RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 BRI3O95415 125 aa10.02□□□□□ -0.81
SMARCA4-202ENST00000413806 C4orf48Q5BLP8 95 aa10.02□□□□□ -0.81
SMARCA4-202ENST00000413806 LINC00482Q8N8I6 264 aa10.02□□□□□ -0.81
SMARCA4-202ENST00000413806 HCFC1P51610 2035 aa10.02□□□□□ -0.81
SMARCA4-202ENST00000413806 TNCP24821 2201 aa10.02□□□□□ -0.81
SMARCA4-202ENST00000413806 FAM208BQ5VWN6 2430 aa10.02□□□□□ -0.81
SMARCA4-202ENST00000413806 ATRXP46100 2492 aa10.02□□□□□ -0.81
SMARCA4-202ENST00000413806 IGKV2-24A0A0C4DH68 120 aa10.02□□□□□ -0.81
SMARCA4-202ENST00000413806 LINC00959A0A1B0GUT2 108 aa10.02□□□□□ -0.81
SMARCA4-202ENST00000413806 INAFM1C9JVW0 142 aa10.02□□□□□ -0.81
SMARCA4-202ENST00000413806 COX17Q14061 63 aa10.02□□□□□ -0.81
SMARCA4-202ENST00000413806 SYCNQ0VAF6 134 aa10.01□□□□□ -0.81
SMARCA4-202ENST00000413806 HIGD2AQ9BW72 106 aa10.01□□□□□ -0.81
SMARCA4-202ENST00000413806 LELP1Q5T871 98 aa10.01□□□□□ -0.81
SMARCA4-202ENST00000413806 CELA1Q9UNI1 258 aa10.01□□□□□ -0.81
SMARCA4-202ENST00000413806 BDP1A6H8Y1 2624 aa10.01□□□□□ -0.81
SMARCA4-202ENST00000413806 C18orf65Q6ZTR6 163 aa10□□□□□ -0.81
SMARCA4-202ENST00000413806 DSCAMO60469 2012 aa10□□□□□ -0.81
SMARCA4-202ENST00000413806 NANOS2P60321 138 aaKnown RBP10□□□□□ -0.81
SMARCA4-202ENST00000413806 TRBV7-6A0A0J9YX20 115 aa10□□□□□ -0.81
SMARCA4-202ENST00000413806 FAM19A1Q7Z5A9 133 aa10□□□□□ -0.81
SMARCA4-202ENST00000413806 POM121L12Q8N7R1 296 aa9.99□□□□□ -0.81
SMARCA4-202ENST00000413806 ZNF580Q9UK33 172 aa9.99□□□□□ -0.81
SMARCA4-202ENST00000413806 M0R378 163 aa9.99□□□□□ -0.81
SMARCA4-202ENST00000413806 CDC42SE2Q9NRR3 84 aa9.99□□□□□ -0.81
SMARCA4-202ENST00000413806 XAGE1AQ9HD64 81 aa9.98□□□□□ -0.81
SMARCA4-202ENST00000413806 TRAV10A0A0B4J240 114 aa9.98□□□□□ -0.81
SMARCA4-202ENST00000413806 Q8IZM0 81 aa9.98□□□□□ -0.81
SMARCA4-202ENST00000413806 CDSNQ15517 529 aa9.98□□□□□ -0.81
SMARCA4-202ENST00000413806 A0A096LNI7 61 aa9.97□□□□□ -0.81
SMARCA4-202ENST00000413806 LOC100131303A0A0U1RQF7 123 aa9.97□□□□□ -0.81
SMARCA4-202ENST00000413806 TRBV7-7A0A0K0K1E9 115 aa9.97□□□□□ -0.81
SMARCA4-202ENST00000413806 C4orf26Q17RF5 130 aa9.97□□□□□ -0.81
SMARCA4-202ENST00000413806 DHRS4-AS1Q9P1J3 65 aa9.97□□□□□ -0.81
SMARCA4-202ENST00000413806 CPAMD8Q8IZJ3 1885 aa9.96□□□□□ -0.81
SMARCA4-202ENST00000413806 LY6G6DO95868 133 aa9.96□□□□□ -0.81
SMARCA4-202ENST00000413806 NTM-AS1Q6ZSK4 140 aa9.96□□□□□ -0.82
SMARCA4-202ENST00000413806 IGLV4-69A0A075B6H9 119 aa9.96□□□□□ -0.82
SMARCA4-202ENST00000413806 PTPRQQ9UMZ3 2332 aa9.95□□□□□ -0.82
SMARCA4-202ENST00000413806 DSCAML1Q8TD84 2053 aa9.94□□□□□ -0.82
SMARCA4-202ENST00000413806 AVPP01185 164 aa9.94□□□□□ -0.82
SMARCA4-202ENST00000413806 KPRPQ5T749 579 aaPredicted RBP9.93□□□□□ -0.82
SMARCA4-202ENST00000413806 LINC00242Q5T6M2 205 aa9.93□□□□□ -0.82
SMARCA4-202ENST00000413806 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.93□□□□□ -0.82
SMARCA4-202ENST00000413806 HIVEP2P31629 2446 aa9.93□□□□□ -0.82
SMARCA4-202ENST00000413806 A0A087WYN8 130 aa9.93□□□□□ -0.82
SMARCA4-202ENST00000413806 ODF3L2Q3SX64 289 aa9.92□□□□□ -0.82
SMARCA4-202ENST00000413806 Q8N3U1 123 aa9.92□□□□□ -0.82
SMARCA4-202ENST00000413806 CHCHD7Q9BUK0 85 aa9.92□□□□□ -0.82
SMARCA4-202ENST00000413806 A0A087WZ39 114 aa9.92□□□□□ -0.82
SMARCA4-202ENST00000413806 PRM2P04554 102 aa9.92□□□□□ -0.82
SMARCA4-202ENST00000413806 PRR14LQ5THK1 2151 aa9.91□□□□□ -0.82
SMARCA4-202ENST00000413806 TSPEAR-AS2P59090 65 aa9.91□□□□□ -0.82
SMARCA4-202ENST00000413806 LINC00208Q96KT6 92 aa9.91□□□□□ -0.82
SMARCA4-202ENST00000413806 RPL28P46779 137 aaKnown RBP9.91□□□□□ -0.82
SMARCA4-202ENST00000413806 RPS28P62857 69 aaKnown RBP9.91□□□□□ -0.82
SMARCA4-202ENST00000413806 EDN2P20800 178 aa9.9□□□□□ -0.82
SMARCA4-202ENST00000413806 Q8N814 137 aa9.9□□□□□ -0.82
SMARCA4-202ENST00000413806 CRYGAP11844 174 aa9.9□□□□□ -0.82
SMARCA4-202ENST00000413806 ESRGQ1W209 222 aa9.9□□□□□ -0.82
SMARCA4-202ENST00000413806 NOTCH2Q04721 2471 aa9.9□□□□□ -0.82
SMARCA4-202ENST00000413806 SMIM1B2RUZ4 78 aa9.9□□□□□ -0.82
SMARCA4-202ENST00000413806 IGHV4-30-4P0DP06 118 aa9.9□□□□□ -0.82
SMARCA4-202ENST00000413806 TMEM254Q8TBM7 123 aa9.9□□□□□ -0.82
SMARCA4-202ENST00000413806 ZNF73O43830 326 aaPredicted RBP9.9□□□□□ -0.83
SMARCA4-202ENST00000413806 AMELXQ99217 191 aa9.9□□□□□ -0.83
SMARCA4-202ENST00000413806 IGLV2-18A0A075B6J9 118 aa9.89□□□□□ -0.83
SMARCA4-202ENST00000413806 BEAN1Q3B7T3 259 aa9.89□□□□□ -0.83
SMARCA4-202ENST00000413806 OTOGLQ3ZCN5 2332 aa9.89□□□□□ -0.83
SMARCA4-202ENST00000413806 A0A096LNJ9 63 aa9.89□□□□□ -0.83
SMARCA4-202ENST00000413806 SERTAD4-AS1Q5TG53 156 aa9.89□□□□□ -0.83
SMARCA4-202ENST00000413806 ACACBO00763 2458 aa9.88□□□□□ -0.83
SMARCA4-202ENST00000413806 IGKV2-28A0A075B6P5 120 aa9.88□□□□□ -0.83
SMARCA4-202ENST00000413806 IGKV2D-28P01615 120 aa9.88□□□□□ -0.83
SMARCA4-202ENST00000413806 TANC2Q9HCD6 1990 aa9.88□□□□□ -0.83
SMARCA4-202ENST00000413806 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.87□□□□□ -0.83
SMARCA4-202ENST00000413806 IGLV1-51P01701 117 aa9.87□□□□□ -0.83
SMARCA4-202ENST00000413806 ZNF706Q9Y5V0 76 aaPredicted RBP9.87□□□□□ -0.83
SMARCA4-202ENST00000413806 PLXNB1O43157 2135 aa9.87□□□□□ -0.83
SMARCA4-202ENST00000413806 LINC00846Q9NV44 126 aa9.86□□□□□ -0.83
SMARCA4-202ENST00000413806 VPREB1P12018 145 aa9.86□□□□□ -0.83
SMARCA4-202ENST00000413806 EML5Q05BV3 1969 aa9.85□□□□□ -0.83
SMARCA4-202ENST00000413806 CYSRT1A8MQ03 144 aa9.85□□□□□ -0.83
SMARCA4-202ENST00000413806 ADAMTSL4-AS1Q5T5F5 129 aa9.85□□□□□ -0.83
SMARCA4-202ENST00000413806 C16orf95Q9H693 158 aa9.85□□□□□ -0.83
SMARCA4-202ENST00000413806 SPG11Q96JI7 2443 aa9.85□□□□□ -0.83
SMARCA4-202ENST00000413806 EXPH5Q8NEV8 1989 aa9.84□□□□□ -0.83
SMARCA4-202ENST00000413806 COX6A2Q02221 97 aa9.84□□□□□ -0.83
SMARCA4-202ENST00000413806 EGFEM1PQ0D2K5 195 aa9.84□□□□□ -0.83
SMARCA4-202ENST00000413806 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.84□□□□□ -0.83
SMARCA4-202ENST00000413806 LINC01546A6NGU7 62 aa9.82□□□□□ -0.84
SMARCA4-202ENST00000413806 A0A1W2PPR1 153 aa9.82□□□□□ -0.84
SMARCA4-202ENST00000413806 FHL2Q14192 279 aa9.82□□□□□ -0.84
SMARCA4-202ENST00000413806 CUL9Q8IWT3 2517 aa9.81□□□□□ -0.84
SMARCA4-202ENST00000413806 C7orf33Q8WU49 177 aa9.81□□□□□ -0.84
SMARCA4-202ENST00000413806 LINC00474Q9P2X8 69 aa9.81□□□□□ -0.84
SMARCA4-202ENST00000413806 Q6ZVQ6 151 aa9.8□□□□□ -0.84
SMARCA4-202ENST00000413806 SMCPP49901 116 aaPredicted RBP9.8□□□□□ -0.84
SMARCA4-202ENST00000413806 LINC01547P58512 204 aaPredicted RBP9.8□□□□□ -0.84
SMARCA4-202ENST00000413806 LIMD2Q9BT23 127 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms