RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 LINC00242Q5T6M2 205 aa8.75□□□□□ -1.01
UBR4-205ENST00000417040 Q8N814 137 aa8.74□□□□□ -1.01
UBR4-205ENST00000417040 RETNLBQ9BQ08 111 aa8.74□□□□□ -1.01
UBR4-205ENST00000417040 SERP1Q9Y6X1 66 aa8.74□□□□□ -1.01
UBR4-205ENST00000417040 HILS1P60008 231 aa8.74□□□□□ -1.01
UBR4-205ENST00000417040 SMIM26A0A096LP01 95 aa8.74□□□□□ -1.01
UBR4-205ENST00000417040 CHCHD7Q9BUK0 85 aa8.74□□□□□ -1.01
UBR4-205ENST00000417040 LTBP2Q14767 1821 aa8.73□□□□□ -1.01
UBR4-205ENST00000417040 UBE2D3P61077 147 aa8.73□□□□□ -1.01
UBR4-205ENST00000417040 UBE2D2P62837 147 aa8.73□□□□□ -1.01
UBR4-205ENST00000417040 NTM-AS1Q6ZSK4 140 aa8.73□□□□□ -1.01
UBR4-205ENST00000417040 CYSRT1A8MQ03 144 aa8.73□□□□□ -1.01
UBR4-205ENST00000417040 INAFM1C9JVW0 142 aa8.73□□□□□ -1.01
UBR4-205ENST00000417040 UNQ6190/PRO20217Q6UXQ8 127 aa8.73□□□□□ -1.01
UBR4-205ENST00000417040 ARHGAP32A7KAX9 2087 aa8.72□□□□□ -1.01
UBR4-205ENST00000417040 TRAV7A0A075B6U4 112 aa8.72□□□□□ -1.01
UBR4-205ENST00000417040 PMAIP1Q13794 54 aa8.72□□□□□ -1.01
UBR4-205ENST00000417040 DEFB116Q30KQ4 102 aa8.72□□□□□ -1.01
UBR4-205ENST00000417040 SMIM1B2RUZ4 78 aa8.72□□□□□ -1.01
UBR4-205ENST00000417040 CNFNQ9BYD5 112 aa8.72□□□□□ -1.01
UBR4-205ENST00000417040 C14orf177Q52M58 125 aa8.72□□□□□ -1.01
UBR4-205ENST00000417040 IGLV4-60A0A075B6I1 120 aa8.71□□□□□ -1.01
UBR4-205ENST00000417040 DHRS4-AS1Q9P1J3 65 aa8.71□□□□□ -1.01
UBR4-205ENST00000417040 CSDC2Q9Y534 153 aaKnown RBP8.71□□□□□ -1.01
UBR4-205ENST00000417040 A8MTW9 85 aa8.71□□□□□ -1.02
UBR4-205ENST00000417040 Q6ZSN1 163 aa8.71□□□□□ -1.02
UBR4-205ENST00000417040 KPRPQ5T749 579 aaPredicted RBP8.71□□□□□ -1.02
UBR4-205ENST00000417040 Q8N9L7 120 aa8.7□□□□□ -1.02
UBR4-205ENST00000417040 PLXNB1O43157 2135 aa8.7□□□□□ -1.02
UBR4-205ENST00000417040 TNCP24821 2201 aa8.7□□□□□ -1.02
UBR4-205ENST00000417040 TRBV10-3A0A0K0K1G6 114 aa8.7□□□□□ -1.02
UBR4-205ENST00000417040 PRYO14603 147 aa8.7□□□□□ -1.02
UBR4-205ENST00000417040 C6orf223Q8N319 242 aa8.7□□□□□ -1.02
UBR4-205ENST00000417040 LINC00208Q96KT6 92 aa8.7□□□□□ -1.02
UBR4-205ENST00000417040 RETNQ9HD89 108 aa8.7□□□□□ -1.02
UBR4-205ENST00000417040 COX17Q14061 63 aa8.69□□□□□ -1.02
UBR4-205ENST00000417040 CDSNQ15517 529 aa8.69□□□□□ -1.02
UBR4-205ENST00000417040 BEAN1Q3B7T3 259 aa8.69□□□□□ -1.02
UBR4-205ENST00000417040 CDIP1Q9H305 208 aa8.69□□□□□ -1.02
UBR4-205ENST00000417040 Q8IZM0 81 aa8.69□□□□□ -1.02
UBR4-205ENST00000417040 PSMG3-AS1Q96PY0 264 aa8.69□□□□□ -1.02
UBR4-205ENST00000417040 K7ERS5 55 aa8.69□□□□□ -1.02
UBR4-205ENST00000417040 PLAC8L1A1L4L8 177 aa8.68□□□□□ -1.02
UBR4-205ENST00000417040 IGLV1-40P01703 118 aa8.68□□□□□ -1.02
UBR4-205ENST00000417040 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.68□□□□□ -1.02
UBR4-205ENST00000417040 ESRGQ1W209 222 aa8.68□□□□□ -1.02
UBR4-205ENST00000417040 PCOTHQ58A44 107 aa8.68□□□□□ -1.02
UBR4-205ENST00000417040 CEP192Q8TEP8 1941 aa8.68□□□□□ -1.02
UBR4-205ENST00000417040 RPL28P46779 137 aaKnown RBP8.67□□□□□ -1.02
UBR4-205ENST00000417040 RAI1Q7Z5J4 1906 aaPredicted RBP8.67□□□□□ -1.02
UBR4-205ENST00000417040 COL4A4P53420 1690 aaPredicted RBP8.67□□□□□ -1.02
UBR4-205ENST00000417040 LELP1Q5T871 98 aa8.67□□□□□ -1.02
UBR4-205ENST00000417040 Q8N3U1 123 aa8.67□□□□□ -1.02
UBR4-205ENST00000417040 CACNA1HO95180 2353 aa8.67□□□□□ -1.02
UBR4-205ENST00000417040 MUC22E2RYF6 1773 aaPredicted RBP8.66□□□□□ -1.02
UBR4-205ENST00000417040 PLA2G2AP14555 144 aa8.66□□□□□ -1.02
UBR4-205ENST00000417040 Q9UF83 564 aa8.66□□□□□ -1.02
UBR4-205ENST00000417040 LINC00846Q9NV44 126 aa8.66□□□□□ -1.02
UBR4-205ENST00000417040 PTPRSQ13332 1948 aa8.66□□□□□ -1.02
UBR4-205ENST00000417040 PRORYQ9H606 182 aa8.66□□□□□ -1.02
UBR4-205ENST00000417040 NBASA2RRP1 2371 aa8.65□□□□□ -1.02
UBR4-205ENST00000417040 LINC00575Q6W349 94 aa8.65□□□□□ -1.02
UBR4-205ENST00000417040 LINC01547P58512 204 aaPredicted RBP8.65□□□□□ -1.03
UBR4-205ENST00000417040 AVPP01185 164 aa8.64□□□□□ -1.03
UBR4-205ENST00000417040 C1orf137Q5JT78 98 aa8.64□□□□□ -1.03
UBR4-205ENST00000417040 FSTL3O95633 263 aa8.64□□□□□ -1.03
UBR4-205ENST00000417040 CPAMD8Q8IZJ3 1885 aa8.64□□□□□ -1.03
UBR4-205ENST00000417040 KIR2DL5BQ8NHK3 375 aa8.63□□□□□ -1.03
UBR4-205ENST00000417040 COL5A1P20908 1838 aaPredicted RBP8.63□□□□□ -1.03
UBR4-205ENST00000417040 C10orf25Q5T742 122 aa8.63□□□□□ -1.03
UBR4-205ENST00000417040 LINC01006Q8NI28 216 aa8.63□□□□□ -1.03
UBR4-205ENST00000417040 IGHV6-1A0A0B4J1U7 121 aa8.62□□□□□ -1.03
UBR4-205ENST00000417040 TRBV7-7A0A0K0K1E9 115 aa8.62□□□□□ -1.03
UBR4-205ENST00000417040 C4orf26Q17RF5 130 aa8.62□□□□□ -1.03
UBR4-205ENST00000417040 AMELXQ99217 191 aa8.62□□□□□ -1.03
UBR4-205ENST00000417040 TRBV7-6A0A0J9YX20 115 aa8.61□□□□□ -1.03
UBR4-205ENST00000417040 PRR14LQ5THK1 2151 aa8.61□□□□□ -1.03
UBR4-205ENST00000417040 CRYGAP11844 174 aa8.61□□□□□ -1.03
UBR4-205ENST00000417040 SHISA2Q6UWI4 295 aa8.61□□□□□ -1.03
UBR4-205ENST00000417040 MRGPRG-AS1Q2M3A8 158 aa8.6□□□□□ -1.03
UBR4-205ENST00000417040 LY6G6DO95868 133 aa8.6□□□□□ -1.03
UBR4-205ENST00000417040 TRAV10A0A0B4J240 114 aa8.6□□□□□ -1.03
UBR4-205ENST00000417040 SMCPP49901 116 aaPredicted RBP8.6□□□□□ -1.03
UBR4-205ENST00000417040 ODF3L2Q3SX64 289 aa8.6□□□□□ -1.03
UBR4-205ENST00000417040 Q6ZVQ6 151 aa8.59□□□□□ -1.03
UBR4-205ENST00000417040 REG3GQ6UW15 175 aa8.59□□□□□ -1.03
UBR4-205ENST00000417040 CIRBP-AS1Q8TBR5 109 aa8.59□□□□□ -1.03
UBR4-205ENST00000417040 FHL2Q14192 279 aa8.59□□□□□ -1.04
UBR4-205ENST00000417040 SPINK1P00995 79 aa8.58□□□□□ -1.04
UBR4-205ENST00000417040 LRP4O75096 1905 aa8.58□□□□□ -1.04
UBR4-205ENST00000417040 DSCAMO60469 2012 aa8.58□□□□□ -1.04
UBR4-205ENST00000417040 H0Y9P7 68 aa8.58□□□□□ -1.04
UBR4-205ENST00000417040 SMR3AQ99954 134 aa8.58□□□□□ -1.04
UBR4-205ENST00000417040 LINC00337Q8N6G1 96 aa8.57□□□□□ -1.04
UBR4-205ENST00000417040 OXLD1Q5BKU9 147 aa8.57□□□□□ -1.04
UBR4-205ENST00000417040 C7orf33Q8WU49 177 aa8.57□□□□□ -1.04
UBR4-205ENST00000417040 BRI3O95415 125 aa8.56□□□□□ -1.04
UBR4-205ENST00000417040 RIF1Q5UIP0 2472 aaKnown RBP8.56□□□□□ -1.04
UBR4-205ENST00000417040 TMEM254Q8TBM7 123 aa8.56□□□□□ -1.04
UBR4-205ENST00000417040 ZNF706Q9Y5V0 76 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms