RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 C15orf56Q8N910 161 aa8.69□□□□□ -1.02
TMEM248-203ENST00000418375 TIMM17AQ99595 171 aa8.69□□□□□ -1.02
TMEM248-203ENST00000418375 VCX2Q9H322 139 aa8.69□□□□□ -1.02
TMEM248-203ENST00000418375 LINC00614P0C842 121 aa8.68□□□□□ -1.02
TMEM248-203ENST00000418375 ERASQ7Z444 233 aa8.68□□□□□ -1.02
TMEM248-203ENST00000418375 SCGB3A1Q96QR1 104 aa8.68□□□□□ -1.02
TMEM248-203ENST00000418375 GVQW2A0A096LPI5 108 aaPredicted RBP8.67□□□□□ -1.02
TMEM248-203ENST00000418375 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.67□□□□□ -1.02
TMEM248-203ENST00000418375 CNBPP62633 177 aaKnown RBP8.67□□□□□ -1.02
TMEM248-203ENST00000418375 HIGD2BQ4VC39 106 aa8.67□□□□□ -1.02
TMEM248-203ENST00000418375 AMELXQ99217 191 aa8.67□□□□□ -1.02
TMEM248-203ENST00000418375 APOMO95445 188 aa8.66□□□□□ -1.02
TMEM248-203ENST00000418375 TRGC2P03986 189 aa8.66□□□□□ -1.02
TMEM248-203ENST00000418375 LINC01620Q4KN68 170 aa8.66□□□□□ -1.02
TMEM248-203ENST00000418375 C5orf38Q86SI9 138 aa8.66□□□□□ -1.02
TMEM248-203ENST00000418375 COLCA2A8K830 154 aa8.65□□□□□ -1.02
TMEM248-203ENST00000418375 UBE2D1P51668 147 aa8.65□□□□□ -1.02
TMEM248-203ENST00000418375 C9orf163Q8N9P6 203 aa8.65□□□□□ -1.02
TMEM248-203ENST00000418375 IGHV3OR16-9A0A0B4J2B5 98 aa8.64□□□□□ -1.03
TMEM248-203ENST00000418375 ZNF561-AS1K7EIQ3 104 aa8.64□□□□□ -1.03
TMEM248-203ENST00000418375 HBDP02042 147 aa8.64□□□□□ -1.03
TMEM248-203ENST00000418375 INAFM2P0DMQ5 153 aa8.64□□□□□ -1.03
TMEM248-203ENST00000418375 SEC11AP67812 179 aa8.64□□□□□ -1.03
TMEM248-203ENST00000418375 LINC00242Q5T6M2 205 aa8.64□□□□□ -1.03
TMEM248-203ENST00000418375 ZC2HC1BQ5TFG8 222 aa8.64□□□□□ -1.03
TMEM248-203ENST00000418375 Q5VSD8 79 aa8.64□□□□□ -1.03
TMEM248-203ENST00000418375 LINC00173Q6ZV60 143 aa8.64□□□□□ -1.03
TMEM248-203ENST00000418375 CHCHD1Q96BP2 118 aaKnown RBP8.64□□□□□ -1.03
TMEM248-203ENST00000418375 URB1-AS1Q96HZ7 61 aa8.64□□□□□ -1.03
TMEM248-203ENST00000418375 FAT1Q14517 4588 aa8.63□□□□□ -1.03
TMEM248-203ENST00000418375 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.63□□□□□ -1.03
TMEM248-203ENST00000418375 SCO1O75880 301 aa8.63□□□□□ -1.03
TMEM248-203ENST00000418375 IGHV3-64A0A075B6Q5 118 aa8.62□□□□□ -1.03
TMEM248-203ENST00000418375 SMR3BP02814 79 aaPredicted RBP8.62□□□□□ -1.03
TMEM248-203ENST00000418375 SLPIP03973 132 aa8.62□□□□□ -1.03
TMEM248-203ENST00000418375 Q6ZSA8 131 aa8.62□□□□□ -1.03
TMEM248-203ENST00000418375 BAGE3Q86Y29 109 aa8.62□□□□□ -1.03
TMEM248-203ENST00000418375 FAM30AQ9NZY2 134 aa8.62□□□□□ -1.03
TMEM248-203ENST00000418375 A0A087WZ39 114 aa8.61□□□□□ -1.03
TMEM248-203ENST00000418375 A0A096LNJ9 63 aa8.61□□□□□ -1.03
TMEM248-203ENST00000418375 COX6A2Q02221 97 aa8.61□□□□□ -1.03
TMEM248-203ENST00000418375 SPAG11BQ08648 103 aa8.61□□□□□ -1.03
TMEM248-203ENST00000418375 PMCHL1Q16048 86 aa8.61□□□□□ -1.03
TMEM248-203ENST00000418375 FAM19A3Q7Z5A8 133 aa8.61□□□□□ -1.03
TMEM248-203ENST00000418375 OR10D4PQ8NGN7 298 aa8.61□□□□□ -1.03
TMEM248-203ENST00000418375 GEMIN7Q9H840 131 aaKnown RBP8.61□□□□□ -1.03
TMEM248-203ENST00000418375 IGLV4-69A0A075B6H9 119 aa8.6□□□□□ -1.03
TMEM248-203ENST00000418375 FAM229AH3BQW9 127 aa8.6□□□□□ -1.03
TMEM248-203ENST00000418375 ATP5LO75964 103 aa8.6□□□□□ -1.03
TMEM248-203ENST00000418375 HERVK_113P63121 156 aa8.6□□□□□ -1.03
TMEM248-203ENST00000418375 HAMPP81172 84 aa8.6□□□□□ -1.03
TMEM248-203ENST00000418375 PMVKQ15126 192 aa8.6□□□□□ -1.03
TMEM248-203ENST00000418375 LINC01561Q8N1V8 128 aa8.6□□□□□ -1.03
TMEM248-203ENST00000418375 ORAOV1Q8WV07 137 aa8.6□□□□□ -1.03
TMEM248-203ENST00000418375 LINC00526Q96FQ7 95 aa8.6□□□□□ -1.03
TMEM248-203ENST00000418375 CARD19Q96LW7 228 aa8.6□□□□□ -1.03
TMEM248-203ENST00000418375 HSBP1O75506 76 aa8.59□□□□□ -1.03
TMEM248-203ENST00000418375 S100A1P23297 94 aa8.59□□□□□ -1.03
TMEM248-203ENST00000418375 SYCNQ0VAF6 134 aa8.59□□□□□ -1.03
TMEM248-203ENST00000418375 PDZD11Q5EBL8 140 aa8.59□□□□□ -1.03
TMEM248-203ENST00000418375 SDIM1Q6ZPB5 146 aa8.59□□□□□ -1.03
TMEM248-203ENST00000418375 C2orf48Q96LS8 159 aa8.59□□□□□ -1.03
TMEM248-203ENST00000418375 CAMK2N2Q96S95 79 aa8.59□□□□□ -1.03
TMEM248-203ENST00000418375 CST9LQ9H4G1 147 aa8.59□□□□□ -1.03
TMEM248-203ENST00000418375 PKIGQ9Y2B9 76 aa8.59□□□□□ -1.03
TMEM248-203ENST00000418375 A0A0J9YXV3 536 aa8.58□□□□□ -1.04
TMEM248-203ENST00000418375 F8WDY8 70 aa8.58□□□□□ -1.04
TMEM248-203ENST00000418375 NDUFA6P56556 154 aa8.58□□□□□ -1.04
TMEM248-203ENST00000418375 TINCRA0A1B0GVN0 87 aa8.57□□□□□ -1.04
TMEM248-203ENST00000418375 PACRGQ96M98 296 aaPredicted RBP8.57□□□□□ -1.04
TMEM248-203ENST00000418375 CHAC1Q9BUX1 264 aa8.57□□□□□ -1.04
TMEM248-203ENST00000418375 LINC00469Q8N7U9 141 aa8.56□□□□□ -1.04
TMEM248-203ENST00000418375 HERC1Q15751 4861 aa8.55□□□□□ -1.04
TMEM248-203ENST00000418375 SERF1AO75920 110 aa8.55□□□□□ -1.04
TMEM248-203ENST00000418375 Q6ZRU5 148 aa8.55□□□□□ -1.04
TMEM248-203ENST00000418375 SCXQ7RTU7 201 aa8.55□□□□□ -1.04
TMEM248-203ENST00000418375 CDKN2A-AS1Q9UH64 79 aa8.55□□□□□ -1.04
TMEM248-203ENST00000418375 VPS13BQ7Z7G8 4022 aa8.55□□□□□ -1.04
TMEM248-203ENST00000418375 IGLV5-45A0A087WSX0 123 aa8.54□□□□□ -1.04
TMEM248-203ENST00000418375 NDUFA1O15239 70 aa8.54□□□□□ -1.04
TMEM248-203ENST00000418375 ATP6V1G1O75348 118 aa8.54□□□□□ -1.04
TMEM248-203ENST00000418375 PRSS2P07478 247 aa8.54□□□□□ -1.04
TMEM248-203ENST00000418375 LORP23490 312 aaPredicted RBP8.54□□□□□ -1.04
TMEM248-203ENST00000418375 FAM19A2Q8N3H0 131 aa8.54□□□□□ -1.04
TMEM248-203ENST00000418375 IFI27L1Q96BM0 104 aa8.54□□□□□ -1.04
TMEM248-203ENST00000418375 DPH3Q96FX2 82 aa8.54□□□□□ -1.04
TMEM248-203ENST00000418375 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.54□□□□□ -1.04
TMEM248-203ENST00000418375 SRRM2Q9UQ35 2752 aaKnown RBP8.54□□□□□ -1.04
TMEM248-203ENST00000418375 DMBT1Q9UGM3 2413 aaPredicted RBP8.53□□□□□ -1.04
TMEM248-203ENST00000418375 RNF151Q2KHN1 245 aa8.53□□□□□ -1.04
TMEM248-203ENST00000418375 CIRBP-AS1Q8TBR5 109 aa8.53□□□□□ -1.04
TMEM248-203ENST00000418375 MRPL35Q9NZE8 188 aaKnown RBP8.53□□□□□ -1.04
TMEM248-203ENST00000418375 DNAH8Q96JB1 4490 aa8.52□□□□□ -1.05
TMEM248-203ENST00000418375 LOC107984640A0A0U1RRK4 108 aa8.52□□□□□ -1.05
TMEM248-203ENST00000418375 H3BRM9 83 aa8.52□□□□□ -1.05
TMEM248-203ENST00000418375 CHTF8P0CG12 524 aa8.52□□□□□ -1.05
TMEM248-203ENST00000418375 IGLC3P0DOY3 106 aa8.52□□□□□ -1.05
TMEM248-203ENST00000418375 LINC00310P59036 64 aa8.52□□□□□ -1.05
TMEM248-203ENST00000418375 CIRBPQ14011 172 aaKnown RBP8.52□□□□□ -1.05
TMEM248-203ENST00000418375 KIAA0087Q14695 138 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms