RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 Q6ZQT0 140 aa3.58□□□□□ -1.84
HERC4-205ENST00000412272 ZNF843Q8N446 348 aa3.58□□□□□ -1.84
HERC4-205ENST00000412272 SMIM11BQ8TCY0 68 aa3.58□□□□□ -1.84
HERC4-205ENST00000412272 IGHV6-1A0A0B4J1U7 121 aa3.58□□□□□ -1.84
HERC4-205ENST00000412272 GNLYP22749 145 aa3.58□□□□□ -1.84
HERC4-205ENST00000412272 CHCHD7Q9BUK0 85 aa3.57□□□□□ -1.84
HERC4-205ENST00000412272 NBPF19A0A087WUL8 3843 aa3.57□□□□□ -1.84
HERC4-205ENST00000412272 IGKV2-28A0A075B6P5 120 aa3.57□□□□□ -1.84
HERC4-205ENST00000412272 IGKV2D-28P01615 120 aa3.57□□□□□ -1.84
HERC4-205ENST00000412272 C9orf66Q5T8R8 295 aa3.57□□□□□ -1.84
HERC4-205ENST00000412272 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.57□□□□□ -1.84
HERC4-205ENST00000412272 ODF3BA8MYP8 253 aa3.57□□□□□ -1.84
HERC4-205ENST00000412272 H3BQ85 93 aa3.57□□□□□ -1.84
HERC4-205ENST00000412272 APELAP0DMC3 54 aa3.57□□□□□ -1.84
HERC4-205ENST00000412272 NANOS2P60321 138 aaKnown RBP3.57□□□□□ -1.84
HERC4-205ENST00000412272 RPL36AP83881 106 aaKnown RBP3.57□□□□□ -1.84
HERC4-205ENST00000412272 IGHV3-16A0A0C4DH30 117 aa3.56□□□□□ -1.84
HERC4-205ENST00000412272 RELNP78509 3460 aa3.56□□□□□ -1.84
HERC4-205ENST00000412272 BSNQ9UPA5 3926 aa3.56□□□□□ -1.84
HERC4-205ENST00000412272 LMO4P61968 165 aa3.56□□□□□ -1.84
HERC4-205ENST00000412272 IGHV3-72A0A0B4J1Y9 119 aa3.56□□□□□ -1.84
HERC4-205ENST00000412272 IGHV3OR16-9A0A0B4J2B5 98 aa3.56□□□□□ -1.84
HERC4-205ENST00000412272 CRPP02741 224 aa3.56□□□□□ -1.84
HERC4-205ENST00000412272 PRB3Q04118 309 aaPredicted RBP3.56□□□□□ -1.84
HERC4-205ENST00000412272 LINC00476Q8WZB0 136 aa3.56□□□□□ -1.84
HERC4-205ENST00000412272 CFAP47Q6ZTR5 3102 aa3.56□□□□□ -1.84
HERC4-205ENST00000412272 IGLV1-51P01701 117 aa3.55□□□□□ -1.84
HERC4-205ENST00000412272 PDE6GP18545 87 aa3.55□□□□□ -1.84
HERC4-205ENST00000412272 KIAA0100Q14667 2235 aaKnown RBP3.55□□□□□ -1.84
HERC4-205ENST00000412272 LAMA5O15230 3695 aa3.55□□□□□ -1.84
HERC4-205ENST00000412272 SMIM1B2RUZ4 78 aa3.55□□□□□ -1.84
HERC4-205ENST00000412272 S4R3C0 116 aa3.55□□□□□ -1.84
HERC4-205ENST00000412272 NBEAQ8NFP9 2946 aa3.55□□□□□ -1.84
HERC4-205ENST00000412272 SPEGQ15772 3267 aa3.55□□□□□ -1.84
HERC4-205ENST00000412272 FSHBP01225 129 aa3.55□□□□□ -1.84
HERC4-205ENST00000412272 FBXL19-AS1Q494R0 122 aa3.55□□□□□ -1.84
HERC4-205ENST00000412272 C22orf34Q6ZV56 151 aa3.55□□□□□ -1.84
HERC4-205ENST00000412272 CCL5P13501 91 aa3.54□□□□□ -1.84
HERC4-205ENST00000412272 REG3AQ06141 175 aa3.54□□□□□ -1.84
HERC4-205ENST00000412272 CDKN2A-AS1Q9UH64 79 aa3.54□□□□□ -1.84
HERC4-205ENST00000412272 K7EQD1 137 aa3.54□□□□□ -1.84
HERC4-205ENST00000412272 BSPH1Q075Z2 132 aa3.54□□□□□ -1.84
HERC4-205ENST00000412272 LYPD2Q6UXB3 125 aa3.54□□□□□ -1.84
HERC4-205ENST00000412272 DEFB108BQ8NET1 73 aa3.54□□□□□ -1.84
HERC4-205ENST00000412272 RETNLBQ9BQ08 111 aa3.54□□□□□ -1.84
HERC4-205ENST00000412272 LINC01565O15544 149 aa3.54□□□□□ -1.84
HERC4-205ENST00000412272 SCXQ7RTU7 201 aa3.54□□□□□ -1.84
HERC4-205ENST00000412272 IGHV4-31P0DP07 118 aa3.53□□□□□ -1.84
HERC4-205ENST00000412272 IGHV4-38-2P0DP08 117 aa3.53□□□□□ -1.84
HERC4-205ENST00000412272 LINC00612Q8N6U2 182 aa3.53□□□□□ -1.84
HERC4-205ENST00000412272 IGKV4-1P06312 121 aa3.53□□□□□ -1.84
HERC4-205ENST00000412272 ASB16-AS1Q495Z4 193 aa3.53□□□□□ -1.84
HERC4-205ENST00000412272 FAM30AQ9NZY2 134 aa3.53□□□□□ -1.84
HERC4-205ENST00000412272 CELA1Q9UNI1 258 aa3.53□□□□□ -1.84
HERC4-205ENST00000412272 LINC00242Q5T6M2 205 aa3.53□□□□□ -1.84
HERC4-205ENST00000412272 DEFB132Q7Z7B7 95 aa3.53□□□□□ -1.84
HERC4-205ENST00000412272 Q8N814 137 aa3.53□□□□□ -1.84
HERC4-205ENST00000412272 IGHV7-81A0A0B4J1V7 117 aa3.52□□□□□ -1.85
HERC4-205ENST00000412272 DEFB119Q8N690 84 aa3.52□□□□□ -1.85
HERC4-205ENST00000412272 DPM3Q9P2X0 92 aa3.52□□□□□ -1.85
HERC4-205ENST00000412272 Q8NAQ8 132 aa3.52□□□□□ -1.85
HERC4-205ENST00000412272 IGLV4-60A0A075B6I1 120 aa3.52□□□□□ -1.85
HERC4-205ENST00000412272 MINOS1Q5TGZ0 78 aa3.52□□□□□ -1.85
HERC4-205ENST00000412272 LINC01006Q8NI28 216 aa3.52□□□□□ -1.85
HERC4-205ENST00000412272 PLAC8Q9NZF1 115 aa3.52□□□□□ -1.85
HERC4-205ENST00000412272 TRBV6-4A0A1B0GX49 114 aa3.52□□□□□ -1.85
HERC4-205ENST00000412272 F5H697 171 aa3.52□□□□□ -1.85
HERC4-205ENST00000412272 NDUFA4O00483 81 aa3.52□□□□□ -1.85
HERC4-205ENST00000412272 COX6A2Q02221 97 aa3.52□□□□□ -1.85
HERC4-205ENST00000412272 PRR4Q16378 134 aa3.52□□□□□ -1.85
HERC4-205ENST00000412272 DEFB114Q30KQ6 69 aa3.52□□□□□ -1.85
HERC4-205ENST00000412272 LINC00467Q9BRT7 94 aa3.52□□□□□ -1.85
HERC4-205ENST00000412272 SND1-IT1Q9HBX3 110 aa3.51□□□□□ -1.85
HERC4-205ENST00000412272 WDR87Q6ZQQ6 2873 aa3.51□□□□□ -1.85
HERC4-205ENST00000412272 SORL1Q92673 2214 aa3.51□□□□□ -1.85
HERC4-205ENST00000412272 IGHV3OR16-12A0A075B7B8 117 aa3.51□□□□□ -1.85
HERC4-205ENST00000412272 A0A087X002 238 aa3.51□□□□□ -1.85
HERC4-205ENST00000412272 CHCHD10Q8WYQ3 142 aaPredicted RBP3.51□□□□□ -1.85
HERC4-205ENST00000412272 Q9BRP9 147 aa3.51□□□□□ -1.85
HERC4-205ENST00000412272 MAP6D1Q9H9H5 199 aa3.51□□□□□ -1.85
HERC4-205ENST00000412272 A0A096LNT2 108 aa3.51□□□□□ -1.85
HERC4-205ENST00000412272 PRB2P02812 416 aaPredicted RBP3.51□□□□□ -1.85
HERC4-205ENST00000412272 ELOF1P60002 83 aaKnown RBP3.51□□□□□ -1.85
HERC4-205ENST00000412272 CASC2Q6XLA1 102 aa3.51□□□□□ -1.85
HERC4-205ENST00000412272 MINOS1-NBL1R4GNA1 71 aa3.51□□□□□ -1.85
HERC4-205ENST00000412272 FRYLO94915 3013 aa3.5□□□□□ -1.85
HERC4-205ENST00000412272 IGHV3-35A0A0C4DH35 117 aa3.5□□□□□ -1.85
HERC4-205ENST00000412272 RTL8CO15255 209 aa3.5□□□□□ -1.85
HERC4-205ENST00000412272 IGHV3-23P01764 117 aa3.5□□□□□ -1.85
HERC4-205ENST00000412272 NTM-AS1Q6ZSK4 140 aa3.5□□□□□ -1.85
HERC4-205ENST00000412272 CNEP1R1Q8N9A8 125 aa3.5□□□□□ -1.85
HERC4-205ENST00000412272 Q8N9L7 120 aa3.5□□□□□ -1.85
HERC4-205ENST00000412272 Q8N9W7 124 aa3.5□□□□□ -1.85
HERC4-205ENST00000412272 ZNF702PQ9H963 129 aa3.5□□□□□ -1.85
HERC4-205ENST00000412272 CACNA1GO43497 2377 aa3.5□□□□□ -1.85
HERC4-205ENST00000412272 IGHV3-49A0A0A0MS15 119 aa3.5□□□□□ -1.85
HERC4-205ENST00000412272 A8MTW9 85 aa3.5□□□□□ -1.85
HERC4-205ENST00000412272 HIGD2BQ4VC39 106 aa3.5□□□□□ -1.85
HERC4-205ENST00000412272 H3BUA1 57 aa3.49□□□□□ -1.85
HERC4-205ENST00000412272 SPINK7P58062 85 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms