RNA–Protein interactions for RNA: ENST00000416248.5

HDAC11-208, Transcript of histone deacetylase 11, humanhuman

TSL 4

Gene HDAC11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-208ENST00000416248 NDUFA1O15239 70 aa11.37□□□□□ -0.59
HDAC11-208ENST00000416248 SRSF3P84103 164 aaKnown RBP11.37□□□□□ -0.59
HDAC11-208ENST00000416248 C10orf25Q5T742 122 aa11.37□□□□□ -0.59
HDAC11-208ENST00000416248 KRTAP7-1Q8IUC3 87 aa11.37□□□□□ -0.59
HDAC11-208ENST00000416248 CARHSP1Q9Y2V2 147 aaKnown RBP11.37□□□□□ -0.59
HDAC11-208ENST00000416248 CT83Q5H943 113 aa11.36□□□□□ -0.59
HDAC11-208ENST00000416248 AMN1Q8IY45 258 aa11.36□□□□□ -0.59
HDAC11-208ENST00000416248 A0A1B0GUT8 65 aa11.35□□□□□ -0.59
HDAC11-208ENST00000416248 M0QXV9 152 aa11.35□□□□□ -0.59
HDAC11-208ENST00000416248 UBE2BP63146 152 aa11.35□□□□□ -0.59
HDAC11-208ENST00000416248 TMEM241Q24JQ0 296 aa11.35□□□□□ -0.59
HDAC11-208ENST00000416248 TIMM21Q9BVV7 248 aa11.35□□□□□ -0.59
HDAC11-208ENST00000416248 C6orf48Q9UBA6 75 aa11.35□□□□□ -0.59
HDAC11-208ENST00000416248 SMKR1H3BMG3 65 aa11.34□□□□□ -0.59
HDAC11-208ENST00000416248 S100A1P23297 94 aa11.34□□□□□ -0.59
HDAC11-208ENST00000416248 SUMO2P61956 95 aaKnown RBP11.34□□□□□ -0.59
HDAC11-208ENST00000416248 GAGE2EQ4V326 116 aa11.34□□□□□ -0.59
HDAC11-208ENST00000416248 UNQ6190/PRO20217Q6UXQ8 127 aa11.34□□□□□ -0.59
HDAC11-208ENST00000416248 KIR2DL4Q99706 377 aa11.34□□□□□ -0.59
HDAC11-208ENST00000416248 GAGE2DQ9UEU5 116 aa11.34□□□□□ -0.59
HDAC11-208ENST00000416248 IGHV3OR16-9A0A0B4J2B5 98 aa11.33□□□□□ -0.6
HDAC11-208ENST00000416248 HIGD1CA8MV81 97 aa11.33□□□□□ -0.6
HDAC11-208ENST00000416248 C9JQL5 133 aa11.33□□□□□ -0.6
HDAC11-208ENST00000416248 NRACQ8N912 160 aa11.33□□□□□ -0.6
HDAC11-208ENST00000416248 TMEM218A2RU14 115 aa11.32□□□□□ -0.6
HDAC11-208ENST00000416248 PPP1R17O96001 155 aa11.32□□□□□ -0.6
HDAC11-208ENST00000416248 SRP19P09132 144 aaKnown RBP11.32□□□□□ -0.6
HDAC11-208ENST00000416248 TMEM18Q96B42 140 aa11.32□□□□□ -0.6
HDAC11-208ENST00000416248 TSPAN13O95857 204 aa11.31□□□□□ -0.6
HDAC11-208ENST00000416248 CEBPGP53567 150 aa11.31□□□□□ -0.6
HDAC11-208ENST00000416248 TMEM250H0YL14 139 aa11.3□□□□□ -0.6
HDAC11-208ENST00000416248 FAM104AQ969W3 186 aa11.3□□□□□ -0.6
HDAC11-208ENST00000416248 PPP1R2P9O14990 202 aa11.28□□□□□ -0.6
HDAC11-208ENST00000416248 ZNF861PO60384 105 aa11.28□□□□□ -0.6
HDAC11-208ENST00000416248 SEC11CQ9BY50 192 aa11.28□□□□□ -0.6
HDAC11-208ENST00000416248 F8W036 122 aa11.27□□□□□ -0.61
HDAC11-208ENST00000416248 ADCYAP1P18509 176 aa11.27□□□□□ -0.61
HDAC11-208ENST00000416248 RPL39P62891 51 aaKnown RBP11.27□□□□□ -0.61
HDAC11-208ENST00000416248 C10orf91Q5T1B1 145 aa11.27□□□□□ -0.61
HDAC11-208ENST00000416248 C9orf129Q5T035 196 aaKnown RBP11.26□□□□□ -0.61
HDAC11-208ENST00000416248 TRBV30A0A0K0K1B3 111 aa11.25□□□□□ -0.61
HDAC11-208ENST00000416248 NDUFC2-KCTD14E9PQ53 114 aa11.25□□□□□ -0.61
HDAC11-208ENST00000416248 RIGQ13278 110 aa11.25□□□□□ -0.61
HDAC11-208ENST00000416248 KIAA0087Q14695 138 aa11.25□□□□□ -0.61
HDAC11-208ENST00000416248 LINC01551Q86U37 167 aa11.25□□□□□ -0.61
HDAC11-208ENST00000416248 SPANXA1Q9NS26 97 aa11.25□□□□□ -0.61
HDAC11-208ENST00000416248 IFITM10A6NMD0 228 aa11.24□□□□□ -0.61
HDAC11-208ENST00000416248 HBBP68871 147 aa11.24□□□□□ -0.61
HDAC11-208ENST00000416248 MRPS36P82909 103 aaKnown RBP11.24□□□□□ -0.61
HDAC11-208ENST00000416248 C20orf78Q9BR46 151 aa11.24□□□□□ -0.61
HDAC11-208ENST00000416248 TCAPO15273 167 aa11.23□□□□□ -0.61
HDAC11-208ENST00000416248 APOC3P02656 99 aa11.23□□□□□ -0.61
HDAC11-208ENST00000416248 FAM74A3Q4VXF1 159 aa11.23□□□□□ -0.61
HDAC11-208ENST00000416248 SMIM7Q9BQ49 75 aa11.23□□□□□ -0.61
HDAC11-208ENST00000416248 A0A087X002 238 aa11.22□□□□□ -0.61
HDAC11-208ENST00000416248 TGIF2-C20orf24A0A0A6YYL0 155 aa11.22□□□□□ -0.61
HDAC11-208ENST00000416248 RPL32P62910 135 aaKnown RBP11.22□□□□□ -0.61
HDAC11-208ENST00000416248 MRPL51Q4U2R6 128 aaKnown RBP11.22□□□□□ -0.61
HDAC11-208ENST00000416248 C2orf82Q6UX34 121 aa11.22□□□□□ -0.61
HDAC11-208ENST00000416248 OSTCQ9NRP0 149 aa11.22□□□□□ -0.61
HDAC11-208ENST00000416248 TRBV24-1A0A075B6N3 115 aa11.21□□□□□ -0.61
HDAC11-208ENST00000416248 ZNF727A8MUV8 499 aa11.21□□□□□ -0.61
HDAC11-208ENST00000416248 NUPR1O60356 82 aa11.21□□□□□ -0.61
HDAC11-208ENST00000416248 FAM104BQ5XKR9 115 aa11.21□□□□□ -0.61
HDAC11-208ENST00000416248 V9GYV3 84 aa11.21□□□□□ -0.61
HDAC11-208ENST00000416248 SVBPQ8N300 66 aa11.2□□□□□ -0.62
HDAC11-208ENST00000416248 PACRGQ96M98 296 aaPredicted RBP11.2□□□□□ -0.62
HDAC11-208ENST00000416248 TYMSOSQ8TAI1 123 aa11.19□□□□□ -0.62
HDAC11-208ENST00000416248 SNAPINO95295 136 aa11.18□□□□□ -0.62
HDAC11-208ENST00000416248 CRYGAP11844 174 aa11.18□□□□□ -0.62
HDAC11-208ENST00000416248 SMIM2Q9BVW6 85 aa11.18□□□□□ -0.62
HDAC11-208ENST00000416248 CTDSP1Q9GZU7 261 aa11.18□□□□□ -0.62
HDAC11-208ENST00000416248 NAT8Q9UHE5 227 aa11.18□□□□□ -0.62
HDAC11-208ENST00000416248 CKS2P33552 79 aa11.17□□□□□ -0.62
HDAC11-208ENST00000416248 LINC00242Q5T6M2 205 aa11.17□□□□□ -0.62
HDAC11-208ENST00000416248 C22orf24Q9Y442 160 aa11.17□□□□□ -0.62
HDAC11-208ENST00000416248 TNFRSF6BO95407 300 aa11.16□□□□□ -0.62
HDAC11-208ENST00000416248 PNRC1Q12796 327 aaPredicted RBP11.16□□□□□ -0.62
HDAC11-208ENST00000416248 NAT8BQ9UHF3 227 aa11.16□□□□□ -0.62
HDAC11-208ENST00000416248 RPL28P46779 137 aaKnown RBP11.15□□□□□ -0.62
HDAC11-208ENST00000416248 LBHQ53QV2 105 aaPredicted RBP11.15□□□□□ -0.62
HDAC11-208ENST00000416248 RETNLBQ9BQ08 111 aa11.14□□□□□ -0.63
HDAC11-208ENST00000416248 IFI27P40305 119 aaPredicted RBP11.13□□□□□ -0.63
HDAC11-208ENST00000416248 RPL23P62829 140 aaKnown RBP11.13□□□□□ -0.63
HDAC11-208ENST00000416248 LINC00469Q8N7U9 141 aa11.13□□□□□ -0.63
HDAC11-208ENST00000416248 BCE1O60756 84 aa11.12□□□□□ -0.63
HDAC11-208ENST00000416248 RHEBQ15382 184 aa11.12□□□□□ -0.63
HDAC11-208ENST00000416248 ADIRFQ15847 76 aa11.12□□□□□ -0.63
HDAC11-208ENST00000416248 TPRXLQ17RH7 258 aa11.12□□□□□ -0.63
HDAC11-208ENST00000416248 LINC01561Q8N1V8 128 aa11.12□□□□□ -0.63
HDAC11-208ENST00000416248 CDIP1Q9H305 208 aa11.12□□□□□ -0.63
HDAC11-208ENST00000416248 MUC17Q685J3 4493 aa11.11□□□□□ -0.63
HDAC11-208ENST00000416248 IGLV4-3A0A075B6K6 122 aa11.11□□□□□ -0.63
HDAC11-208ENST00000416248 D6R8Y8 96 aa11.11□□□□□ -0.63
HDAC11-208ENST00000416248 NPYP01303 97 aa11.11□□□□□ -0.63
HDAC11-208ENST00000416248 XAGE1AQ9HD64 81 aa11.11□□□□□ -0.63
HDAC11-208ENST00000416248 PYGO1Q9Y3Y4 419 aa11.11□□□□□ -0.63
HDAC11-208ENST00000416248 A0A1B0GW15 77 aa11.1□□□□□ -0.63
HDAC11-208ENST00000416248 MRPL55Q7Z7F7 128 aaKnown RBP11.1□□□□□ -0.63
HDAC11-208ENST00000416248 TMEM141Q96I45 108 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms