RNA–Protein interactions for RNA: ENST00000414017.5

HLA-DMB-257, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-257ENST00000414017 HIST1H2BHQ93079 126 aa6.89□□□□□ -1.31
HLA-DMB-257ENST00000414017 HIST1H2BNQ99877 126 aa6.89□□□□□ -1.31
HLA-DMB-257ENST00000414017 HIST1H2BMQ99879 126 aa6.89□□□□□ -1.31
HLA-DMB-257ENST00000414017 PGPEP1Q9NXJ5 209 aa6.89□□□□□ -1.31
HLA-DMB-257ENST00000414017 EPPK1P58107 5090 aaKnown RBP6.89□□□□□ -1.31
HLA-DMB-257ENST00000414017 DNAH5Q8TE73 4624 aa6.88□□□□□ -1.31
HLA-DMB-257ENST00000414017 PKHD1P08F94 4074 aa6.88□□□□□ -1.31
HLA-DMB-257ENST00000414017 IGLV5-52A0A0A0MRZ9 124 aa6.88□□□□□ -1.31
HLA-DMB-257ENST00000414017 LINC01549A6NIU2 74 aa6.88□□□□□ -1.31
HLA-DMB-257ENST00000414017 FOXI1Q12951 378 aa6.88□□□□□ -1.31
HLA-DMB-257ENST00000414017 HIGD2BQ4VC39 106 aa6.88□□□□□ -1.31
HLA-DMB-257ENST00000414017 CD164L2Q6UWJ8 174 aa6.88□□□□□ -1.31
HLA-DMB-257ENST00000414017 DYNC1H1Q14204 4646 aaKnown RBP6.88□□□□□ -1.31
HLA-DMB-257ENST00000414017 hDV102S1A0JD36 115 aa6.87□□□□□ -1.31
HLA-DMB-257ENST00000414017 C16orf90A8MZG2 172 aa6.87□□□□□ -1.31
HLA-DMB-257ENST00000414017 H0Y8G0 127 aa6.87□□□□□ -1.31
HLA-DMB-257ENST00000414017 COX7A2LO14548 114 aa6.87□□□□□ -1.31
HLA-DMB-257ENST00000414017 NUPR1O60356 82 aa6.87□□□□□ -1.31
HLA-DMB-257ENST00000414017 UBE2D1P51668 147 aa6.87□□□□□ -1.31
HLA-DMB-257ENST00000414017 C14orf177Q52M58 125 aa6.87□□□□□ -1.31
HLA-DMB-257ENST00000414017 CFAP161Q6P656 301 aa6.87□□□□□ -1.31
HLA-DMB-257ENST00000414017 LINC00173Q6ZV60 143 aa6.87□□□□□ -1.31
HLA-DMB-257ENST00000414017 AMELXQ99217 191 aa6.87□□□□□ -1.31
HLA-DMB-257ENST00000414017 ATP5LO75964 103 aa6.86□□□□□ -1.31
HLA-DMB-257ENST00000414017 PRSS1P07477 247 aa6.86□□□□□ -1.31
HLA-DMB-257ENST00000414017 NPSP0C0P6 89 aa6.86□□□□□ -1.31
HLA-DMB-257ENST00000414017 FABP4P15090 132 aa6.86□□□□□ -1.31
HLA-DMB-257ENST00000414017 LINC00310P59036 64 aa6.86□□□□□ -1.31
HLA-DMB-257ENST00000414017 COX6A2Q02221 97 aa6.86□□□□□ -1.31
HLA-DMB-257ENST00000414017 PMVKQ15126 192 aa6.86□□□□□ -1.31
HLA-DMB-257ENST00000414017 PDZD11Q5EBL8 140 aa6.86□□□□□ -1.31
HLA-DMB-257ENST00000414017 GEMIN7Q9H840 131 aaKnown RBP6.86□□□□□ -1.31
HLA-DMB-257ENST00000414017 A0A0J9YXV3 536 aa6.85□□□□□ -1.31
HLA-DMB-257ENST00000414017 LEPROTL1O95214 131 aa6.85□□□□□ -1.31
HLA-DMB-257ENST00000414017 LINC00242Q5T6M2 205 aa6.85□□□□□ -1.31
HLA-DMB-257ENST00000414017 C15orf56Q8N910 161 aa6.85□□□□□ -1.31
HLA-DMB-257ENST00000414017 LINC00526Q96FQ7 95 aa6.85□□□□□ -1.31
HLA-DMB-257ENST00000414017 CST9LQ9H4G1 147 aa6.85□□□□□ -1.31
HLA-DMB-257ENST00000414017 IGHV1-58A0A0C4DH39 117 aa6.84□□□□□ -1.31
HLA-DMB-257ENST00000414017 LINC00469Q8N7U9 141 aa6.84□□□□□ -1.31
HLA-DMB-257ENST00000414017 IFI27L1Q96BM0 104 aa6.84□□□□□ -1.31
HLA-DMB-257ENST00000414017 ZNF561-AS1K7EIQ3 104 aa6.83□□□□□ -1.32
HLA-DMB-257ENST00000414017 APOMO95445 188 aa6.83□□□□□ -1.32
HLA-DMB-257ENST00000414017 LINC01620Q4KN68 170 aa6.83□□□□□ -1.32
HLA-DMB-257ENST00000414017 NTN5Q8WTR8 489 aaPredicted RBP6.83□□□□□ -1.32
HLA-DMB-257ENST00000414017 ORAOV1Q8WV07 137 aa6.83□□□□□ -1.32
HLA-DMB-257ENST00000414017 LRP1BQ9NZR2 4599 aa6.82□□□□□ -1.32
HLA-DMB-257ENST00000414017 IGHV3OR16-9A0A0B4J2B5 98 aa6.82□□□□□ -1.32
HLA-DMB-257ENST00000414017 HERVK_113P63121 156 aa6.82□□□□□ -1.32
HLA-DMB-257ENST00000414017 SEC11AP67812 179 aa6.82□□□□□ -1.32
HLA-DMB-257ENST00000414017 PACRGQ96M98 296 aaPredicted RBP6.82□□□□□ -1.32
HLA-DMB-257ENST00000414017 CHAC1Q9BUX1 264 aa6.82□□□□□ -1.32
HLA-DMB-257ENST00000414017 HSPB8Q9UJY1 196 aa6.82□□□□□ -1.32
HLA-DMB-257ENST00000414017 CHTOPQ9Y3Y2 248 aaKnown RBP6.82□□□□□ -1.32
HLA-DMB-257ENST00000414017 TINCRA0A1B0GVN0 87 aa6.81□□□□□ -1.32
HLA-DMB-257ENST00000414017 GCSHP23434 173 aa6.81□□□□□ -1.32
HLA-DMB-257ENST00000414017 SPAG11BQ08648 103 aa6.81□□□□□ -1.32
HLA-DMB-257ENST00000414017 CDPF1Q6NVV7 123 aa6.81□□□□□ -1.32
HLA-DMB-257ENST00000414017 TOMM7Q9P0U1 55 aa6.81□□□□□ -1.32
HLA-DMB-257ENST00000414017 CDKN2A-AS1Q9UH64 79 aa6.81□□□□□ -1.32
HLA-DMB-257ENST00000414017 IGLV4-69A0A075B6H9 119 aa6.8□□□□□ -1.32
HLA-DMB-257ENST00000414017 A0A087WZ39 114 aa6.8□□□□□ -1.32
HLA-DMB-257ENST00000414017 GVQW2A0A096LPI5 108 aaPredicted RBP6.8□□□□□ -1.32
HLA-DMB-257ENST00000414017 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.8□□□□□ -1.32
HLA-DMB-257ENST00000414017 IGHV3-64A0A075B6Q5 118 aa6.79□□□□□ -1.32
HLA-DMB-257ENST00000414017 S100A6P06703 90 aa6.79□□□□□ -1.32
HLA-DMB-257ENST00000414017 PRSS2P07478 247 aa6.79□□□□□ -1.32
HLA-DMB-257ENST00000414017 SPINK8P0C7L1 97 aa6.79□□□□□ -1.32
HLA-DMB-257ENST00000414017 KRTAP10-1P60331 282 aa6.79□□□□□ -1.32
HLA-DMB-257ENST00000414017 TMEM170BQ5T4T1 132 aa6.79□□□□□ -1.32
HLA-DMB-257ENST00000414017 FAM19A3Q7Z5A8 133 aa6.79□□□□□ -1.32
HLA-DMB-257ENST00000414017 CAMK2N2Q96S95 79 aa6.79□□□□□ -1.32
HLA-DMB-257ENST00000414017 MAP1LC3CQ9BXW4 147 aa6.79□□□□□ -1.32
HLA-DMB-257ENST00000414017 DNAH8Q96JB1 4490 aa6.78□□□□□ -1.32
HLA-DMB-257ENST00000414017 TRAV12-1A0A0B4J245 112 aa6.78□□□□□ -1.32
HLA-DMB-257ENST00000414017 C11orf86A6NJI1 115 aa6.78□□□□□ -1.32
HLA-DMB-257ENST00000414017 H3BRM9 83 aa6.78□□□□□ -1.32
HLA-DMB-257ENST00000414017 SLPIP03973 132 aa6.78□□□□□ -1.32
HLA-DMB-257ENST00000414017 IGLC3P0DOY3 106 aa6.78□□□□□ -1.32
HLA-DMB-257ENST00000414017 OR10D4PQ8NGN7 298 aa6.78□□□□□ -1.32
HLA-DMB-257ENST00000414017 CARD19Q96LW7 228 aa6.78□□□□□ -1.32
HLA-DMB-257ENST00000414017 PMCHL2Q9BQD1 86 aa6.78□□□□□ -1.32
HLA-DMB-257ENST00000414017 MRPL35Q9NZE8 188 aaKnown RBP6.78□□□□□ -1.32
HLA-DMB-257ENST00000414017 BIRC6Q9NR09 4857 aa6.78□□□□□ -1.32
HLA-DMB-257ENST00000414017 ZNF22P17026 224 aaPredicted RBP6.77□□□□□ -1.33
HLA-DMB-257ENST00000414017 SYCNQ0VAF6 134 aa6.77□□□□□ -1.33
HLA-DMB-257ENST00000414017 COA6Q5JTJ3 125 aaKnown RBP6.77□□□□□ -1.33
HLA-DMB-257ENST00000414017 F8VRH5 84 aa6.76□□□□□ -1.33
HLA-DMB-257ENST00000414017 S100A2P29034 98 aa6.76□□□□□ -1.33
HLA-DMB-257ENST00000414017 KRTDAPP60985 99 aa6.76□□□□□ -1.33
HLA-DMB-257ENST00000414017 CNBPP62633 177 aaKnown RBP6.76□□□□□ -1.33
HLA-DMB-257ENST00000414017 HAMPP81172 84 aa6.76□□□□□ -1.33
HLA-DMB-257ENST00000414017 C6orf226Q5I0X4 101 aa6.76□□□□□ -1.33
HLA-DMB-257ENST00000414017 Q6ZRU5 148 aa6.76□□□□□ -1.33
HLA-DMB-257ENST00000414017 LINC01561Q8N1V8 128 aa6.76□□□□□ -1.33
HLA-DMB-257ENST00000414017 APOBP04114 4563 aaKnown RBP6.75□□□□□ -1.33
HLA-DMB-257ENST00000414017 IGLV5-45A0A087WSX0 123 aa6.75□□□□□ -1.33
HLA-DMB-257ENST00000414017 SMIM1B2RUZ4 78 aa6.75□□□□□ -1.33
HLA-DMB-257ENST00000414017 NDUFA1O15239 70 aa6.75□□□□□ -1.33
HLA-DMB-257ENST00000414017 CKS1BP61024 79 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms