RNA–Protein interactions for RNA: ENST00000417814.3

TNFRSF8-203, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 3,593 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-203ENST00000417814 VSIG2Q96IQ7 327 aa9.55□□□□□ -0.88
TNFRSF8-203ENST00000417814 MED14OSP0DP75 135 aa9.55□□□□□ -0.88
TNFRSF8-203ENST00000417814 LINC00526Q96FQ7 95 aa9.55□□□□□ -0.88
TNFRSF8-203ENST00000417814 BBC3Q96PG8 261 aaPredicted RBP9.55□□□□□ -0.88
TNFRSF8-203ENST00000417814 FAM236AA0A1B0GUQ0 79 aa9.54□□□□□ -0.88
TNFRSF8-203ENST00000417814 FAM236BA0A1B0GV22 79 aa9.54□□□□□ -0.88
TNFRSF8-203ENST00000417814 PRORYQ9H606 182 aa9.54□□□□□ -0.88
TNFRSF8-203ENST00000417814 UBE2D4Q9Y2X8 147 aa9.54□□□□□ -0.88
TNFRSF8-203ENST00000417814 H7C423 109 aa9.53□□□□□ -0.88
TNFRSF8-203ENST00000417814 ODF3Q96PU9 254 aa9.53□□□□□ -0.88
TNFRSF8-203ENST00000417814 CHCHD7Q9BUK0 85 aa9.53□□□□□ -0.88
TNFRSF8-203ENST00000417814 LOC107984640A0A0U1RRK4 108 aa9.53□□□□□ -0.88
TNFRSF8-203ENST00000417814 MAST4O15021 2626 aa9.52□□□□□ -0.89
TNFRSF8-203ENST00000417814 TRBV6-5A0A0K0K1A5 114 aa9.52□□□□□ -0.89
TNFRSF8-203ENST00000417814 CCL24O00175 119 aa9.52□□□□□ -0.89
TNFRSF8-203ENST00000417814 DEFB114Q30KQ6 69 aa9.52□□□□□ -0.89
TNFRSF8-203ENST00000417814 ZNF469Q96JG9 3925 aaPredicted RBP9.52□□□□□ -0.89
TNFRSF8-203ENST00000417814 SMR3AQ99954 134 aa9.52□□□□□ -0.89
TNFRSF8-203ENST00000417814 IGHV4-31P0DP07 118 aa9.51□□□□□ -0.89
TNFRSF8-203ENST00000417814 PRR3P79522 188 aaKnown RBP9.51□□□□□ -0.89
TNFRSF8-203ENST00000417814 MIR7-3HGQ8N6C7 128 aa9.51□□□□□ -0.89
TNFRSF8-203ENST00000417814 MGAM2Q2M2H8 2515 aa9.51□□□□□ -0.89
TNFRSF8-203ENST00000417814 ODF3L2Q3SX64 289 aa9.51□□□□□ -0.89
TNFRSF8-203ENST00000417814 SBSPONQ8IVN8 264 aa9.51□□□□□ -0.89
TNFRSF8-203ENST00000417814 DNAL4O96015 105 aa9.5□□□□□ -0.89
TNFRSF8-203ENST00000417814 MIAQ16674 131 aa9.5□□□□□ -0.89
TNFRSF8-203ENST00000417814 IGKV3D-7A0A0C4DH55 119 aa9.5□□□□□ -0.89
TNFRSF8-203ENST00000417814 TRBV10-2A0A0K0K1G8 114 aa9.5□□□□□ -0.89
TNFRSF8-203ENST00000417814 BAALC-AS2P0C853 105 aa9.5□□□□□ -0.89
TNFRSF8-203ENST00000417814 C6orf226Q5I0X4 101 aa9.5□□□□□ -0.89
TNFRSF8-203ENST00000417814 KLK5Q9Y337 293 aaPredicted RBP9.5□□□□□ -0.89
TNFRSF8-203ENST00000417814 LINC00242Q5T6M2 205 aa9.49□□□□□ -0.89
TNFRSF8-203ENST00000417814 LINC00308Q8TCZ7 52 aa9.49□□□□□ -0.89
TNFRSF8-203ENST00000417814 TMEM126AQ9H061 195 aa9.49□□□□□ -0.89
TNFRSF8-203ENST00000417814 Q6YL49 198 aa9.48□□□□□ -0.89
TNFRSF8-203ENST00000417814 C1orf158Q8N1D5 194 aa9.48□□□□□ -0.89
TNFRSF8-203ENST00000417814 MRPS36P82909 103 aaKnown RBP9.48□□□□□ -0.89
TNFRSF8-203ENST00000417814 Q6Q795 121 aa9.48□□□□□ -0.89
TNFRSF8-203ENST00000417814 BAHCC1Q9P281 2608 aa9.48□□□□□ -0.89
TNFRSF8-203ENST00000417814 LINC00482Q8N8I6 264 aa9.47□□□□□ -0.89
TNFRSF8-203ENST00000417814 SOSTDC1Q6X4U4 206 aa9.47□□□□□ -0.89
TNFRSF8-203ENST00000417814 EDA2RQ9HAV5 297 aa9.47□□□□□ -0.89
TNFRSF8-203ENST00000417814 TMEM89A2RUT3 159 aa9.47□□□□□ -0.89
TNFRSF8-203ENST00000417814 CRPP02741 224 aa9.47□□□□□ -0.89
TNFRSF8-203ENST00000417814 NTM-AS1Q6ZSK4 140 aa9.47□□□□□ -0.89
TNFRSF8-203ENST00000417814 TMEM243Q9BU79 118 aa9.47□□□□□ -0.89
TNFRSF8-203ENST00000417814 A0A0B4J2C4 111 aa9.46□□□□□ -0.89
TNFRSF8-203ENST00000417814 DAZ2Q13117 558 aaKnown RBP9.46□□□□□ -0.89
TNFRSF8-203ENST00000417814 DAZ4Q86SG3 579 aaKnown RBP9.46□□□□□ -0.89
TNFRSF8-203ENST00000417814 DAZ3Q9NR90 486 aaKnown RBP9.46□□□□□ -0.89
TNFRSF8-203ENST00000417814 IGLV4-60A0A075B6I1 120 aa9.46□□□□□ -0.9
TNFRSF8-203ENST00000417814 COL6A5A8TX70 2615 aa9.46□□□□□ -0.9
TNFRSF8-203ENST00000417814 STAB1Q9NY15 2570 aa9.46□□□□□ -0.9
TNFRSF8-203ENST00000417814 CSDC2Q9Y534 153 aaKnown RBP9.46□□□□□ -0.9
TNFRSF8-203ENST00000417814 PF4P02776 101 aa9.45□□□□□ -0.9
TNFRSF8-203ENST00000417814 C14orf132Q9NPU4 83 aa9.45□□□□□ -0.9
TNFRSF8-203ENST00000417814 SPANXA1Q9NS26 97 aa9.45□□□□□ -0.9
TNFRSF8-203ENST00000417814 K7EQD1 137 aa9.45□□□□□ -0.9
TNFRSF8-203ENST00000417814 FAM104AQ969W3 186 aa9.45□□□□□ -0.9
TNFRSF8-203ENST00000417814 SND1-IT1Q9HBX3 110 aa9.45□□□□□ -0.9
TNFRSF8-203ENST00000417814 DNAJC9-AS1A6NH13 148 aa9.44□□□□□ -0.9
TNFRSF8-203ENST00000417814 Q8N3U1 123 aa9.44□□□□□ -0.9
TNFRSF8-203ENST00000417814 HERVK_113P63121 156 aa9.44□□□□□ -0.9
TNFRSF8-203ENST00000417814 LITAFQ99732 161 aa9.44□□□□□ -0.9
TNFRSF8-203ENST00000417814 AKAP9Q99996 3911 aa9.44□□□□□ -0.9
TNFRSF8-203ENST00000417814 HIST1H4AP62805 103 aaKnown RBP9.44□□□□□ -0.9
TNFRSF8-203ENST00000417814 TENM1Q9UKZ4 2725 aa9.43□□□□□ -0.9
TNFRSF8-203ENST00000417814 LECT2O14960 151 aa9.43□□□□□ -0.9
TNFRSF8-203ENST00000417814 DEFB113Q30KQ7 82 aa9.43□□□□□ -0.9
TNFRSF8-203ENST00000417814 C5orf47Q569G3 176 aa9.43□□□□□ -0.9
TNFRSF8-203ENST00000417814 C9orf116Q5BN46 136 aaPredicted RBP9.42□□□□□ -0.9
TNFRSF8-203ENST00000417814 C11orf72Q8NBR9 251 aa9.42□□□□□ -0.9
TNFRSF8-203ENST00000417814 FAM218AQ96MZ4 157 aa9.42□□□□□ -0.9
TNFRSF8-203ENST00000417814 TRBV30A0A0K0K1B3 111 aa9.42□□□□□ -0.9
TNFRSF8-203ENST00000417814 SMIM1B2RUZ4 78 aa9.42□□□□□ -0.9
TNFRSF8-203ENST00000417814 SDIM1Q6ZPB5 146 aa9.42□□□□□ -0.9
TNFRSF8-203ENST00000417814 FBN1P35555 2871 aaKnown RBP9.41□□□□□ -0.9
TNFRSF8-203ENST00000417814 NCR3O14931 201 aa9.41□□□□□ -0.9
TNFRSF8-203ENST00000417814 GYPEP15421 78 aa9.41□□□□□ -0.9
TNFRSF8-203ENST00000417814 A8MTW9 85 aa9.41□□□□□ -0.9
TNFRSF8-203ENST00000417814 WFDC9Q8NEX5 89 aa9.41□□□□□ -0.9
TNFRSF8-203ENST00000417814 DSCR9P59020 149 aa9.4□□□□□ -0.9
TNFRSF8-203ENST00000417814 FAM19A5Q7Z5A7 132 aaPredicted RBP9.4□□□□□ -0.9
TNFRSF8-203ENST00000417814 DNAJC30Q96LL9 226 aa9.4□□□□□ -0.9
TNFRSF8-203ENST00000417814 LST1O00453 97 aa9.39□□□□□ -0.91
TNFRSF8-203ENST00000417814 SMIM9A6NGZ8 99 aa9.39□□□□□ -0.91
TNFRSF8-203ENST00000417814 J3KT08 172 aa9.39□□□□□ -0.91
TNFRSF8-203ENST00000417814 C3orf22Q8N5N4 141 aa9.39□□□□□ -0.91
TNFRSF8-203ENST00000417814 DEFB135Q30KP9 77 aa9.39□□□□□ -0.91
TNFRSF8-203ENST00000417814 PYGO1Q9Y3Y4 419 aa9.39□□□□□ -0.91
TNFRSF8-203ENST00000417814 CR1P17927 2039 aa9.38□□□□□ -0.91
TNFRSF8-203ENST00000417814 COX7B2Q8TF08 81 aa9.38□□□□□ -0.91
TNFRSF8-203ENST00000417814 PKD1L1Q8TDX9 2849 aa9.38□□□□□ -0.91
TNFRSF8-203ENST00000417814 TENM4Q6N022 2769 aa9.38□□□□□ -0.91
TNFRSF8-203ENST00000417814 A0A087WVE0 104 aa9.38□□□□□ -0.91
TNFRSF8-203ENST00000417814 ANGP03950 147 aaKnown RBP9.38□□□□□ -0.91
TNFRSF8-203ENST00000417814 C4orf3Q8WVX3 66 aa9.38□□□□□ -0.91
TNFRSF8-203ENST00000417814 A0A087WYN8 130 aa9.37□□□□□ -0.91
TNFRSF8-203ENST00000417814 H3BT86 120 aa9.37□□□□□ -0.91
TNFRSF8-203ENST00000417814 MALP21145 153 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms