RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 GAGE2EQ4V326 116 aa6.03□□□□□ -1.44
MDC1-202ENST00000416571 AMN1Q8IY45 258 aa6.03□□□□□ -1.44
MDC1-202ENST00000416571 GAGE2DQ9UEU5 116 aa6.03□□□□□ -1.44
MDC1-202ENST00000416571 SMKR1H3BMG3 65 aa6.02□□□□□ -1.45
MDC1-202ENST00000416571 M0QXV9 152 aa6.02□□□□□ -1.45
MDC1-202ENST00000416571 PPP1R2P9O14990 202 aa6.02□□□□□ -1.45
MDC1-202ENST00000416571 KRTAP1-4P0C5Y4 121 aa6.02□□□□□ -1.45
MDC1-202ENST00000416571 CEBPGP53567 150 aa6.02□□□□□ -1.45
MDC1-202ENST00000416571 KRTAP11-1Q8IUC1 163 aa6.02□□□□□ -1.45
MDC1-202ENST00000416571 TIMM21Q9BVV7 248 aa6.02□□□□□ -1.45
MDC1-202ENST00000416571 TMEM250H0YL14 139 aa6.01□□□□□ -1.45
MDC1-202ENST00000416571 TLX1NBP0CAT3 122 aa6.01□□□□□ -1.45
MDC1-202ENST00000416571 RIGQ13278 110 aa6.01□□□□□ -1.45
MDC1-202ENST00000416571 SMCPP49901 116 aaPredicted RBP6□□□□□ -1.45
MDC1-202ENST00000416571 C10orf25Q5T742 122 aa6□□□□□ -1.45
MDC1-202ENST00000416571 UNQ6190/PRO20217Q6UXQ8 127 aa6□□□□□ -1.45
MDC1-202ENST00000416571 SMDT1Q9H4I9 107 aa6□□□□□ -1.45
MDC1-202ENST00000416571 C6orf48Q9UBA6 75 aa6□□□□□ -1.45
MDC1-202ENST00000416571 CARHSP1Q9Y2V2 147 aaKnown RBP6□□□□□ -1.45
MDC1-202ENST00000416571 TGIF2-C20orf24A0A0A6YYL0 155 aa5.99□□□□□ -1.45
MDC1-202ENST00000416571 IGHV3OR16-9A0A0B4J2B5 98 aa5.99□□□□□ -1.45
MDC1-202ENST00000416571 IFITM10A6NMD0 228 aa5.99□□□□□ -1.45
MDC1-202ENST00000416571 TCAPO15273 167 aa5.99□□□□□ -1.45
MDC1-202ENST00000416571 TSPAN13O95857 204 aa5.99□□□□□ -1.45
MDC1-202ENST00000416571 SLC51BQ86UW2 128 aa5.99□□□□□ -1.45
MDC1-202ENST00000416571 NRACQ8N912 160 aa5.99□□□□□ -1.45
MDC1-202ENST00000416571 RPL39P62891 51 aaKnown RBP5.98□□□□□ -1.45
MDC1-202ENST00000416571 HBBP68871 147 aa5.98□□□□□ -1.45
MDC1-202ENST00000416571 PACRGQ96M98 296 aaPredicted RBP5.98□□□□□ -1.45
MDC1-202ENST00000416571 SMIM7Q9BQ49 75 aa5.98□□□□□ -1.45
MDC1-202ENST00000416571 SPANXA1Q9NS26 97 aa5.98□□□□□ -1.45
MDC1-202ENST00000416571 TRBV30A0A0K0K1B3 111 aa5.97□□□□□ -1.45
MDC1-202ENST00000416571 ZNF861PO60384 105 aa5.97□□□□□ -1.45
MDC1-202ENST00000416571 LINC01551Q86U37 167 aa5.97□□□□□ -1.45
MDC1-202ENST00000416571 C20orf78Q9BR46 151 aa5.97□□□□□ -1.45
MDC1-202ENST00000416571 OSTCQ9NRP0 149 aa5.97□□□□□ -1.45
MDC1-202ENST00000416571 hCG_2014768A0A024R1R8 64 aa5.96□□□□□ -1.46
MDC1-202ENST00000416571 LINC00862A6NCI5 91 aa5.96□□□□□ -1.46
MDC1-202ENST00000416571 NDUFC2-KCTD14E9PQ53 114 aa5.96□□□□□ -1.46
MDC1-202ENST00000416571 CKS2P33552 79 aa5.96□□□□□ -1.46
MDC1-202ENST00000416571 BLOC1S1P78537 153 aa5.96□□□□□ -1.46
MDC1-202ENST00000416571 MRPS36P82909 103 aaKnown RBP5.96□□□□□ -1.46
MDC1-202ENST00000416571 MRPL51Q4U2R6 128 aaKnown RBP5.96□□□□□ -1.46
MDC1-202ENST00000416571 KRTAP7-1Q8IUC3 87 aa5.96□□□□□ -1.46
MDC1-202ENST00000416571 ZNF727A8MUV8 499 aa5.95□□□□□ -1.46
MDC1-202ENST00000416571 NUPR1O60356 82 aa5.95□□□□□ -1.46
MDC1-202ENST00000416571 IFI27P40305 119 aaPredicted RBP5.95□□□□□ -1.46
MDC1-202ENST00000416571 RPL32P62910 135 aaKnown RBP5.95□□□□□ -1.46
MDC1-202ENST00000416571 FAM104BQ5XKR9 115 aa5.95□□□□□ -1.46
MDC1-202ENST00000416571 EIF5A2Q9GZV4 153 aaKnown RBP5.95□□□□□ -1.46
MDC1-202ENST00000416571 NAT8BQ9UHF3 227 aa5.95□□□□□ -1.46
MDC1-202ENST00000416571 TRBV24-1A0A075B6N3 115 aa5.94□□□□□ -1.46
MDC1-202ENST00000416571 TNFRSF6BO95407 300 aa5.94□□□□□ -1.46
MDC1-202ENST00000416571 C9orf129Q5T035 196 aaKnown RBP5.94□□□□□ -1.46
MDC1-202ENST00000416571 C2orf82Q6UX34 121 aa5.94□□□□□ -1.46
MDC1-202ENST00000416571 SMIM2Q9BVW6 85 aa5.94□□□□□ -1.46
MDC1-202ENST00000416571 V9GYV3 84 aa5.94□□□□□ -1.46
MDC1-202ENST00000416571 KIAA0087Q14695 138 aa5.93□□□□□ -1.46
MDC1-202ENST00000416571 LBHQ53QV2 105 aaPredicted RBP5.93□□□□□ -1.46
MDC1-202ENST00000416571 ALKAL2Q6UX46 152 aa5.93□□□□□ -1.46
MDC1-202ENST00000416571 TYMSOSQ8TAI1 123 aa5.93□□□□□ -1.46
MDC1-202ENST00000416571 FAM104AQ969W3 186 aa5.93□□□□□ -1.46
MDC1-202ENST00000416571 CTDSP1Q9GZU7 261 aa5.93□□□□□ -1.46
MDC1-202ENST00000416571 A0A1B0GW15 77 aa5.92□□□□□ -1.46
MDC1-202ENST00000416571 PRSS2P07478 247 aa5.92□□□□□ -1.46
MDC1-202ENST00000416571 CRYGAP11844 174 aa5.92□□□□□ -1.46
MDC1-202ENST00000416571 RAB5AP20339 215 aa5.92□□□□□ -1.46
MDC1-202ENST00000416571 RPL28P46779 137 aaKnown RBP5.92□□□□□ -1.46
MDC1-202ENST00000416571 CKS1BP61024 79 aa5.92□□□□□ -1.46
MDC1-202ENST00000416571 C22orf24Q9Y442 160 aa5.92□□□□□ -1.46
MDC1-202ENST00000416571 A0A087X002 238 aa5.91□□□□□ -1.46
MDC1-202ENST00000416571 D6R8Y8 96 aa5.91□□□□□ -1.46
MDC1-202ENST00000416571 FAM74A3Q4VXF1 159 aa5.91□□□□□ -1.46
MDC1-202ENST00000416571 LINC00242Q5T6M2 205 aa5.91□□□□□ -1.46
MDC1-202ENST00000416571 TCTE3Q8IZS6 198 aa5.91□□□□□ -1.46
MDC1-202ENST00000416571 LINC00469Q8N7U9 141 aa5.91□□□□□ -1.46
MDC1-202ENST00000416571 C2orf88Q9BSF0 95 aa5.91□□□□□ -1.46
MDC1-202ENST00000416571 TOMM7Q9P0U1 55 aa5.91□□□□□ -1.46
MDC1-202ENST00000416571 F8W036 122 aa5.9□□□□□ -1.46
MDC1-202ENST00000416571 NPYP01303 97 aa5.9□□□□□ -1.46
MDC1-202ENST00000416571 S100A8P05109 93 aa5.9□□□□□ -1.46
MDC1-202ENST00000416571 SRP19P09132 144 aaKnown RBP5.9□□□□□ -1.46
MDC1-202ENST00000416571 C6orf226Q5I0X4 101 aa5.9□□□□□ -1.46
MDC1-202ENST00000416571 TEX43Q6ZNM6 134 aa5.9□□□□□ -1.46
MDC1-202ENST00000416571 TMEM141Q96I45 108 aa5.9□□□□□ -1.46
MDC1-202ENST00000416571 CDIP1Q9H305 208 aa5.9□□□□□ -1.46
MDC1-202ENST00000416571 XAGE1AQ9HD64 81 aa5.9□□□□□ -1.46
MDC1-202ENST00000416571 IGLV4-3A0A075B6K6 122 aa5.89□□□□□ -1.47
MDC1-202ENST00000416571 PPBPP02775 128 aa5.89□□□□□ -1.47
MDC1-202ENST00000416571 ADIRFQ15847 76 aa5.89□□□□□ -1.47
MDC1-202ENST00000416571 Q6ZN92 141 aa5.89□□□□□ -1.47
MDC1-202ENST00000416571 MRPL55Q7Z7F7 128 aaKnown RBP5.89□□□□□ -1.47
MDC1-202ENST00000416571 LINC01561Q8N1V8 128 aa5.89□□□□□ -1.47
MDC1-202ENST00000416571 PYGO1Q9Y3Y4 419 aa5.89□□□□□ -1.47
MDC1-202ENST00000416571 SMIM27A0A1W2PRY6 76 aa5.88□□□□□ -1.47
MDC1-202ENST00000416571 BCE1O60756 84 aa5.88□□□□□ -1.47
MDC1-202ENST00000416571 RPL23P62829 140 aaKnown RBP5.88□□□□□ -1.47
MDC1-202ENST00000416571 MRPL54Q6P161 138 aaKnown RBP5.88□□□□□ -1.47
MDC1-202ENST00000416571 RETNLBQ9BQ08 111 aa5.88□□□□□ -1.47
MDC1-202ENST00000416571 TP73-AS1Q9UF72 201 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms