RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 UBE2D2P62837 147 aa6.45□□□□□ -1.38
CHRNA1-206ENST00000416004 GAGE2BQ13066 116 aa6.45□□□□□ -1.38
CHRNA1-206ENST00000416004 GAGE2EQ4V326 116 aa6.45□□□□□ -1.38
CHRNA1-206ENST00000416004 SMIM20Q8N5G0 67 aa6.45□□□□□ -1.38
CHRNA1-206ENST00000416004 TMEM126AQ9H061 195 aa6.45□□□□□ -1.38
CHRNA1-206ENST00000416004 GAGE2DQ9UEU5 116 aa6.45□□□□□ -1.38
CHRNA1-206ENST00000416004 APLNQ9ULZ1 77 aa6.45□□□□□ -1.38
CHRNA1-206ENST00000416004 TRGV4A0A0C4DH28 118 aa6.45□□□□□ -1.38
CHRNA1-206ENST00000416004 TRBV27A0A0K0K1C4 114 aa6.45□□□□□ -1.38
CHRNA1-206ENST00000416004 VCYO14598 125 aa6.45□□□□□ -1.38
CHRNA1-206ENST00000416004 IFITM1P13164 125 aa6.45□□□□□ -1.38
CHRNA1-206ENST00000416004 LAGE3Q14657 143 aa6.45□□□□□ -1.38
CHRNA1-206ENST00000416004 ZC2HC1BQ5TFG8 222 aa6.45□□□□□ -1.38
CHRNA1-206ENST00000416004 LYSTQ99698 3801 aa6.44□□□□□ -1.38
CHRNA1-206ENST00000416004 A0A087WX48 190 aa6.44□□□□□ -1.38
CHRNA1-206ENST00000416004 IGHV3-38A0A0C4DH36 116 aa6.44□□□□□ -1.38
CHRNA1-206ENST00000416004 MYMXA0A1B0GTQ4 84 aa6.44□□□□□ -1.38
CHRNA1-206ENST00000416004 SNCGO76070 127 aa6.44□□□□□ -1.38
CHRNA1-206ENST00000416004 TSHBP01222 138 aa6.44□□□□□ -1.38
CHRNA1-206ENST00000416004 PRSS1P07477 247 aa6.44□□□□□ -1.38
CHRNA1-206ENST00000416004 CARD19Q96LW7 228 aa6.44□□□□□ -1.38
CHRNA1-206ENST00000416004 SPANXDQ9BXN6 97 aa6.44□□□□□ -1.38
CHRNA1-206ENST00000416004 DYNC2H1Q8NCM8 4307 aaKnown RBP6.44□□□□□ -1.38
CHRNA1-206ENST00000416004 TRBV6-4A0A1B0GX49 114 aa6.43□□□□□ -1.38
CHRNA1-206ENST00000416004 ATP5G1P05496 136 aa6.43□□□□□ -1.38
CHRNA1-206ENST00000416004 MRPL23Q16540 153 aaKnown RBP6.43□□□□□ -1.38
CHRNA1-206ENST00000416004 C15orf53Q8NAA6 179 aa6.43□□□□□ -1.38
CHRNA1-206ENST00000416004 ZNRF2Q8NHG8 242 aa6.43□□□□□ -1.38
CHRNA1-206ENST00000416004 DNAJC30Q96LL9 226 aa6.43□□□□□ -1.38
CHRNA1-206ENST00000416004 TRBV10-1A0A0K0K1A3 114 aa6.43□□□□□ -1.38
CHRNA1-206ENST00000416004 I3L3M4 83 aa6.43□□□□□ -1.38
CHRNA1-206ENST00000416004 UBE2D1P51668 147 aa6.43□□□□□ -1.38
CHRNA1-206ENST00000416004 TTC32Q5I0X7 151 aa6.43□□□□□ -1.38
CHRNA1-206ENST00000416004 LINC01600Q96MT4 127 aa6.43□□□□□ -1.38
CHRNA1-206ENST00000416004 RYR3Q15413 4870 aa6.42□□□□□ -1.38
CHRNA1-206ENST00000416004 TRAV12-1A0A0B4J245 112 aa6.42□□□□□ -1.38
CHRNA1-206ENST00000416004 F5H768 121 aa6.42□□□□□ -1.38
CHRNA1-206ENST00000416004 ORMDL2Q53FV1 153 aa6.42□□□□□ -1.38
CHRNA1-206ENST00000416004 KIR2DL4Q99706 377 aa6.42□□□□□ -1.38
CHRNA1-206ENST00000416004 TTTY13Q9BZ97 58 aa6.42□□□□□ -1.38
CHRNA1-206ENST00000416004 K7EMI3 77 aa6.41□□□□□ -1.38
CHRNA1-206ENST00000416004 RPL36AP83881 106 aaKnown RBP6.41□□□□□ -1.38
CHRNA1-206ENST00000416004 RHOHQ15669 191 aa6.41□□□□□ -1.38
CHRNA1-206ENST00000416004 RPL36ALQ969Q0 106 aaKnown RBP6.41□□□□□ -1.38
CHRNA1-206ENST00000416004 SPANXCQ9NY87 97 aa6.41□□□□□ -1.38
CHRNA1-206ENST00000416004 SCGB1C2P0DMR2 95 aa6.41□□□□□ -1.38
CHRNA1-206ENST00000416004 LINC00694P0DN24 101 aa6.41□□□□□ -1.38
CHRNA1-206ENST00000416004 PSMB2P49721 201 aa6.41□□□□□ -1.38
CHRNA1-206ENST00000416004 RPL39P62891 51 aaKnown RBP6.41□□□□□ -1.38
CHRNA1-206ENST00000416004 MAPKAPK5-AS1Q8N8E1 139 aa6.41□□□□□ -1.38
CHRNA1-206ENST00000416004 VSIG2Q96IQ7 327 aa6.41□□□□□ -1.38
CHRNA1-206ENST00000416004 PRO0255Q9UI72 69 aa6.41□□□□□ -1.38
CHRNA1-206ENST00000416004 ALMS1Q8TCU4 4167 aa6.4□□□□□ -1.38
CHRNA1-206ENST00000416004 A0A0J9YY99 117 aa6.4□□□□□ -1.39
CHRNA1-206ENST00000416004 GYPEP15421 78 aa6.4□□□□□ -1.39
CHRNA1-206ENST00000416004 C2orf66Q6UXQ4 117 aa6.4□□□□□ -1.39
CHRNA1-206ENST00000416004 TOMM6Q96B49 74 aa6.4□□□□□ -1.39
CHRNA1-206ENST00000416004 PRADC1Q9BSG0 188 aa6.4□□□□□ -1.39
CHRNA1-206ENST00000416004 CCDC179H3BU77 68 aa6.39□□□□□ -1.39
CHRNA1-206ENST00000416004 PAX4O43316 350 aa6.39□□□□□ -1.39
CHRNA1-206ENST00000416004 NTM-AS1Q6ZSK4 140 aa6.39□□□□□ -1.39
CHRNA1-206ENST00000416004 ANKRD29Q8N6D5 301 aa6.39□□□□□ -1.39
CHRNA1-206ENST00000416004 CHCHD7Q9BUK0 85 aa6.39□□□□□ -1.39
CHRNA1-206ENST00000416004 MRPL35Q9NZE8 188 aaKnown RBP6.39□□□□□ -1.39
CHRNA1-206ENST00000416004 LINC01549A6NIU2 74 aa6.39□□□□□ -1.39
CHRNA1-206ENST00000416004 F8VRH5 84 aa6.39□□□□□ -1.39
CHRNA1-206ENST00000416004 CCL18P55774 89 aa6.39□□□□□ -1.39
CHRNA1-206ENST00000416004 C5orf47Q569G3 176 aa6.39□□□□□ -1.39
CHRNA1-206ENST00000416004 C20orf203Q8NBC4 194 aa6.39□□□□□ -1.39
CHRNA1-206ENST00000416004 RYR2Q92736 4967 aa6.38□□□□□ -1.39
CHRNA1-206ENST00000416004 LOC107984156A0A0G2JMH3 177 aa6.38□□□□□ -1.39
CHRNA1-206ENST00000416004 DAZ4Q86SG3 579 aaKnown RBP6.38□□□□□ -1.39
CHRNA1-206ENST00000416004 ARL17AQ8IVW1 177 aa6.38□□□□□ -1.39
CHRNA1-206ENST00000416004 DAZ3Q9NR90 486 aaKnown RBP6.38□□□□□ -1.39
CHRNA1-206ENST00000416004 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.37□□□□□ -1.39
CHRNA1-206ENST00000416004 A0A096LPF7 62 aa6.37□□□□□ -1.39
CHRNA1-206ENST00000416004 IGKV2-29A2NJV5 120 aaPredicted RBP6.37□□□□□ -1.39
CHRNA1-206ENST00000416004 IGIPA6NJ69 53 aa6.37□□□□□ -1.39
CHRNA1-206ENST00000416004 RPL13AP40429 203 aaKnown RBP6.37□□□□□ -1.39
CHRNA1-206ENST00000416004 SCGB3A1Q96QR1 104 aa6.37□□□□□ -1.39
CHRNA1-206ENST00000416004 OPRPNQ99935 248 aaPredicted RBP6.37□□□□□ -1.39
CHRNA1-206ENST00000416004 SACSQ9NZJ4 4579 aa6.37□□□□□ -1.39
CHRNA1-206ENST00000416004 TCL1BO95988 128 aa6.36□□□□□ -1.39
CHRNA1-206ENST00000416004 LINC00336Q6ZUF6 198 aa6.36□□□□□ -1.39
CHRNA1-206ENST00000416004 MEIG1Q5JSS6 88 aa6.36□□□□□ -1.39
CHRNA1-206ENST00000416004 FAM104AQ969W3 186 aa6.36□□□□□ -1.39
CHRNA1-206ENST00000416004 PLECQ15149 4684 aaKnown RBP6.35□□□□□ -1.39
CHRNA1-206ENST00000416004 FAM240AA0A1B0GVK7 77 aa6.35□□□□□ -1.39
CHRNA1-206ENST00000416004 SLC25A20O43772 301 aa6.35□□□□□ -1.39
CHRNA1-206ENST00000416004 C10orf126Q8N4M7 172 aa6.35□□□□□ -1.39
CHRNA1-206ENST00000416004 BAALCQ8WXS3 180 aa6.35□□□□□ -1.39
CHRNA1-206ENST00000416004 DNAH1Q9P2D7 4330 aa6.35□□□□□ -1.39
CHRNA1-206ENST00000416004 TRBV6-8A0A0A6YYG3 113 aa6.34□□□□□ -1.39
CHRNA1-206ENST00000416004 UBE2D4Q9Y2X8 147 aa6.34□□□□□ -1.39
CHRNA1-206ENST00000416004 IGLV4-3A0A075B6K6 122 aa6.34□□□□□ -1.39
CHRNA1-206ENST00000416004 TRAV8-4A0A0B4J246 113 aa6.34□□□□□ -1.39
CHRNA1-206ENST00000416004 H3BNG1 76 aa6.34□□□□□ -1.39
CHRNA1-206ENST00000416004 M0R2N4 97 aa6.34□□□□□ -1.39
CHRNA1-206ENST00000416004 SRSF9Q13242 221 aaKnown RBP eCLIP6.34□□□□□ -1.39
CHRNA1-206ENST00000416004 TIMM17AQ99595 171 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms