RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 UBE2D1P51668 147 aa14.99□□□□□ -0.01
SMARCB1-205ENST00000417137 URB1-AS1Q96HZ7 61 aa14.99□□□□□ -0.01
SMARCB1-205ENST00000417137 IGHV3OR16-9A0A0B4J2B5 98 aa14.98□□□□□ -0.01
SMARCB1-205ENST00000417137 SEC11AP67812 179 aa14.98□□□□□ -0.01
SMARCB1-205ENST00000417137 LINC01620Q4KN68 170 aa14.98□□□□□ -0.01
SMARCB1-205ENST00000417137 LINC00242Q5T6M2 205 aa14.98□□□□□ -0.01
SMARCB1-205ENST00000417137 LINC00173Q6ZV60 143 aa14.98□□□□□ -0.01
SMARCB1-205ENST00000417137 CHCHD1Q96BP2 118 aaKnown RBP14.98□□□□□ -0.01
SMARCB1-205ENST00000417137 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.97□□□□□ -0.01
SMARCB1-205ENST00000417137 HBDP02042 147 aa14.97□□□□□ -0.01
SMARCB1-205ENST00000417137 ZC2HC1BQ5TFG8 222 aa14.97□□□□□ -0.01
SMARCB1-205ENST00000417137 DNAH5Q8TE73 4624 aa14.96□□□□□ -0.01
SMARCB1-205ENST00000417137 SCO1O75880 301 aa14.96□□□□□ -0.01
SMARCB1-205ENST00000417137 BAGE3Q86Y29 109 aa14.96□□□□□ -0.01
SMARCB1-205ENST00000417137 SLPIP03973 132 aa14.95□□□□□ -0.02
SMARCB1-205ENST00000417137 LRP1BQ9NZR2 4599 aa14.95□□□□□ -0.02
SMARCB1-205ENST00000417137 IGHV3-64A0A075B6Q5 118 aa14.94□□□□□ -0.02
SMARCB1-205ENST00000417137 FAM19A3Q7Z5A8 133 aa14.94□□□□□ -0.02
SMARCB1-205ENST00000417137 A0A087WZ39 114 aa14.93□□□□□ -0.02
SMARCB1-205ENST00000417137 COX6A2Q02221 97 aa14.93□□□□□ -0.02
SMARCB1-205ENST00000417137 OR10D4PQ8NGN7 298 aa14.93□□□□□ -0.02
SMARCB1-205ENST00000417137 A0A096LNJ9 63 aa14.92□□□□□ -0.02
SMARCB1-205ENST00000417137 S100A1P23297 94 aa14.92□□□□□ -0.02
SMARCB1-205ENST00000417137 XGP55808 180 aa14.92□□□□□ -0.02
SMARCB1-205ENST00000417137 HERVK_113P63121 156 aa14.92□□□□□ -0.02
SMARCB1-205ENST00000417137 PMVKQ15126 192 aa14.92□□□□□ -0.02
SMARCB1-205ENST00000417137 PMCHL1Q16048 86 aa14.92□□□□□ -0.02
SMARCB1-205ENST00000417137 GEMIN7Q9H840 131 aaKnown RBP14.92□□□□□ -0.02
SMARCB1-205ENST00000417137 FAM30AQ9NZY2 134 aa14.92□□□□□ -0.02
SMARCB1-205ENST00000417137 ABCA13Q86UQ4 5058 aa14.92□□□□□ -0.02
SMARCB1-205ENST00000417137 ATP5LO75964 103 aa14.91□□□□□ -0.02
SMARCB1-205ENST00000417137 Q6ZSA8 131 aa14.91□□□□□ -0.02
SMARCB1-205ENST00000417137 LINC01561Q8N1V8 128 aa14.91□□□□□ -0.02
SMARCB1-205ENST00000417137 CST9LQ9H4G1 147 aa14.91□□□□□ -0.02
SMARCB1-205ENST00000417137 IGLV4-69A0A075B6H9 119 aa14.9□□□□□ -0.02
SMARCB1-205ENST00000417137 PDZD11Q5EBL8 140 aa14.9□□□□□ -0.02
SMARCB1-205ENST00000417137 SDIM1Q6ZPB5 146 aa14.9□□□□□ -0.02
SMARCB1-205ENST00000417137 ORAOV1Q8WV07 137 aa14.9□□□□□ -0.02
SMARCB1-205ENST00000417137 LINC00526Q96FQ7 95 aa14.9□□□□□ -0.02
SMARCB1-205ENST00000417137 HSBP1O75506 76 aa14.89□□□□□ -0.03
SMARCB1-205ENST00000417137 SPAG11BQ08648 103 aa14.89□□□□□ -0.03
SMARCB1-205ENST00000417137 SYCNQ0VAF6 134 aa14.89□□□□□ -0.03
SMARCB1-205ENST00000417137 C2orf48Q96LS8 159 aa14.89□□□□□ -0.03
SMARCB1-205ENST00000417137 PKIGQ9Y2B9 76 aa14.89□□□□□ -0.03
SMARCB1-205ENST00000417137 F8WDY8 70 aa14.88□□□□□ -0.03
SMARCB1-205ENST00000417137 CARD19Q96LW7 228 aa14.88□□□□□ -0.03
SMARCB1-205ENST00000417137 A0A0J9YXV3 536 aa14.87□□□□□ -0.03
SMARCB1-205ENST00000417137 TINCRA0A1B0GVN0 87 aa14.87□□□□□ -0.03
SMARCB1-205ENST00000417137 NDUFA6P56556 154 aa14.87□□□□□ -0.03
SMARCB1-205ENST00000417137 CAMK2N2Q96S95 79 aa14.87□□□□□ -0.03
SMARCB1-205ENST00000417137 CHAC1Q9BUX1 264 aa14.85□□□□□ -0.03
SMARCB1-205ENST00000417137 PACRGQ96M98 296 aaPredicted RBP14.84□□□□□ -0.03
SMARCB1-205ENST00000417137 LINC00469Q8N7U9 141 aa14.83□□□□□ -0.04
SMARCB1-205ENST00000417137 KRTAP4-5Q9BYR2 181 aa14.83□□□□□ -0.04
SMARCB1-205ENST00000417137 CDKN2A-AS1Q9UH64 79 aa14.83□□□□□ -0.04
SMARCB1-205ENST00000417137 SERF1AO75920 110 aa14.82□□□□□ -0.04
SMARCB1-205ENST00000417137 HAMPP81172 84 aa14.82□□□□□ -0.04
SMARCB1-205ENST00000417137 DPH3Q96FX2 82 aa14.82□□□□□ -0.04
SMARCB1-205ENST00000417137 NDUFA1O15239 70 aa14.81□□□□□ -0.04
SMARCB1-205ENST00000417137 ATP6V1G1O75348 118 aa14.81□□□□□ -0.04
SMARCB1-205ENST00000417137 PRSS2P07478 247 aa14.81□□□□□ -0.04
SMARCB1-205ENST00000417137 Q6ZRU5 148 aa14.81□□□□□ -0.04
SMARCB1-205ENST00000417137 Q8N1X5 172 aa14.81□□□□□ -0.04
SMARCB1-205ENST00000417137 FAM19A2Q8N3H0 131 aa14.81□□□□□ -0.04
SMARCB1-205ENST00000417137 IFI27L1Q96BM0 104 aa14.8□□□□□ -0.04
SMARCB1-205ENST00000417137 IGLV5-45A0A087WSX0 123 aa14.79□□□□□ -0.04
SMARCB1-205ENST00000417137 RNF151Q2KHN1 245 aa14.79□□□□□ -0.04
SMARCB1-205ENST00000417137 SCXQ7RTU7 201 aa14.79□□□□□ -0.04
SMARCB1-205ENST00000417137 H3BRM9 83 aa14.78□□□□□ -0.04
SMARCB1-205ENST00000417137 IGLC3P0DOY3 106 aa14.78□□□□□ -0.04
SMARCB1-205ENST00000417137 KIAA0087Q14695 138 aa14.78□□□□□ -0.04
SMARCB1-205ENST00000417137 CIRBP-AS1Q8TBR5 109 aa14.78□□□□□ -0.04
SMARCB1-205ENST00000417137 MRPL35Q9NZE8 188 aaKnown RBP14.78□□□□□ -0.04
SMARCB1-205ENST00000417137 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.78□□□□□ -0.04
SMARCB1-205ENST00000417137 APOBP04114 4563 aaKnown RBP14.77□□□□□ -0.04
SMARCB1-205ENST00000417137 CIRBPQ14011 172 aaKnown RBP14.77□□□□□ -0.05
SMARCB1-205ENST00000417137 C6orf226Q5I0X4 101 aa14.77□□□□□ -0.05
SMARCB1-205ENST00000417137 TOMM7Q9P0U1 55 aa14.77□□□□□ -0.05
SMARCB1-205ENST00000417137 LINC00474Q9P2X8 69 aa14.77□□□□□ -0.05
SMARCB1-205ENST00000417137 LOC107984640A0A0U1RRK4 108 aa14.76□□□□□ -0.05
SMARCB1-205ENST00000417137 HIST1H2BKO60814 126 aa14.76□□□□□ -0.05
SMARCB1-205ENST00000417137 LEPROTL1O95214 131 aa14.76□□□□□ -0.05
SMARCB1-205ENST00000417137 SMR3BP02814 79 aaPredicted RBP14.76□□□□□ -0.05
SMARCB1-205ENST00000417137 HIST1H2BJP06899 126 aa14.76□□□□□ -0.05
SMARCB1-205ENST00000417137 HIST1H2BOP23527 126 aa14.76□□□□□ -0.05
SMARCB1-205ENST00000417137 HIST1H2BBP33778 126 aa14.76□□□□□ -0.05
SMARCB1-205ENST00000417137 HIST1H2BDP58876 126 aa14.76□□□□□ -0.05
SMARCB1-205ENST00000417137 LINC00310P59036 64 aa14.76□□□□□ -0.05
SMARCB1-205ENST00000417137 HIST1H2BCP62807 126 aa14.76□□□□□ -0.05
SMARCB1-205ENST00000417137 HIST2H2BEQ16778 126 aa14.76□□□□□ -0.05
SMARCB1-205ENST00000417137 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.76□□□□□ -0.05
SMARCB1-205ENST00000417137 Q8IZM0 81 aa14.76□□□□□ -0.05
SMARCB1-205ENST00000417137 HIST1H2BHQ93079 126 aa14.76□□□□□ -0.05
SMARCB1-205ENST00000417137 HIST1H2BNQ99877 126 aa14.76□□□□□ -0.05
SMARCB1-205ENST00000417137 HIST1H2BMQ99879 126 aa14.76□□□□□ -0.05
SMARCB1-205ENST00000417137 TRAV12-1A0A0B4J245 112 aa14.75□□□□□ -0.05
SMARCB1-205ENST00000417137 CKS1BP61024 79 aa14.75□□□□□ -0.05
SMARCB1-205ENST00000417137 CHTOPQ9Y3Y2 248 aaKnown RBP14.75□□□□□ -0.05
SMARCB1-205ENST00000417137 FAM229AH3BQW9 127 aa14.74□□□□□ -0.05
SMARCB1-205ENST00000417137 UNQ6190/PRO20217Q6UXQ8 127 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms