RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 MIFP14174 115 aa3.77□□□□□ -1.81
LINC00342-201ENST00000412393 HLA-DMBP28068 263 aa3.77□□□□□ -1.81
LINC00342-201ENST00000412393 XGP55808 180 aa3.77□□□□□ -1.81
LINC00342-201ENST00000412393 TTC32Q5I0X7 151 aa3.77□□□□□ -1.81
LINC00342-201ENST00000412393 Q8NAQ8 132 aa3.77□□□□□ -1.81
LINC00342-201ENST00000412393 IGKV3D-20A0A0C4DH25 116 aa3.76□□□□□ -1.81
LINC00342-201ENST00000412393 A0A0J9YX75 114 aa3.76□□□□□ -1.81
LINC00342-201ENST00000412393 A8MWV9 139 aa3.76□□□□□ -1.81
LINC00342-201ENST00000412393 H3BMM0 161 aa3.76□□□□□ -1.81
LINC00342-201ENST00000412393 RBMY1A1P0DJD3 496 aaKnown RBP3.76□□□□□ -1.81
LINC00342-201ENST00000412393 RBMY1CP0DJD4 496 aa3.76□□□□□ -1.81
LINC00342-201ENST00000412393 SCGB1C2P0DMR2 95 aa3.76□□□□□ -1.81
LINC00342-201ENST00000412393 DEFB1P60022 68 aa3.76□□□□□ -1.81
LINC00342-201ENST00000412393 RBMY1FQ15415 496 aaKnown RBP3.76□□□□□ -1.81
LINC00342-201ENST00000412393 C10orf126Q8N4M7 172 aa3.76□□□□□ -1.81
LINC00342-201ENST00000412393 CSNK1G2-AS1Q8NCQ2 148 aa3.76□□□□□ -1.81
LINC00342-201ENST00000412393 TMEM141Q96I45 108 aa3.76□□□□□ -1.81
LINC00342-201ENST00000412393 SMIM2Q9BVW6 85 aa3.76□□□□□ -1.81
LINC00342-201ENST00000412393 IMUPQ9GZP8 106 aa3.76□□□□□ -1.81
LINC00342-201ENST00000412393 MSRB1Q9NZV6 116 aa3.76□□□□□ -1.81
LINC00342-201ENST00000412393 XCL2Q9UBD3 114 aa3.76□□□□□ -1.81
LINC00342-201ENST00000412393 A0A0B4J2C4 111 aa3.75□□□□□ -1.81
LINC00342-201ENST00000412393 A0A0J9YY99 117 aa3.75□□□□□ -1.81
LINC00342-201ENST00000412393 C11orf86A6NJI1 115 aa3.75□□□□□ -1.81
LINC00342-201ENST00000412393 F8WDY8 70 aa3.75□□□□□ -1.81
LINC00342-201ENST00000412393 SMKR1H3BMG3 65 aa3.75□□□□□ -1.81
LINC00342-201ENST00000412393 H3BTX0 84 aa3.75□□□□□ -1.81
LINC00342-201ENST00000412393 SOCS3O14543 225 aa3.75□□□□□ -1.81
LINC00342-201ENST00000412393 NXPH4O95158 308 aa3.75□□□□□ -1.81
LINC00342-201ENST00000412393 IGHV3-30P01768 117 aa3.75□□□□□ -1.81
LINC00342-201ENST00000412393 ORM1P02763 201 aa3.75□□□□□ -1.81
LINC00342-201ENST00000412393 IGHV3-30-5P0DP03 117 aa3.75□□□□□ -1.81
LINC00342-201ENST00000412393 FXYD7P58549 80 aa3.75□□□□□ -1.81
LINC00342-201ENST00000412393 RPS28P62857 69 aaKnown RBP3.75□□□□□ -1.81
LINC00342-201ENST00000412393 AMTNQ6UX39 209 aa3.75□□□□□ -1.81
LINC00342-201ENST00000412393 TIMM17AQ99595 171 aa3.75□□□□□ -1.81
LINC00342-201ENST00000412393 TTTY13Q9BZ97 58 aa3.75□□□□□ -1.81
LINC00342-201ENST00000412393 PRO1854Q9UHT4 67 aa3.75□□□□□ -1.81
LINC00342-201ENST00000412393 VPS13DQ5THJ4 4388 aa3.75□□□□□ -1.81
LINC00342-201ENST00000412393 BIRC6Q9NR09 4857 aa3.75□□□□□ -1.81
LINC00342-201ENST00000412393 IGHV3OR16-12A0A075B7B8 117 aa3.74□□□□□ -1.81
LINC00342-201ENST00000412393 TRAV10A0A0B4J240 114 aa3.74□□□□□ -1.81
LINC00342-201ENST00000412393 TRBV6-5A0A0K0K1A5 114 aa3.74□□□□□ -1.81
LINC00342-201ENST00000412393 TRBV30A0A0K0K1B3 111 aa3.74□□□□□ -1.81
LINC00342-201ENST00000412393 IGIPA6NJ69 53 aa3.74□□□□□ -1.81
LINC00342-201ENST00000412393 F6UB75 175 aa3.74□□□□□ -1.81
LINC00342-201ENST00000412393 CRYGDP07320 174 aa3.74□□□□□ -1.81
LINC00342-201ENST00000412393 CFC1BP0CG36 223 aa3.74□□□□□ -1.81
LINC00342-201ENST00000412393 CFC1P0CG37 223 aa3.74□□□□□ -1.81
LINC00342-201ENST00000412393 POLR2KP53803 58 aaKnown RBP3.74□□□□□ -1.81
LINC00342-201ENST00000412393 SUMO2P61956 95 aaKnown RBP3.74□□□□□ -1.81
LINC00342-201ENST00000412393 ZFP2Q6ZN57 461 aa3.74□□□□□ -1.81
LINC00342-201ENST00000412393 ZNRF2Q8NHG8 242 aa3.74□□□□□ -1.81
LINC00342-201ENST00000412393 BAALCQ8WXS3 180 aa3.74□□□□□ -1.81
LINC00342-201ENST00000412393 RASL10AQ92737 203 aa3.74□□□□□ -1.81
LINC00342-201ENST00000412393 LINC00477Q96M19 166 aa3.74□□□□□ -1.81
LINC00342-201ENST00000412393 SCGB3A1Q96QR1 104 aa3.74□□□□□ -1.81
LINC00342-201ENST00000412393 AMELXQ99217 191 aa3.74□□□□□ -1.81
LINC00342-201ENST00000412393 PRADC1Q9BSG0 188 aa3.74□□□□□ -1.81
LINC00342-201ENST00000412393 AGPAT4-IT1Q9H0P7 198 aa3.74□□□□□ -1.81
LINC00342-201ENST00000412393 PPDPFQ9H3Y8 114 aa3.74□□□□□ -1.81
LINC00342-201ENST00000412393 CELA1Q9UNI1 258 aa3.74□□□□□ -1.81
LINC00342-201ENST00000412393 TIMM8BQ9Y5J9 83 aaPredicted RBP3.74□□□□□ -1.81
LINC00342-201ENST00000412393 EPPK1P58107 5090 aaKnown RBP3.74□□□□□ -1.81
LINC00342-201ENST00000412393 DNAH6Q9C0G6 4158 aa3.73□□□□□ -1.81
LINC00342-201ENST00000412393 IGKV2-40A0A087WW87 121 aaPredicted RBP3.73□□□□□ -1.81
LINC00342-201ENST00000412393 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.73□□□□□ -1.81
LINC00342-201ENST00000412393 SDHAF1A6NFY7 115 aa3.73□□□□□ -1.81
LINC00342-201ENST00000412393 DUSP14O95147 198 aaKnown RBP3.73□□□□□ -1.81
LINC00342-201ENST00000412393 TCL1BO95988 128 aa3.73□□□□□ -1.81
LINC00342-201ENST00000412393 IGKV2D-40P01614 121 aaPredicted RBP3.73□□□□□ -1.81
LINC00342-201ENST00000412393 IGHV3-33P01772 117 aa3.73□□□□□ -1.81
LINC00342-201ENST00000412393 ACYP1P07311 99 aa3.73□□□□□ -1.81
LINC00342-201ENST00000412393 HERVK_113P61574 105 aa3.73□□□□□ -1.81
LINC00342-201ENST00000412393 PMVKQ15126 192 aa3.73□□□□□ -1.81
LINC00342-201ENST00000412393 MEIG1Q5JSS6 88 aa3.73□□□□□ -1.81
LINC00342-201ENST00000412393 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.73□□□□□ -1.81
LINC00342-201ENST00000412393 SDIM1Q6ZPB5 146 aa3.73□□□□□ -1.81
LINC00342-201ENST00000412393 FAM19A4Q96LR4 140 aa3.73□□□□□ -1.81
LINC00342-201ENST00000412393 APLNQ9ULZ1 77 aa3.73□□□□□ -1.81
LINC00342-201ENST00000412393 KIF25-AS1Q9Y6Z4 181 aa3.73□□□□□ -1.81
LINC00342-201ENST00000412393 DNAH10Q8IVF4 4471 aa3.73□□□□□ -1.81
LINC00342-201ENST00000412393 KMT2AQ03164 3969 aa3.72□□□□□ -1.81
LINC00342-201ENST00000412393 IGLV4-69A0A075B6H9 119 aa3.72□□□□□ -1.81
LINC00342-201ENST00000412393 TMSB15BA0A087X1C1 80 aa3.72□□□□□ -1.81
LINC00342-201ENST00000412393 DEFB131BA0A096LNP1 70 aa3.72□□□□□ -1.81
LINC00342-201ENST00000412393 TRAV8-2A0A0B4J237 113 aa3.72□□□□□ -1.81
LINC00342-201ENST00000412393 IGLV5-39A0A0G2JS06 123 aa3.72□□□□□ -1.81
LINC00342-201ENST00000412393 TRBV27A0A0K0K1C4 114 aa3.72□□□□□ -1.81
LINC00342-201ENST00000412393 TRBV7-7A0A0K0K1E9 115 aa3.72□□□□□ -1.81
LINC00342-201ENST00000412393 ZNF815PA8K554 130 aa3.72□□□□□ -1.81
LINC00342-201ENST00000412393 A8MTW9 85 aa3.72□□□□□ -1.81
LINC00342-201ENST00000412393 H3BT86 120 aa3.72□□□□□ -1.81
LINC00342-201ENST00000412393 CCDC179H3BU77 68 aa3.72□□□□□ -1.81
LINC00342-201ENST00000412393 VCYO14598 125 aa3.72□□□□□ -1.81
LINC00342-201ENST00000412393 SLC25A20O43772 301 aa3.72□□□□□ -1.81
LINC00342-201ENST00000412393 SPART-AS1P0CW21 52 aa3.72□□□□□ -1.81
LINC00342-201ENST00000412393 GATA1P15976 413 aaPredicted RBP3.72□□□□□ -1.81
LINC00342-201ENST00000412393 PSMB2P49721 201 aa3.72□□□□□ -1.81
LINC00342-201ENST00000412393 EMP1P54849 157 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms