RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ZCCHC13Q8WW36 166 aaKnown RBP2.28□□□□□ -2.04
SF3B1-203ENST00000414174 DMAC1Q96GE9 116 aa2.28□□□□□ -2.04
SF3B1-203ENST00000414174 C16orf74Q96GX8 76 aa2.28□□□□□ -2.04
SF3B1-203ENST00000414174 UBL5Q9BZL1 73 aa2.28□□□□□ -2.04
SF3B1-203ENST00000414174 EML5Q05BV3 1969 aa2.28□□□□□ -2.04
SF3B1-203ENST00000414174 A0A0G2JMZ2 1700 aa2.28□□□□□ -2.05
SF3B1-203ENST00000414174 LRRC37A2A6NM11 1700 aa2.28□□□□□ -2.05
SF3B1-203ENST00000414174 LRRC37AA6NMS7 1700 aa2.28□□□□□ -2.05
SF3B1-203ENST00000414174 TET2Q6N021 2002 aaPredicted RBP2.27□□□□□ -2.05
SF3B1-203ENST00000414174 TRAV40A0A0B4J280 105 aa2.27□□□□□ -2.05
SF3B1-203ENST00000414174 IGKV1-17P01599 117 aa2.27□□□□□ -2.05
SF3B1-203ENST00000414174 GIG44P09565 113 aaPredicted RBP2.27□□□□□ -2.05
SF3B1-203ENST00000414174 IL9P15248 144 aa2.27□□□□□ -2.05
SF3B1-203ENST00000414174 KRTAP25-1Q3LHN0 102 aa2.27□□□□□ -2.05
SF3B1-203ENST00000414174 HIGD2BQ4VC39 106 aa2.27□□□□□ -2.05
SF3B1-203ENST00000414174 ENHOQ6UWT2 76 aa2.27□□□□□ -2.05
SF3B1-203ENST00000414174 TMEM14CQ9P0S9 112 aa2.27□□□□□ -2.05
SF3B1-203ENST00000414174 C4AP0C0L4 1744 aa2.27□□□□□ -2.05
SF3B1-203ENST00000414174 C4BP0C0L5 1744 aa2.27□□□□□ -2.05
SF3B1-203ENST00000414174 COL4A1P02462 1669 aa2.27□□□□□ -2.05
SF3B1-203ENST00000414174 NACAE9PAV3 2078 aa2.27□□□□□ -2.05
SF3B1-203ENST00000414174 MYOFQ9NZM1 2061 aa2.27□□□□□ -2.05
SF3B1-203ENST00000414174 PCDH15Q96QU1 1955 aa2.27□□□□□ -2.05
SF3B1-203ENST00000414174 NOTCH3Q9UM47 2321 aa2.26□□□□□ -2.05
SF3B1-203ENST00000414174 BRWD3Q6RI45 1802 aa2.26□□□□□ -2.05
SF3B1-203ENST00000414174 ZNF831Q5JPB2 1677 aa2.26□□□□□ -2.05
SF3B1-203ENST00000414174 A0A1B0GU33 70 aa2.26□□□□□ -2.05
SF3B1-203ENST00000414174 NDUFAF8A1L188 74 aa2.26□□□□□ -2.05
SF3B1-203ENST00000414174 LRCOL1A6NCL2 159 aa2.26□□□□□ -2.05
SF3B1-203ENST00000414174 NUPR2A6NF83 97 aa2.26□□□□□ -2.05
SF3B1-203ENST00000414174 I3L3M4 83 aa2.26□□□□□ -2.05
SF3B1-203ENST00000414174 M0R135 149 aa2.26□□□□□ -2.05
SF3B1-203ENST00000414174 FXYD3Q14802 87 aa2.26□□□□□ -2.05
SF3B1-203ENST00000414174 FDCSPQ8NFU4 85 aa2.26□□□□□ -2.05
SF3B1-203ENST00000414174 TTTY12Q9BZ98 90 aa2.26□□□□□ -2.05
SF3B1-203ENST00000414174 MRPL36Q9P0J6 103 aaKnown RBP2.26□□□□□ -2.05
SF3B1-203ENST00000414174 MINOS1-NBL1R4GNA1 71 aa2.26□□□□□ -2.05
SF3B1-203ENST00000414174 BAZ2BQ9UIF8 2168 aaKnown RBP2.26□□□□□ -2.05
SF3B1-203ENST00000414174 BCORQ6W2J9 1755 aa2.26□□□□□ -2.05
SF3B1-203ENST00000414174 SCN3AQ9NY46 2000 aa2.25□□□□□ -2.05
SF3B1-203ENST00000414174 SVILO95425 2214 aa2.25□□□□□ -2.05
SF3B1-203ENST00000414174 TRAV21A0A0B4J279 112 aa2.25□□□□□ -2.05
SF3B1-203ENST00000414174 A0A1W2PPR1 153 aa2.25□□□□□ -2.05
SF3B1-203ENST00000414174 IGLV7-43P04211 117 aa2.25□□□□□ -2.05
SF3B1-203ENST00000414174 KIF26BQ2KJY2 2108 aa2.25□□□□□ -2.05
SF3B1-203ENST00000414174 COX7B2Q8TF08 81 aa2.25□□□□□ -2.05
SF3B1-203ENST00000414174 LINC00208Q96KT6 92 aa2.25□□□□□ -2.05
SF3B1-203ENST00000414174 RNF5Q99942 180 aa2.25□□□□□ -2.05
SF3B1-203ENST00000414174 TMEM167BQ9NRX6 74 aa2.25□□□□□ -2.05
SF3B1-203ENST00000414174 NCOA6Q14686 2063 aaPredicted RBP2.25□□□□□ -2.05
SF3B1-203ENST00000414174 HEATR1Q9H583 2144 aaKnown RBP2.24□□□□□ -2.05
SF3B1-203ENST00000414174 MPDZO75970 2070 aa2.24□□□□□ -2.05
SF3B1-203ENST00000414174 IGKV3-7A0A075B6H7 116 aa2.24□□□□□ -2.05
SF3B1-203ENST00000414174 JMJD7-PLA2G4BH0Y9G9 81 aa2.24□□□□□ -2.05
SF3B1-203ENST00000414174 M0R3E3 92 aa2.24□□□□□ -2.05
SF3B1-203ENST00000414174 CTSGP08311 255 aa2.24□□□□□ -2.05
SF3B1-203ENST00000414174 ERHP84090 104 aaKnown RBP2.24□□□□□ -2.05
SF3B1-203ENST00000414174 Q5W150 140 aa2.24□□□□□ -2.05
SF3B1-203ENST00000414174 C9orf163Q8N9P6 203 aa2.24□□□□□ -2.05
SF3B1-203ENST00000414174 KLK12Q9UKR0 248 aa2.24□□□□□ -2.05
SF3B1-203ENST00000414174 SHROOM3Q8TF72 1996 aa2.23□□□□□ -2.05
SF3B1-203ENST00000414174 IGKV3D-15A0A087WSY6 115 aa2.23□□□□□ -2.05
SF3B1-203ENST00000414174 TRBV6-1A0A0K0K1D8 114 aa2.23□□□□□ -2.05
SF3B1-203ENST00000414174 M0R1W7 72 aa2.23□□□□□ -2.05
SF3B1-203ENST00000414174 IGKV3-20P01619 116 aa2.23□□□□□ -2.05
SF3B1-203ENST00000414174 CCL18P55774 89 aa2.23□□□□□ -2.05
SF3B1-203ENST00000414174 LCE1FQ5T754 118 aa2.23□□□□□ -2.05
SF3B1-203ENST00000414174 LYPD1Q8N2G4 141 aa2.23□□□□□ -2.05
SF3B1-203ENST00000414174 TIMM8BQ9Y5J9 83 aaPredicted RBP2.23□□□□□ -2.05
SF3B1-203ENST00000414174 R4GMQ9 66 aa2.23□□□□□ -2.05
SF3B1-203ENST00000414174 MYO7AQ13402 2215 aa2.23□□□□□ -2.05
SF3B1-203ENST00000414174 ARL14EPLP0DKL9 152 aa2.22□□□□□ -2.05
SF3B1-203ENST00000414174 CCL3L1P16619 93 aa2.22□□□□□ -2.05
SF3B1-203ENST00000414174 PDE6GP18545 87 aa2.22□□□□□ -2.05
SF3B1-203ENST00000414174 PDE6HQ13956 83 aa2.22□□□□□ -2.05
SF3B1-203ENST00000414174 C9orf129Q5T035 196 aaKnown RBP2.22□□□□□ -2.05
SF3B1-203ENST00000414174 HCP5Q6MZN7 132 aa2.22□□□□□ -2.05
SF3B1-203ENST00000414174 SPATA8Q6RVD6 105 aa2.22□□□□□ -2.05
SF3B1-203ENST00000414174 SPRR4Q96PI1 79 aa2.22□□□□□ -2.05
SF3B1-203ENST00000414174 MYO7BQ6PIF6 2116 aa2.21□□□□□ -2.06
SF3B1-203ENST00000414174 H0Y9P7 68 aa2.21□□□□□ -2.06
SF3B1-203ENST00000414174 UQCR11O14957 56 aa2.21□□□□□ -2.06
SF3B1-203ENST00000414174 NDUFA3O95167 84 aa2.21□□□□□ -2.06
SF3B1-203ENST00000414174 ZNF137PP52743 207 aa2.21□□□□□ -2.06
SF3B1-203ENST00000414174 SPINK7P58062 85 aa2.21□□□□□ -2.06
SF3B1-203ENST00000414174 DEFB114Q30KQ6 69 aa2.21□□□□□ -2.06
SF3B1-203ENST00000414174 C10orf113Q5VZT2 155 aa2.21□□□□□ -2.06
SF3B1-203ENST00000414174 LINC00322Q6ZN03 302 aaPredicted RBP2.21□□□□□ -2.06
SF3B1-203ENST00000414174 LITAFQ99732 161 aa2.21□□□□□ -2.06
SF3B1-203ENST00000414174 HIGD2AQ9BW72 106 aa2.21□□□□□ -2.06
SF3B1-203ENST00000414174 NRXN2Q9P2S2 1712 aa2.21□□□□□ -2.06
SF3B1-203ENST00000414174 ABCA7Q8IZY2 2146 aa2.21□□□□□ -2.06
SF3B1-203ENST00000414174 IGLV3-19P01714 112 aa2.2□□□□□ -2.06
SF3B1-203ENST00000414174 MGPP08493 103 aa2.2□□□□□ -2.06
SF3B1-203ENST00000414174 RPL38P63173 70 aaKnown RBP2.2□□□□□ -2.06
SF3B1-203ENST00000414174 NDPQ00604 133 aa2.2□□□□□ -2.06
SF3B1-203ENST00000414174 RPS27LQ71UM5 84 aaKnown RBP2.2□□□□□ -2.06
SF3B1-203ENST00000414174 ST20-AS1Q8NBB2 130 aa2.2□□□□□ -2.06
SF3B1-203ENST00000414174 WFDC9Q8NEX5 89 aa2.2□□□□□ -2.06
SF3B1-203ENST00000414174 HEATR5BQ9P2D3 2071 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 182.7 ms