RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 UBE2D2P62837 147 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 PMVKQ15126 192 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 DEFB121Q5J5C9 76 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 AMMECR1LQ6DCA0 310 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 BAALCQ8WXS3 180 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 TMEM101Q96IK0 257 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 FAM218AQ96MZ4 157 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 TMEM243Q9BU79 118 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 C11orf68Q9H3H3 251 aaKnown RBP2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 SPANXA1Q9NS26 97 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 UQCR10Q9UDW1 63 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 PRO0255Q9UI72 69 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 CELA1Q9UNI1 258 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 HHLA3Q9XRX5 114 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 C2CD3Q4AC94 2353 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 MAP1AP78559 2803 aaPredicted RBP2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 MTORP42345 2549 aa2.62□□□□□ -1.99
HMGB3P20-201ENST00000417997 CUBNO60494 3623 aa2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 SETXQ7Z333 2677 aaKnown RBP2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 NOTCH2Q04721 2471 aa2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 IGLV4-3A0A075B6K6 122 aa2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 A0A0J9YY99 117 aa2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 IGIPA6NJ69 53 aa2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 PRB2P02812 416 aaPredicted RBP2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 NMUP48645 174 aa2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 CRYBA4P53673 196 aa2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 TCTAP57738 103 aa2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 DEFA6Q01524 100 aa2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 MAJINQ3KP22 176 aa2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 Q6ZUT4 128 aa2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 OR5A1Q8NGJ0 315 aa2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 ATP6V0E2Q8NHE4 81 aa2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 MRAPQ8TCY5 172 aa2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 MIEN1Q9BRT3 115 aa2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 CHCHD7Q9BUK0 85 aa2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 CHAC1Q9BUX1 264 aa2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 GTSF1LQ9H1H1 148 aa2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 VCX2Q9H322 139 aa2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 MRPL35Q9NZE8 188 aaKnown RBP2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 ICOSQ9Y6W8 199 aa2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 SORL1Q92673 2214 aa2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 OBSCNQ5VST9 7968 aa2.61□□□□□ -1.99
HMGB3P20-201ENST00000417997 TRAV26-1A0A087WT03 109 aa2.6□□□□□ -1.99
HMGB3P20-201ENST00000417997 A0A096LPF7 62 aa2.6□□□□□ -1.99
HMGB3P20-201ENST00000417997 K7EIL1 84 aa2.6□□□□□ -1.99
HMGB3P20-201ENST00000417997 LINC00694P0DN24 101 aa2.6□□□□□ -1.99
HMGB3P20-201ENST00000417997 IGLC3P0DOY3 106 aa2.6□□□□□ -1.99
HMGB3P20-201ENST00000417997 FGF6P10767 208 aa2.6□□□□□ -1.99
HMGB3P20-201ENST00000417997 ZNF25P17030 456 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P20-201ENST00000417997 MRPL23Q16540 153 aaKnown RBP2.6□□□□□ -1.99
HMGB3P20-201ENST00000417997 KRTAP13-3Q3SY46 172 aa2.6□□□□□ -1.99
HMGB3P20-201ENST00000417997 RNASE13Q5GAN3 156 aaKnown RBP2.6□□□□□ -1.99
HMGB3P20-201ENST00000417997 TMEM170BQ5T4T1 132 aa2.6□□□□□ -1.99
HMGB3P20-201ENST00000417997 LCE3AQ5TA76 89 aa2.6□□□□□ -1.99
HMGB3P20-201ENST00000417997 SLC25A34Q6PIV7 304 aa2.6□□□□□ -1.99
HMGB3P20-201ENST00000417997 CEMP1Q6PRD7 247 aaPredicted RBP2.6□□□□□ -1.99
HMGB3P20-201ENST00000417997 C14orf144Q96I85 54 aa2.6□□□□□ -1.99
HMGB3P20-201ENST00000417997 TIMM21Q9BVV7 248 aa2.6□□□□□ -1.99
HMGB3P20-201ENST00000417997 CST9LQ9H4G1 147 aa2.6□□□□□ -1.99
HMGB3P20-201ENST00000417997 GEMIN7Q9H840 131 aaKnown RBP2.6□□□□□ -1.99
HMGB3P20-201ENST00000417997 Q9H8V8 135 aa2.6□□□□□ -1.99
HMGB3P20-201ENST00000417997 Q9UF83 564 aa2.6□□□□□ -1.99
HMGB3P20-201ENST00000417997 UBE2D4Q9Y2X8 147 aa2.6□□□□□ -1.99
HMGB3P20-201ENST00000417997 IGLV4-69A0A075B6H9 119 aa2.59□□□□□ -1.99
HMGB3P20-201ENST00000417997 TRBV6-8A0A0A6YYG3 113 aa2.59□□□□□ -1.99
HMGB3P20-201ENST00000417997 C11orf86A6NJI1 115 aa2.59□□□□□ -1.99
HMGB3P20-201ENST00000417997 LINC00587B1AMM8 73 aa2.59□□□□□ -1.99
HMGB3P20-201ENST00000417997 TMEM262E9PQX1 116 aa2.59□□□□□ -1.99
HMGB3P20-201ENST00000417997 COX8AP10176 69 aa2.59□□□□□ -1.99
HMGB3P20-201ENST00000417997 LGALS3P17931 250 aaKnown RBP2.59□□□□□ -1.99
HMGB3P20-201ENST00000417997 SEC11AP67812 179 aa2.59□□□□□ -1.99
HMGB3P20-201ENST00000417997 MRPS36P82909 103 aaKnown RBP2.59□□□□□ -1.99
HMGB3P20-201ENST00000417997 BATFQ16520 125 aa2.59□□□□□ -1.99
HMGB3P20-201ENST00000417997 C12orf74Q32Q52 190 aa2.59□□□□□ -1.99
HMGB3P20-201ENST00000417997 KPRPQ5T749 579 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P20-201ENST00000417997 NTM-AS1Q6ZSK4 140 aa2.59□□□□□ -1.99
HMGB3P20-201ENST00000417997 MRPL52Q86TS9 123 aaKnown RBP2.59□□□□□ -1.99
HMGB3P20-201ENST00000417997 SBSPONQ8IVN8 264 aa2.59□□□□□ -1.99
HMGB3P20-201ENST00000417997 TM2D3Q9BRN9 247 aa2.59□□□□□ -1.99
HMGB3P20-201ENST00000417997 IGHV3-64A0A075B6Q5 118 aa2.58□□□□□ -2
HMGB3P20-201ENST00000417997 DEFB131BA0A096LNP1 70 aa2.58□□□□□ -2
HMGB3P20-201ENST00000417997 TRAV10A0A0B4J240 114 aa2.58□□□□□ -2
HMGB3P20-201ENST00000417997 TRAV13-1A0A0B4J241 112 aa2.58□□□□□ -2
HMGB3P20-201ENST00000417997 TRAV8-6A0A0B4J262 113 aa2.58□□□□□ -2
HMGB3P20-201ENST00000417997 IGKV3OR2-268A0A0C4DH90 116 aa2.58□□□□□ -2
HMGB3P20-201ENST00000417997 A0A0J9YXV3 536 aa2.58□□□□□ -2
HMGB3P20-201ENST00000417997 ZNF815PA8K554 130 aa2.58□□□□□ -2
HMGB3P20-201ENST00000417997 E9PLD3 99 aa2.58□□□□□ -2
HMGB3P20-201ENST00000417997 H3BRM9 83 aa2.58□□□□□ -2
HMGB3P20-201ENST00000417997 M0R143 59 aa2.58□□□□□ -2
HMGB3P20-201ENST00000417997 KRTAP1-4P0C5Y4 121 aa2.58□□□□□ -2
HMGB3P20-201ENST00000417997 ZNF22P17026 224 aaPredicted RBP2.58□□□□□ -2
HMGB3P20-201ENST00000417997 UBE2D1P51668 147 aa2.58□□□□□ -2
HMGB3P20-201ENST00000417997 SCGB1D4Q6XE38 83 aa2.58□□□□□ -2
HMGB3P20-201ENST00000417997 TYMSOSQ8TAI1 123 aa2.58□□□□□ -2
HMGB3P20-201ENST00000417997 PLEKHB2Q96CS7 222 aa2.58□□□□□ -2
HMGB3P20-201ENST00000417997 VSIG2Q96IQ7 327 aa2.58□□□□□ -2
HMGB3P20-201ENST00000417997 AMELXQ99217 191 aa2.58□□□□□ -2
HMGB3P20-201ENST00000417997 TP73-AS1Q9UF72 201 aa2.58□□□□□ -2
HMGB3P20-201ENST00000417997 CSDC2Q9Y534 153 aaKnown RBP2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms