RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 SDHAF1A6NFY7 115 aa2.13□□□□□ -2.07
SEMA3A-202ENST00000420047 SRP19P09132 144 aaKnown RBP2.13□□□□□ -2.07
SEMA3A-202ENST00000420047 CXCL1P09341 107 aa2.13□□□□□ -2.07
SEMA3A-202ENST00000420047 FGF6P10767 208 aa2.13□□□□□ -2.07
SEMA3A-202ENST00000420047 RAB4AP20338 218 aa2.13□□□□□ -2.07
SEMA3A-202ENST00000420047 PMCHP20382 165 aa2.13□□□□□ -2.07
SEMA3A-202ENST00000420047 XCL1P47992 114 aa2.13□□□□□ -2.07
SEMA3A-202ENST00000420047 CACNG7P62955 275 aa2.13□□□□□ -2.07
SEMA3A-202ENST00000420047 COTL1Q14019 142 aa2.13□□□□□ -2.07
SEMA3A-202ENST00000420047 MIAQ16674 131 aa2.13□□□□□ -2.07
SEMA3A-202ENST00000420047 AMN1Q8IY45 258 aa2.13□□□□□ -2.07
SEMA3A-202ENST00000420047 TYMSOSQ8TAI1 123 aa2.13□□□□□ -2.07
SEMA3A-202ENST00000420047 AP1S3Q96PC3 154 aa2.13□□□□□ -2.07
SEMA3A-202ENST00000420047 DPH3P1Q9H4G8 78 aa2.13□□□□□ -2.07
SEMA3A-202ENST00000420047 RPP21Q9H633 154 aaKnown RBP2.13□□□□□ -2.07
SEMA3A-202ENST00000420047 MANBALQ9NQG1 85 aa2.13□□□□□ -2.07
SEMA3A-202ENST00000420047 DMBT1Q9UGM3 2413 aaPredicted RBP2.13□□□□□ -2.07
SEMA3A-202ENST00000420047 PKHD1L1Q86WI1 4243 aa2.12□□□□□ -2.07
SEMA3A-202ENST00000420047 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
SEMA3A-202ENST00000420047 LINC00959A0A1B0GUT2 108 aa2.12□□□□□ -2.07
SEMA3A-202ENST00000420047 F2Z2F3 143 aa2.12□□□□□ -2.07
SEMA3A-202ENST00000420047 H7C1H1 209 aa2.12□□□□□ -2.07
SEMA3A-202ENST00000420047 UBE2L6O14933 153 aa2.12□□□□□ -2.07
SEMA3A-202ENST00000420047 CCL25O15444 150 aa2.12□□□□□ -2.07
SEMA3A-202ENST00000420047 OXTP01178 125 aa2.12□□□□□ -2.07
SEMA3A-202ENST00000420047 TRGC1P0CF51 173 aa2.12□□□□□ -2.07
SEMA3A-202ENST00000420047 ESDP10768 282 aa2.12□□□□□ -2.07
SEMA3A-202ENST00000420047 CTRLP40313 264 aa2.12□□□□□ -2.07
SEMA3A-202ENST00000420047 POLR2KP53803 58 aaKnown RBP2.12□□□□□ -2.07
SEMA3A-202ENST00000420047 RPS20P60866 119 aaKnown RBP2.12□□□□□ -2.07
SEMA3A-202ENST00000420047 RPL39P62891 51 aaKnown RBP2.12□□□□□ -2.07
SEMA3A-202ENST00000420047 AMMECR1LQ6DCA0 310 aa2.12□□□□□ -2.07
SEMA3A-202ENST00000420047 C5orf38Q86SI9 138 aa2.12□□□□□ -2.07
SEMA3A-202ENST00000420047 SLC51BQ86UW2 128 aa2.12□□□□□ -2.07
SEMA3A-202ENST00000420047 TCTE3Q8IZS6 198 aa2.12□□□□□ -2.07
SEMA3A-202ENST00000420047 SPACA4Q8TDM5 124 aa2.12□□□□□ -2.07
SEMA3A-202ENST00000420047 FAM104AQ969W3 186 aa2.12□□□□□ -2.07
SEMA3A-202ENST00000420047 TCEAL7Q9BRU2 100 aa2.12□□□□□ -2.07
SEMA3A-202ENST00000420047 IGLV4-69A0A075B6H9 119 aa2.11□□□□□ -2.07
SEMA3A-202ENST00000420047 IGHV3-64A0A075B6Q5 118 aa2.11□□□□□ -2.07
SEMA3A-202ENST00000420047 TRAV13-1A0A0B4J241 112 aa2.11□□□□□ -2.07
SEMA3A-202ENST00000420047 FAM168BA1KXE4 195 aa2.11□□□□□ -2.07
SEMA3A-202ENST00000420047 ZNF727A8MUV8 499 aa2.11□□□□□ -2.07
SEMA3A-202ENST00000420047 I3L3M4 83 aa2.11□□□□□ -2.07
SEMA3A-202ENST00000420047 TCAPO15273 167 aa2.11□□□□□ -2.07
SEMA3A-202ENST00000420047 PDE6DO43924 150 aa2.11□□□□□ -2.07
SEMA3A-202ENST00000420047 CNBPP62633 177 aaKnown RBP2.11□□□□□ -2.07
SEMA3A-202ENST00000420047 RPL23P62829 140 aaKnown RBP2.11□□□□□ -2.07
SEMA3A-202ENST00000420047 EIF5AP63241 154 aaKnown RBP2.11□□□□□ -2.07
SEMA3A-202ENST00000420047 CIRBPQ14011 172 aaKnown RBP2.11□□□□□ -2.07
SEMA3A-202ENST00000420047 MRPL51Q4U2R6 128 aaKnown RBP2.11□□□□□ -2.07
SEMA3A-202ENST00000420047 Q6ZRU5 148 aa2.11□□□□□ -2.07
SEMA3A-202ENST00000420047 PHF5AQ7RTV0 110 aaKnown RBP2.11□□□□□ -2.07
SEMA3A-202ENST00000420047 LINC01551Q86U37 167 aa2.11□□□□□ -2.07
SEMA3A-202ENST00000420047 NUP35Q8NFH5 326 aa2.11□□□□□ -2.07
SEMA3A-202ENST00000420047 EIF5A2Q9GZV4 153 aaKnown RBP2.11□□□□□ -2.07
SEMA3A-202ENST00000420047 CDC42SE2Q9NRR3 84 aa2.11□□□□□ -2.07
SEMA3A-202ENST00000420047 PLAC8Q9NZF1 115 aa2.11□□□□□ -2.07
SEMA3A-202ENST00000420047 V9GYV3 84 aa2.11□□□□□ -2.07
SEMA3A-202ENST00000420047 LPAP08519 4548 aa2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 TRAV8-4A0A0B4J246 113 aa2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 XKRY2A2RUG3 117 aa2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 HIGD1CA8MV81 97 aa2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 A8MWL6 223 aa2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 NDUFS6O75380 124 aaKnown RBP2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 APCSP02743 223 aa2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 SRSF9Q13242 221 aaKnown RBP eCLIP2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 ADIRFQ15847 76 aa2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 TMEM97Q5BJF2 176 aa2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 C9orf116Q5BN46 136 aaPredicted RBP2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 MRPL54Q6P161 138 aaKnown RBP2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 UNQ6190/PRO20217Q6UXQ8 127 aa2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 Q6ZUT4 128 aa2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 AKAP14Q86UN6 197 aa2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 ZNF664Q8N3J9 261 aa2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 OR5A1Q8NGJ0 315 aa2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 FAM210AQ96ND0 272 aa2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 SMIM7Q9BQ49 75 aa2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 CNFNQ9BYD5 112 aa2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 ST20Q9HBF5 79 aa2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 UBR4Q5T4S7 5183 aa2.1□□□□□ -2.07
SEMA3A-202ENST00000420047 GVQW2A0A096LPI5 108 aaPredicted RBP2.09□□□□□ -2.07
SEMA3A-202ENST00000420047 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.09□□□□□ -2.07
SEMA3A-202ENST00000420047 TRBV6-5A0A0K0K1A5 114 aa2.09□□□□□ -2.07
SEMA3A-202ENST00000420047 LOC389332A0A1B0GUA5 103 aa2.09□□□□□ -2.07
SEMA3A-202ENST00000420047 A0A1B0GUT8 65 aa2.09□□□□□ -2.07
SEMA3A-202ENST00000420047 NPYP01303 97 aa2.09□□□□□ -2.07
SEMA3A-202ENST00000420047 PRR3P79522 188 aaKnown RBP2.09□□□□□ -2.07
SEMA3A-202ENST00000420047 SYCNQ0VAF6 134 aa2.09□□□□□ -2.07
SEMA3A-202ENST00000420047 SS18Q15532 418 aa2.09□□□□□ -2.07
SEMA3A-202ENST00000420047 TMEM241Q24JQ0 296 aa2.09□□□□□ -2.07
SEMA3A-202ENST00000420047 EIF5AL1Q6IS14 154 aaKnown RBP2.09□□□□□ -2.07
SEMA3A-202ENST00000420047 FAM231DQ6ZW35 169 aa2.09□□□□□ -2.07
SEMA3A-202ENST00000420047 TSKUQ8WUA8 353 aa2.09□□□□□ -2.07
SEMA3A-202ENST00000420047 ISOC2Q96AB3 205 aa2.09□□□□□ -2.07
SEMA3A-202ENST00000420047 C2orf48Q96LS8 159 aa2.09□□□□□ -2.07
SEMA3A-202ENST00000420047 TMEM191AQ9H0A3 160 aa2.09□□□□□ -2.07
SEMA3A-202ENST00000420047 OSTCQ9NRP0 149 aa2.09□□□□□ -2.07
SEMA3A-202ENST00000420047 UBE2D4Q9Y2X8 147 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms