RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 LINC01549A6NIU2 74 aa16.29■□□□□ 0.2
CPNE1-207ENST00000414664 IGIPA6NJ69 53 aa16.29■□□□□ 0.2
CPNE1-207ENST00000414664 FAM229AH3BQW9 127 aa16.29■□□□□ 0.2
CPNE1-207ENST00000414664 FA2HQ7L5A8 372 aa16.29■□□□□ 0.2
CPNE1-207ENST00000414664 TOMM6Q96B49 74 aa16.29■□□□□ 0.2
CPNE1-207ENST00000414664 VCX2Q9H322 139 aa16.29■□□□□ 0.2
CPNE1-207ENST00000414664 SCXQ7RTU7 201 aa16.28■□□□□ 0.2
CPNE1-207ENST00000414664 SMCO4Q9NRQ5 59 aa16.28■□□□□ 0.2
CPNE1-207ENST00000414664 TIMM17AQ99595 171 aa16.27■□□□□ 0.2
CPNE1-207ENST00000414664 IGHV3OR16-9A0A0B4J2B5 98 aa16.26■□□□□ 0.19
CPNE1-207ENST00000414664 AMELXQ99217 191 aa16.26■□□□□ 0.19
CPNE1-207ENST00000414664 Q5VSD8 79 aa16.25■□□□□ 0.19
CPNE1-207ENST00000414664 CIRBP-AS1Q8TBR5 109 aa16.25■□□□□ 0.19
CPNE1-207ENST00000414664 YPEL4Q96NS1 127 aa16.25■□□□□ 0.19
CPNE1-207ENST00000414664 LINC00242Q5T6M2 205 aa16.24■□□□□ 0.19
CPNE1-207ENST00000414664 ERASQ7Z444 233 aa16.24■□□□□ 0.19
CPNE1-207ENST00000414664 SCGB3A1Q96QR1 104 aa16.24■□□□□ 0.19
CPNE1-207ENST00000414664 PKIGQ9Y2B9 76 aa16.24■□□□□ 0.19
CPNE1-207ENST00000414664 UBE2D1P51668 147 aa16.23■□□□□ 0.19
CPNE1-207ENST00000414664 SYCNQ0VAF6 134 aa16.23■□□□□ 0.19
CPNE1-207ENST00000414664 LINC00526Q96FQ7 95 aa16.23■□□□□ 0.19
CPNE1-207ENST00000414664 CARD19Q96LW7 228 aa16.23■□□□□ 0.19
CPNE1-207ENST00000414664 IGLV4-69A0A075B6H9 119 aa16.22■□□□□ 0.19
CPNE1-207ENST00000414664 OR10D4PQ8NGN7 298 aa16.22■□□□□ 0.19
CPNE1-207ENST00000414664 LINC00173Q6ZV60 143 aa16.21■□□□□ 0.19
CPNE1-207ENST00000414664 C18orf32Q8TCD1 76 aa16.21■□□□□ 0.19
CPNE1-207ENST00000414664 C2orf48Q96LS8 159 aa16.21■□□□□ 0.19
CPNE1-207ENST00000414664 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP16.21■□□□□ 0.19
CPNE1-207ENST00000414664 COX6A2Q02221 97 aa16.2■□□□□ 0.18
CPNE1-207ENST00000414664 CBLN2Q8IUK8 224 aa16.2■□□□□ 0.18
CPNE1-207ENST00000414664 DPH3Q96FX2 82 aa16.2■□□□□ 0.18
CPNE1-207ENST00000414664 PCLOQ9Y6V0 5065 aa16.2■□□□□ 0.18
CPNE1-207ENST00000414664 A0A087WZ39 114 aa16.19■□□□□ 0.18
CPNE1-207ENST00000414664 LINC00614P0C842 121 aa16.19■□□□□ 0.18
CPNE1-207ENST00000414664 SEC11AP67812 179 aa16.19■□□□□ 0.18
CPNE1-207ENST00000414664 SPAG11BQ08648 103 aa16.19■□□□□ 0.18
CPNE1-207ENST00000414664 CIRBPQ14011 172 aaKnown RBP16.19■□□□□ 0.18
CPNE1-207ENST00000414664 ZC2HC1BQ5TFG8 222 aa16.19■□□□□ 0.18
CPNE1-207ENST00000414664 ORAOV1Q8WV07 137 aa16.19■□□□□ 0.18
CPNE1-207ENST00000414664 CAMK2N2Q96S95 79 aa16.19■□□□□ 0.18
CPNE1-207ENST00000414664 ABCA13Q86UQ4 5058 aa16.18■□□□□ 0.18
CPNE1-207ENST00000414664 RAB5BP61020 215 aa16.18■□□□□ 0.18
CPNE1-207ENST00000414664 LINC00528Q8N1L1 170 aa16.18■□□□□ 0.18
CPNE1-207ENST00000414664 F8WDY8 70 aa16.17■□□□□ 0.18
CPNE1-207ENST00000414664 FAM19A3Q7Z5A8 133 aa16.17■□□□□ 0.18
CPNE1-207ENST00000414664 FAT1Q14517 4588 aa16.16■□□□□ 0.18
CPNE1-207ENST00000414664 PANO1I0J062 215 aa16.16■□□□□ 0.18
CPNE1-207ENST00000414664 PLA2G1BP04054 148 aaKnown RBP16.16■□□□□ 0.18
CPNE1-207ENST00000414664 LINC01561Q8N1V8 128 aa16.16■□□□□ 0.18
CPNE1-207ENST00000414664 SPACA4Q8TDM5 124 aa16.15■□□□□ 0.18
CPNE1-207ENST00000414664 HERVK_113P63121 156 aa16.14■□□□□ 0.17
CPNE1-207ENST00000414664 Q6ZRU5 148 aa16.14■□□□□ 0.17
CPNE1-207ENST00000414664 CHTF8P0CG12 524 aa16.13■□□□□ 0.17
CPNE1-207ENST00000414664 LINC00474Q9P2X8 69 aa16.13■□□□□ 0.17
CPNE1-207ENST00000414664 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP16.12■□□□□ 0.17
CPNE1-207ENST00000414664 URB1-AS1Q96HZ7 61 aa16.12■□□□□ 0.17
CPNE1-207ENST00000414664 GEMIN7Q9H840 131 aaKnown RBP16.12■□□□□ 0.17
CPNE1-207ENST00000414664 IGKV2-24A0A0C4DH68 120 aa16.11■□□□□ 0.17
CPNE1-207ENST00000414664 HBDP02042 147 aa16.11■□□□□ 0.17
CPNE1-207ENST00000414664 A0A087WYN8 130 aa16.1■□□□□ 0.17
CPNE1-207ENST00000414664 NDUFA1O15239 70 aa16.1■□□□□ 0.17
CPNE1-207ENST00000414664 RNF151Q2KHN1 245 aa16.1■□□□□ 0.17
CPNE1-207ENST00000414664 MAJINQ3KP22 176 aa16.1■□□□□ 0.17
CPNE1-207ENST00000414664 LOC107984640A0A0U1RRK4 108 aa16.09■□□□□ 0.17
CPNE1-207ENST00000414664 INAFM2P0DMQ5 153 aa16.09■□□□□ 0.17
CPNE1-207ENST00000414664 PMVKQ15126 192 aa16.09■□□□□ 0.17
CPNE1-207ENST00000414664 A0A096LNI7 61 aa16.08■□□□□ 0.16
CPNE1-207ENST00000414664 A0A0J9YXV3 536 aa16.08■□□□□ 0.16
CPNE1-207ENST00000414664 CST9LQ9H4G1 147 aa16.08■□□□□ 0.16
CPNE1-207ENST00000414664 MRPL35Q9NZE8 188 aaKnown RBP16.08■□□□□ 0.16
CPNE1-207ENST00000414664 A0A096LNJ9 63 aa16.07■□□□□ 0.16
CPNE1-207ENST00000414664 PACRGQ96M98 296 aaPredicted RBP16.07■□□□□ 0.16
CPNE1-207ENST00000414664 PLAC8Q9NZF1 115 aa16.07■□□□□ 0.16
CPNE1-207ENST00000414664 CHCHD1Q96BP2 118 aaKnown RBP16.06■□□□□ 0.16
CPNE1-207ENST00000414664 CDKN2A-AS1Q9UH64 79 aa16.06■□□□□ 0.16
CPNE1-207ENST00000414664 TINCRA0A1B0GVN0 87 aa16.05■□□□□ 0.16
CPNE1-207ENST00000414664 PRSS2P07478 247 aa16.05■□□□□ 0.16
CPNE1-207ENST00000414664 KIAA0087Q14695 138 aa16.05■□□□□ 0.16
CPNE1-207ENST00000414664 ATP5LO75964 103 aa16.04■□□□□ 0.16
CPNE1-207ENST00000414664 TRGC2P03986 189 aa16.04■□□□□ 0.16
CPNE1-207ENST00000414664 PMCHL1Q16048 86 aa16.04■□□□□ 0.16
CPNE1-207ENST00000414664 STPG4Q8N801 248 aa16.04■□□□□ 0.16
CPNE1-207ENST00000414664 PTTG1IPP53801 180 aa16.03■□□□□ 0.16
CPNE1-207ENST00000414664 GAGE2BQ13066 116 aa16.03■□□□□ 0.16
CPNE1-207ENST00000414664 PDZD11Q5EBL8 140 aa16.03■□□□□ 0.16
CPNE1-207ENST00000414664 LINC00469Q8N7U9 141 aa16.03■□□□□ 0.16
CPNE1-207ENST00000414664 VPS13BQ7Z7G8 4022 aa16.03■□□□□ 0.16
CPNE1-207ENST00000414664 NDUFA6P56556 154 aa16.02■□□□□ 0.16
CPNE1-207ENST00000414664 UNQ6190/PRO20217Q6UXQ8 127 aa16.02■□□□□ 0.16
CPNE1-207ENST00000414664 COLCA2A8K830 154 aa16.01■□□□□ 0.15
CPNE1-207ENST00000414664 BAGE3Q86Y29 109 aa16.01■□□□□ 0.15
CPNE1-207ENST00000414664 TOMM7Q9P0U1 55 aa16.01■□□□□ 0.15
CPNE1-207ENST00000414664 RPL37AP61513 92 aaKnown RBP16■□□□□ 0.15
CPNE1-207ENST00000414664 RPL18AQ02543 176 aaKnown RBP16■□□□□ 0.15
CPNE1-207ENST00000414664 C6orf226Q5I0X4 101 aa16■□□□□ 0.15
CPNE1-207ENST00000414664 C10orf25Q5T742 122 aa16■□□□□ 0.15
CPNE1-207ENST00000414664 Q8IZM0 81 aa16■□□□□ 0.15
CPNE1-207ENST00000414664 IGLV5-45A0A087WSX0 123 aa15.99■□□□□ 0.15
CPNE1-207ENST00000414664 TRBV30A0A0K0K1B3 111 aa15.99■□□□□ 0.15
CPNE1-207ENST00000414664 CKS1BP61024 79 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms