RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 SMDT1Q9H4I9 107 aa4.67□□□□□ -1.66
HLA-DPA1-241ENST00000417724 HIGD1CA8MV81 97 aa4.66□□□□□ -1.66
HLA-DPA1-241ENST00000417724 RGS21Q2M5E4 152 aa4.66□□□□□ -1.66
HLA-DPA1-241ENST00000417724 KRTAP7-1Q8IUC3 87 aa4.66□□□□□ -1.66
HLA-DPA1-241ENST00000417724 AMN1Q8IY45 258 aa4.66□□□□□ -1.66
HLA-DPA1-241ENST00000417724 C6orf48Q9UBA6 75 aa4.66□□□□□ -1.66
HLA-DPA1-241ENST00000417724 TMEM250H0YL14 139 aa4.65□□□□□ -1.67
HLA-DPA1-241ENST00000417724 SMKR1H3BMG3 65 aa4.65□□□□□ -1.67
HLA-DPA1-241ENST00000417724 PPP1R2P9O14990 202 aa4.65□□□□□ -1.67
HLA-DPA1-241ENST00000417724 NRACQ8N912 160 aa4.65□□□□□ -1.67
HLA-DPA1-241ENST00000417724 BATF3Q9NR55 127 aa4.65□□□□□ -1.67
HLA-DPA1-241ENST00000417724 TGIF2-C20orf24A0A0A6YYL0 155 aa4.64□□□□□ -1.67
HLA-DPA1-241ENST00000417724 TRBV30A0A0K0K1B3 111 aa4.64□□□□□ -1.67
HLA-DPA1-241ENST00000417724 NDUFC2-KCTD14E9PQ53 114 aa4.64□□□□□ -1.67
HLA-DPA1-241ENST00000417724 TCAPO15273 167 aa4.64□□□□□ -1.67
HLA-DPA1-241ENST00000417724 RIGQ13278 110 aa4.64□□□□□ -1.67
HLA-DPA1-241ENST00000417724 PACRGQ96M98 296 aaPredicted RBP4.64□□□□□ -1.67
HLA-DPA1-241ENST00000417724 SPANXA1Q9NS26 97 aa4.64□□□□□ -1.67
HLA-DPA1-241ENST00000417724 IFITM10A6NMD0 228 aa4.63□□□□□ -1.67
HLA-DPA1-241ENST00000417724 NUPR1O60356 82 aa4.63□□□□□ -1.67
HLA-DPA1-241ENST00000417724 CRYGAP11844 174 aa4.63□□□□□ -1.67
HLA-DPA1-241ENST00000417724 RPL39P62891 51 aaKnown RBP4.63□□□□□ -1.67
HLA-DPA1-241ENST00000417724 HBBP68871 147 aa4.63□□□□□ -1.67
HLA-DPA1-241ENST00000417724 MRPS36P82909 103 aaKnown RBP4.63□□□□□ -1.67
HLA-DPA1-241ENST00000417724 KIAA0087Q14695 138 aa4.63□□□□□ -1.67
HLA-DPA1-241ENST00000417724 C9orf129Q5T035 196 aaKnown RBP4.63□□□□□ -1.67
HLA-DPA1-241ENST00000417724 TYMSOSQ8TAI1 123 aa4.63□□□□□ -1.67
HLA-DPA1-241ENST00000417724 C20orf78Q9BR46 151 aa4.63□□□□□ -1.67
HLA-DPA1-241ENST00000417724 LINC00862A6NCI5 91 aa4.62□□□□□ -1.67
HLA-DPA1-241ENST00000417724 RPL28P46779 137 aaKnown RBP4.62□□□□□ -1.67
HLA-DPA1-241ENST00000417724 CEBPGP53567 150 aa4.62□□□□□ -1.67
HLA-DPA1-241ENST00000417724 RPL32P62910 135 aaKnown RBP4.62□□□□□ -1.67
HLA-DPA1-241ENST00000417724 LBHQ53QV2 105 aaPredicted RBP4.62□□□□□ -1.67
HLA-DPA1-241ENST00000417724 C2orf82Q6UX34 121 aa4.62□□□□□ -1.67
HLA-DPA1-241ENST00000417724 FAM104AQ969W3 186 aa4.62□□□□□ -1.67
HLA-DPA1-241ENST00000417724 CTDSP1Q9GZU7 261 aa4.62□□□□□ -1.67
HLA-DPA1-241ENST00000417724 CDIP1Q9H305 208 aa4.62□□□□□ -1.67
HLA-DPA1-241ENST00000417724 OSTCQ9NRP0 149 aa4.62□□□□□ -1.67
HLA-DPA1-241ENST00000417724 TRBV24-1A0A075B6N3 115 aa4.61□□□□□ -1.67
HLA-DPA1-241ENST00000417724 A0A087X002 238 aa4.61□□□□□ -1.67
HLA-DPA1-241ENST00000417724 CKS2P33552 79 aa4.61□□□□□ -1.67
HLA-DPA1-241ENST00000417724 MRPL51Q4U2R6 128 aaKnown RBP4.61□□□□□ -1.67
HLA-DPA1-241ENST00000417724 FAM104BQ5XKR9 115 aa4.61□□□□□ -1.67
HLA-DPA1-241ENST00000417724 SLC51BQ86UW2 128 aa4.61□□□□□ -1.67
HLA-DPA1-241ENST00000417724 SMIM7Q9BQ49 75 aa4.61□□□□□ -1.67
HLA-DPA1-241ENST00000417724 C22orf24Q9Y442 160 aa4.61□□□□□ -1.67
HLA-DPA1-241ENST00000417724 FAT4Q6V0I7 4981 aa4.61□□□□□ -1.67
HLA-DPA1-241ENST00000417724 ZNF727A8MUV8 499 aa4.6□□□□□ -1.67
HLA-DPA1-241ENST00000417724 TNFRSF6BO95407 300 aa4.6□□□□□ -1.67
HLA-DPA1-241ENST00000417724 CKS1BP61024 79 aa4.6□□□□□ -1.67
HLA-DPA1-241ENST00000417724 LINC00242Q5T6M2 205 aa4.6□□□□□ -1.67
HLA-DPA1-241ENST00000417724 LINC01551Q86U37 167 aa4.6□□□□□ -1.67
HLA-DPA1-241ENST00000417724 BCE1O60756 84 aa4.59□□□□□ -1.67
HLA-DPA1-241ENST00000417724 PRSS2P07478 247 aa4.59□□□□□ -1.67
HLA-DPA1-241ENST00000417724 IFI27P40305 119 aaPredicted RBP4.59□□□□□ -1.67
HLA-DPA1-241ENST00000417724 BLOC1S1P78537 153 aa4.59□□□□□ -1.67
HLA-DPA1-241ENST00000417724 TPRXLQ17RH7 258 aa4.59□□□□□ -1.67
HLA-DPA1-241ENST00000417724 LINC01561Q8N1V8 128 aa4.59□□□□□ -1.67
HLA-DPA1-241ENST00000417724 RETNLBQ9BQ08 111 aa4.59□□□□□ -1.67
HLA-DPA1-241ENST00000417724 SMIM2Q9BVW6 85 aa4.59□□□□□ -1.67
HLA-DPA1-241ENST00000417724 NAT8BQ9UHF3 227 aa4.59□□□□□ -1.67
HLA-DPA1-241ENST00000417724 V9GYV3 84 aa4.59□□□□□ -1.67
HLA-DPA1-241ENST00000417724 IGLV7-46A0A075B6I9 117 aa4.58□□□□□ -1.68
HLA-DPA1-241ENST00000417724 A0A1B0GW15 77 aa4.58□□□□□ -1.68
HLA-DPA1-241ENST00000417724 RAB5AP20339 215 aa4.58□□□□□ -1.68
HLA-DPA1-241ENST00000417724 C6orf226Q5I0X4 101 aa4.58□□□□□ -1.68
HLA-DPA1-241ENST00000417724 MRPL55Q7Z7F7 128 aaKnown RBP4.58□□□□□ -1.68
HLA-DPA1-241ENST00000417724 LINC00469Q8N7U9 141 aa4.58□□□□□ -1.68
HLA-DPA1-241ENST00000417724 LINC00304Q8N9R0 145 aa4.58□□□□□ -1.68
HLA-DPA1-241ENST00000417724 EIF5A2Q9GZV4 153 aaKnown RBP4.58□□□□□ -1.68
HLA-DPA1-241ENST00000417724 XAGE1AQ9HD64 81 aa4.58□□□□□ -1.68
HLA-DPA1-241ENST00000417724 TP73-AS1Q9UF72 201 aa4.58□□□□□ -1.68
HLA-DPA1-241ENST00000417724 PYGO1Q9Y3Y4 419 aa4.58□□□□□ -1.68
HLA-DPA1-241ENST00000417724 PPBPP02775 128 aa4.57□□□□□ -1.68
HLA-DPA1-241ENST00000417724 CTAG1AP78358 180 aa4.57□□□□□ -1.68
HLA-DPA1-241ENST00000417724 FAM74A3Q4VXF1 159 aa4.57□□□□□ -1.68
HLA-DPA1-241ENST00000417724 Q6ZN92 141 aa4.57□□□□□ -1.68
HLA-DPA1-241ENST00000417724 LINC00173Q6ZV60 143 aa4.57□□□□□ -1.68
HLA-DPA1-241ENST00000417724 TMEM141Q96I45 108 aa4.57□□□□□ -1.68
HLA-DPA1-241ENST00000417724 ANAPC11Q9NYG5 84 aa4.57□□□□□ -1.68
HLA-DPA1-241ENST00000417724 TOMM7Q9P0U1 55 aa4.57□□□□□ -1.68
HLA-DPA1-241ENST00000417724 IGLV4-3A0A075B6K6 122 aa4.56□□□□□ -1.68
HLA-DPA1-241ENST00000417724 D6R8Y8 96 aa4.56□□□□□ -1.68
HLA-DPA1-241ENST00000417724 F8W036 122 aa4.56□□□□□ -1.68
HLA-DPA1-241ENST00000417724 S100A8P05109 93 aa4.56□□□□□ -1.68
HLA-DPA1-241ENST00000417724 FAM229BQ4G0N7 80 aa4.56□□□□□ -1.68
HLA-DPA1-241ENST00000417724 KRTAP13-2Q52LG2 175 aa4.56□□□□□ -1.68
HLA-DPA1-241ENST00000417724 TEX43Q6ZNM6 134 aa4.56□□□□□ -1.68
HLA-DPA1-241ENST00000417724 C2orf88Q9BSF0 95 aa4.56□□□□□ -1.68
HLA-DPA1-241ENST00000417724 ALKBH7Q9BT30 221 aaPredicted RBP4.56□□□□□ -1.68
HLA-DPA1-241ENST00000417724 IGKV2D-26A0A0A0MRZ7 120 aa4.55□□□□□ -1.68
HLA-DPA1-241ENST00000417724 SMIM27A0A1W2PRY6 76 aa4.55□□□□□ -1.68
HLA-DPA1-241ENST00000417724 RPL37AP8A6NKH3 93 aa4.55□□□□□ -1.68
HLA-DPA1-241ENST00000417724 NPYP01303 97 aa4.55□□□□□ -1.68
HLA-DPA1-241ENST00000417724 Q8IZM0 81 aa4.55□□□□□ -1.68
HLA-DPA1-241ENST00000417724 LINC00167Q96N53 147 aa4.55□□□□□ -1.68
HLA-DPA1-241ENST00000417724 F8VRH5 84 aa4.54□□□□□ -1.68
HLA-DPA1-241ENST00000417724 SRP19P09132 144 aaKnown RBP4.54□□□□□ -1.68
HLA-DPA1-241ENST00000417724 UBE2AP49459 152 aa4.54□□□□□ -1.68
HLA-DPA1-241ENST00000417724 LINC01547P58512 204 aaPredicted RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms