SLPIP03973 132 aa13.2□□□□□ -0.3
EGFR-204ENST00000420316 GCSHP23434 173 aa13.2□□□□□ -0.3
EGFR-204ENST00000420316 H0Y8G0 127 aa13.19□□□□□ -0.3
EGFR-204ENST00000420316 LEPROTL1O95214 131 aa13.19□□□□□ -0.3
EGFR-204ENST00000420316 KRTAP10-1P60331 282 aa13.18□□□□□ -0.3
EGFR-204ENST00000420316 FAM19A3Q7Z5A8 133 aa13.18□□□□□ -0.3
EGFR-204ENST00000420316 GEMIN7Q9H840 131 aaKnown RBP13.18□□□□□ -0.3
EGFR-204ENST00000420316 CDKN2A-AS1Q9UH64 79 aa13.18□□□□□ -0.3
EGFR-204ENST00000420316 GVQW2A0A096LPI5 108 aaPredicted RBP13.17□□□□□ -0.3
EGFR-204ENST00000420316 A0A087WZ39 114 aa13.16□□□□□ -0.3
EGFR-204ENST00000420316 ORAOV1Q8WV07 137 aa13.16□□□□□ -0.3
EGFR-204ENST00000420316 TINCRA0A1B0GVN0 87 aa13.15□□□□□ -0.3
EGFR-204ENST00000420316 HERVK_113P63121 156 aa13.15□□□□□ -0.3
EGFR-204ENST00000420316 LINC00469Q8N7U9 141 aa13.15□□□□□ -0.3
EGFR-204ENST00000420316 IGLV4-69A0A075B6H9 119 aa13.15□□□□□ -0.3
EGFR-204ENST00000420316 KIAA1109Q2LD37 5005 aa13.14□□□□□ -0.31
EGFR-204ENST00000420316 IGHV3-64A0A075B6Q5 118 aa13.14□□□□□ -0.31
EGFR-204ENST00000420316 ZNF561-AS1K7EIQ3 104 aa13.14□□□□□ -0.31
EGFR-204ENST00000420316 APOMO95445 188 aa13.14□□□□□ -0.31
EGFR-204ENST00000420316 CNBPP62633 177 aaKnown RBP13.14□□□□□ -0.31
EGFR-204ENST00000420316 SPAG11BQ08648 103 aa13.14□□□□□ -0.31
EGFR-204ENST00000420316 CHAC1Q9BUX1 264 aa13.14□□□□□ -0.31
EGFR-204ENST00000420316 CHTOPQ9Y3Y2 248 aaKnown RBP13.14□□□□□ -0.31
EGFR-204ENST00000420316 SEC11AP67812 179 aa13.13□□□□□ -0.31
EGFR-204ENST00000420316 COA6Q5JTJ3 125 aaKnown RBP13.13□□□□□ -0.31
EGFR-204ENST00000420316 IGLC3P0DOY3 106 aa13.12□□□□□ -0.31
EGFR-204ENST00000420316 C11orf86A6NJI1 115 aa13.11□□□□□ -0.31
EGFR-204ENST00000420316 HSPB8Q9UJY1 196 aa13.11□□□□□ -0.31
EGFR-204ENST00000420316 APOBP04114 4563 aaKnown RBP13.11□□□□□ -0.31
EGFR-204ENST00000420316 CDK2AP2O75956 126 aa13.11□□□□□ -0.31
EGFR-204ENST00000420316 SPINK8P0C7L1 97 aa13.11□□□□□ -0.31
EGFR-204ENST00000420316 C9orf163Q8N9P6 203 aa13.11□□□□□ -0.31
EGFR-204ENST00000420316 MRPL35Q9NZE8 188 aaKnown RBP13.11□□□□□ -0.31
EGFR-204ENST00000420316 TOMM7Q9P0U1 55 aa13.11□□□□□ -0.31
EGFR-204ENST00000420316 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.1□□□□□ -0.31
EGFR-204ENST00000420316 TRAV12-1A0A0B4J245 112 aa13.1□□□□□ -0.31
EGFR-204ENST00000420316 ZNF22P17026 224 aaPredicted RBP13.1□□□□□ -0.31
EGFR-204ENST00000420316 HAMPP81172 84 aa13.1□□□□□ -0.31
EGFR-204ENST00000420316 OR10D4PQ8NGN7 298 aa13.1□□□□□ -0.31
EGFR-204ENST00000420316 PMCHL2Q9BQD1 86 aa13.1□□□□□ -0.31
EGFR-204ENST00000420316 IGLV5-45A0A087WSX0 123 aa13.09□□□□□ -0.31
EGFR-204ENST00000420316 Q6ZRU5 148 aa13.09□□□□□ -0.31
EGFR-204ENST00000420316 PACRGQ96M98 296 aaPredicted RBP13.09□□□□□ -0.31
EGFR-204ENST00000420316 RYR1P21817 5038 aa13.08□□□□□ -0.31
EGFR-204ENST00000420316 KIAA0087Q14695 138 aa13.08□□□□□ -0.32
EGFR-204ENST00000420316 CAMK2N2Q96S95 79 aa13.08□□□□□ -0.32
EGFR-204ENST00000420316 FAM30AQ9NZY2 134 aa13.08□□□□□ -0.32
EGFR-204ENST00000420316 DNAH8Q96JB1 4490 aa13.08□□□□□ -0.32
EGFR-204ENST00000420316 SMIM1B2RUZ4 78 aa13.07□□□□□ -0.32
EGFR-204ENST00000420316 SYCNQ0VAF6 134 aa13.07□□□□□ -0.32
EGFR-204ENST00000420316 ODF1Q14990 250 aa13.07□□□□□ -0.32
EGFR-204ENST00000420316 LINC01561Q8N1V8 128 aa13.07□□□□□ -0.32
EGFR-204ENST00000420316 TMEM170BQ5T4T1 132 aa13.07□□□□□ -0.32
EGFR-204ENST00000420316 C10orf25Q5T742 122 aa13.07□□□□□ -0.32
EGFR-204ENST00000420316 C2orf82Q6UX34 121 aa13.07□□□□□ -0.32
EGFR-204ENST00000420316 CARD19Q96LW7 228 aa13.07□□□□□ -0.32
EGFR-204ENST00000420316 F8VRH5 84 aa13.06□□□□□ -0.32
EGFR-204ENST00000420316 MAP1LC3CQ9BXW4 147 aa13.06□□□□□ -0.32
EGFR-204ENST00000420316 UNQ6190/PRO20217Q6UXQ8 127 aa13.05□□□□□ -0.32
EGFR-204ENST00000420316 HSPG2P98160 4391 aa13.04□□□□□ -0.32
EGFR-204ENST00000420316 Q6ZSA8 131 aa13.04□□□□□ -0.32
EGFR-204ENST00000420316 C2orf48Q96LS8 159 aa13.04□□□□□ -0.32
EGFR-204ENST00000420316 PRSS2P07478 247 aa13.03□□□□□ -0.32
EGFR-204ENST00000420316 SDIM1Q6ZPB5 146 aa13.03□□□□□ -0.32
EGFR-204ENST00000420316 H3BRM9 83 aa13.03□□□□□ -0.32
EGFR-204ENST00000420316 PANO1I0J062 215 aa13.03□□□□□ -0.32
EGFR-204ENST00000420316 S100A6P06703 90 aa13.03□□□□□ -0.32
EGFR-204ENST00000420316 XGP55808 180 aa13.03□□□□□ -0.32
EGFR-204ENST00000420316 HIST3H2BBQ8N257 126 aa13.03□□□□□ -0.32
EGFR-204ENST00000420316 HERC2O95714 4834 aa13.02□□□□□ -0.32
EGFR-204ENST00000420316 C6orf226Q5I0X4 101 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms