RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 FHL2Q14192 279 aa10.93□□□□□ -0.66
SHMT2-202ENST00000414700 IGHV3-30P01768 117 aa10.92□□□□□ -0.66
SHMT2-202ENST00000414700 IGHV3-30-5P0DP03 117 aa10.92□□□□□ -0.66
SHMT2-202ENST00000414700 C2orf66Q6UXQ4 117 aa10.92□□□□□ -0.66
SHMT2-202ENST00000414700 SLC25A29Q8N8R3 303 aa10.92□□□□□ -0.66
SHMT2-202ENST00000414700 IFITM1P13164 125 aa10.92□□□□□ -0.66
SHMT2-202ENST00000414700 PAPPA-AS1Q5QFB9 102 aa10.92□□□□□ -0.66
SHMT2-202ENST00000414700 SPANXA1Q9NS26 97 aa10.92□□□□□ -0.66
SHMT2-202ENST00000414700 PRO1854Q9UHT4 67 aa10.92□□□□□ -0.66
SHMT2-202ENST00000414700 TTC32Q5I0X7 151 aa10.91□□□□□ -0.66
SHMT2-202ENST00000414700 TRGV4A0A0C4DH28 118 aa10.91□□□□□ -0.66
SHMT2-202ENST00000414700 C9JAW5 83 aa10.91□□□□□ -0.66
SHMT2-202ENST00000414700 CCDC179H3BU77 68 aa10.91□□□□□ -0.66
SHMT2-202ENST00000414700 NANOS2P60321 138 aaKnown RBP10.91□□□□□ -0.66
SHMT2-202ENST00000414700 Q6ZTC4 211 aa10.91□□□□□ -0.66
SHMT2-202ENST00000414700 HTN3P15516 51 aa10.9□□□□□ -0.66
SHMT2-202ENST00000414700 DEFB104AQ8WTQ1 72 aa10.9□□□□□ -0.66
SHMT2-202ENST00000414700 LOC100131303A0A0U1RQF7 123 aa10.89□□□□□ -0.67
SHMT2-202ENST00000414700 RPL32P62910 135 aaKnown RBP10.89□□□□□ -0.67
SHMT2-202ENST00000414700 HERV-K104P63124 156 aa10.89□□□□□ -0.67
SHMT2-202ENST00000414700 C11orf45Q8TAV5 145 aa10.89□□□□□ -0.67
SHMT2-202ENST00000414700 CSMD3Q7Z407 3707 aa10.89□□□□□ -0.67
SHMT2-202ENST00000414700 C11orf86A6NJI1 115 aa10.89□□□□□ -0.67
SHMT2-202ENST00000414700 ATP5G1P05496 136 aa10.89□□□□□ -0.67
SHMT2-202ENST00000414700 IGLV4-69A0A075B6H9 119 aa10.88□□□□□ -0.67
SHMT2-202ENST00000414700 K7EQD1 137 aa10.88□□□□□ -0.67
SHMT2-202ENST00000414700 LINC01600Q96MT4 127 aa10.88□□□□□ -0.67
SHMT2-202ENST00000414700 EDA2RQ9HAV5 297 aa10.88□□□□□ -0.67
SHMT2-202ENST00000414700 F5H768 121 aa10.87□□□□□ -0.67
SHMT2-202ENST00000414700 SMIM20Q8N5G0 67 aa10.87□□□□□ -0.67
SHMT2-202ENST00000414700 DNAH7Q8WXX0 4024 aa10.87□□□□□ -0.67
SHMT2-202ENST00000414700 TRBV6-4A0A1B0GX49 114 aa10.86□□□□□ -0.67
SHMT2-202ENST00000414700 RPL13AP40429 203 aaKnown RBP10.86□□□□□ -0.67
SHMT2-202ENST00000414700 TRAV8-4A0A0B4J246 113 aa10.85□□□□□ -0.67
SHMT2-202ENST00000414700 SDHAF1A6NFY7 115 aa10.85□□□□□ -0.67
SHMT2-202ENST00000414700 PPP1R17O96001 155 aa10.85□□□□□ -0.67
SHMT2-202ENST00000414700 IGHV3-33P01772 117 aa10.85□□□□□ -0.67
SHMT2-202ENST00000414700 NTN5Q8WTR8 489 aaPredicted RBP10.85□□□□□ -0.67
SHMT2-202ENST00000414700 TRBV6-5A0A0K0K1A5 114 aa10.85□□□□□ -0.67
SHMT2-202ENST00000414700 TSPEAR-AS2P59090 65 aa10.85□□□□□ -0.67
SHMT2-202ENST00000414700 ZNRF2Q8NHG8 242 aa10.85□□□□□ -0.67
SHMT2-202ENST00000414700 VSIG2Q96IQ7 327 aa10.85□□□□□ -0.67
SHMT2-202ENST00000414700 PRO0255Q9UI72 69 aa10.85□□□□□ -0.67
SHMT2-202ENST00000414700 A0A0B4J2C4 111 aa10.84□□□□□ -0.67
SHMT2-202ENST00000414700 POLR2KP53803 58 aaKnown RBP10.84□□□□□ -0.67
SHMT2-202ENST00000414700 PMVKQ15126 192 aa10.84□□□□□ -0.67
SHMT2-202ENST00000414700 ATXN8Q156A1 80 aa10.84□□□□□ -0.67
SHMT2-202ENST00000414700 RHOHQ15669 191 aa10.84□□□□□ -0.67
SHMT2-202ENST00000414700 LINC01620Q4KN68 170 aa10.84□□□□□ -0.67
SHMT2-202ENST00000414700 AMELXQ99217 191 aa10.84□□□□□ -0.67
SHMT2-202ENST00000414700 TNFRSF18Q9Y5U5 241 aa10.84□□□□□ -0.67
SHMT2-202ENST00000414700 IGHV3-38A0A0C4DH36 116 aa10.83□□□□□ -0.68
SHMT2-202ENST00000414700 TSHBP01222 138 aa10.83□□□□□ -0.68
SHMT2-202ENST00000414700 MRPL23Q16540 153 aaKnown RBP10.83□□□□□ -0.68
SHMT2-202ENST00000414700 C15orf53Q8NAA6 179 aa10.83□□□□□ -0.68
SHMT2-202ENST00000414700 TMEM141Q96I45 108 aa10.83□□□□□ -0.68
SHMT2-202ENST00000414700 TRBV10-1A0A0K0K1A3 114 aa10.82□□□□□ -0.68
SHMT2-202ENST00000414700 A4D1N5 150 aa10.82□□□□□ -0.68
SHMT2-202ENST00000414700 GYPEP15421 78 aa10.82□□□□□ -0.68
SHMT2-202ENST00000414700 IGIPA6NJ69 53 aa10.82□□□□□ -0.68
SHMT2-202ENST00000414700 J3QQQ9 107 aa10.82□□□□□ -0.68
SHMT2-202ENST00000414700 PAX4O43316 350 aa10.82□□□□□ -0.68
SHMT2-202ENST00000414700 LGALS3P17931 250 aaKnown RBP10.82□□□□□ -0.68
SHMT2-202ENST00000414700 DEFB131BA0A096LNP1 70 aa10.81□□□□□ -0.68
SHMT2-202ENST00000414700 TRBV27A0A0K0K1C4 114 aa10.81□□□□□ -0.68
SHMT2-202ENST00000414700 EIF4EBP3O60516 100 aaPredicted RBP10.81□□□□□ -0.68
SHMT2-202ENST00000414700 RPL36AP83881 106 aaKnown RBP10.81□□□□□ -0.68
SHMT2-202ENST00000414700 RPL36ALQ969Q0 106 aaKnown RBP10.81□□□□□ -0.68
SHMT2-202ENST00000414700 LYSTQ99698 3801 aa10.81□□□□□ -0.68
SHMT2-202ENST00000414700 A0A096LPF7 62 aa10.8□□□□□ -0.68
SHMT2-202ENST00000414700 TRBV10-2A0A0K0K1G8 114 aa10.8□□□□□ -0.68
SHMT2-202ENST00000414700 TMEM170BQ5T4T1 132 aa10.8□□□□□ -0.68
SHMT2-202ENST00000414700 UBE2WQ96B02 151 aa10.8□□□□□ -0.68
SHMT2-202ENST00000414700 DNAJC30Q96LL9 226 aa10.8□□□□□ -0.68
SHMT2-202ENST00000414700 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.8□□□□□ -0.68
SHMT2-202ENST00000414700 TIMM17AQ99595 171 aa10.8□□□□□ -0.68
SHMT2-202ENST00000414700 TENM2Q9NT68 2774 aa10.8□□□□□ -0.68
SHMT2-202ENST00000414700 LINC00694P0DN24 101 aa10.79□□□□□ -0.68
SHMT2-202ENST00000414700 VCYO14598 125 aa10.79□□□□□ -0.68
SHMT2-202ENST00000414700 MEIG1Q5JSS6 88 aa10.79□□□□□ -0.68
SHMT2-202ENST00000414700 TEX49A0A1B0GTD5 131 aa10.78□□□□□ -0.68
SHMT2-202ENST00000414700 H7C2G1 150 aa10.78□□□□□ -0.68
SHMT2-202ENST00000414700 I3L3M4 83 aa10.78□□□□□ -0.68
SHMT2-202ENST00000414700 LEPROTO15243 131 aa10.78□□□□□ -0.68
SHMT2-202ENST00000414700 Q1RN00 199 aa10.78□□□□□ -0.68
SHMT2-202ENST00000414700 TMEM126AQ9H061 195 aa10.77□□□□□ -0.68
SHMT2-202ENST00000414700 DYNC2H1Q8NCM8 4307 aaKnown RBP10.77□□□□□ -0.69
SHMT2-202ENST00000414700 TRBV30A0A0K0K1B3 111 aa10.77□□□□□ -0.69
SHMT2-202ENST00000414700 STARD9Q9P2P6 4700 aa10.76□□□□□ -0.69
SHMT2-202ENST00000414700 NTM-AS1Q6ZSK4 140 aa10.76□□□□□ -0.69
SHMT2-202ENST00000414700 MUSTN1Q8IVN3 82 aa10.76□□□□□ -0.69
SHMT2-202ENST00000414700 TRAV10A0A0B4J240 114 aa10.75□□□□□ -0.69
SHMT2-202ENST00000414700 FAM240AA0A1B0GVK7 77 aa10.75□□□□□ -0.69
SHMT2-202ENST00000414700 DAZ4Q86SG3 579 aaKnown RBP10.75□□□□□ -0.69
SHMT2-202ENST00000414700 DAZ3Q9NR90 486 aaKnown RBP10.75□□□□□ -0.69
SHMT2-202ENST00000414700 TMEM223A0PJW6 202 aa10.74□□□□□ -0.69
SHMT2-202ENST00000414700 H3BT86 120 aa10.74□□□□□ -0.69
SHMT2-202ENST00000414700 RPL39P62891 51 aaKnown RBP10.74□□□□□ -0.69
SHMT2-202ENST00000414700 C2orf82Q6UX34 121 aa10.74□□□□□ -0.69
SHMT2-202ENST00000414700 TRBV7-7A0A0K0K1E9 115 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms