RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 C3orf79P0CE67 100 aa12.48□□□□□ -0.41
CDC42-204ENST00000411827 IGLC3P0DOY3 106 aa12.48□□□□□ -0.41
CDC42-204ENST00000411827 KRTDAPP60985 99 aa12.48□□□□□ -0.41
CDC42-204ENST00000411827 ODF1Q14990 250 aa12.48□□□□□ -0.41
CDC42-204ENST00000411827 LINC01561Q8N1V8 128 aa12.48□□□□□ -0.41
CDC42-204ENST00000411827 XCL1P47992 114 aa12.47□□□□□ -0.41
CDC42-204ENST00000411827 ALMS1Q8TCU4 4167 aa12.47□□□□□ -0.41
CDC42-204ENST00000411827 VPS13DQ5THJ4 4388 aa12.46□□□□□ -0.41
CDC42-204ENST00000411827 IGLV10-54A0A075B6I4 117 aa12.46□□□□□ -0.41
CDC42-204ENST00000411827 IGHV3OR16-9A0A0B4J2B5 98 aa12.46□□□□□ -0.41
CDC42-204ENST00000411827 H3BRM9 83 aa12.46□□□□□ -0.41
CDC42-204ENST00000411827 COX7A2LO14548 114 aa12.46□□□□□ -0.41
CDC42-204ENST00000411827 PSCAO43653 123 aa12.46□□□□□ -0.41
CDC42-204ENST00000411827 ZC2HC1BQ5TFG8 222 aa12.46□□□□□ -0.41
CDC42-204ENST00000411827 LINC01545Q5VT33 79 aa12.46□□□□□ -0.41
CDC42-204ENST00000411827 IGLV5-45A0A087WSX0 123 aa12.45□□□□□ -0.42
CDC42-204ENST00000411827 A0A0J9YXV3 536 aa12.45□□□□□ -0.42
CDC42-204ENST00000411827 DPM2O94777 84 aa12.45□□□□□ -0.42
CDC42-204ENST00000411827 CFAP161Q6P656 301 aa12.45□□□□□ -0.42
CDC42-204ENST00000411827 MRPL35Q9NZE8 188 aaKnown RBP12.45□□□□□ -0.42
CDC42-204ENST00000411827 A0A087WZ39 114 aa12.44□□□□□ -0.42
CDC42-204ENST00000411827 GAGE12HA6NDE8 117 aa12.44□□□□□ -0.42
CDC42-204ENST00000411827 H0Y8G0 127 aa12.44□□□□□ -0.42
CDC42-204ENST00000411827 FOXI1Q12951 378 aa12.44□□□□□ -0.42
CDC42-204ENST00000411827 KRTAP26-1Q6PEX3 210 aa12.44□□□□□ -0.42
CDC42-204ENST00000411827 CHAC1Q9BUX1 264 aa12.44□□□□□ -0.42
CDC42-204ENST00000411827 IGLV4-69A0A075B6H9 119 aa12.43□□□□□ -0.42
CDC42-204ENST00000411827 APOMO95445 188 aa12.43□□□□□ -0.42
CDC42-204ENST00000411827 OR10D4PQ8NGN7 298 aa12.43□□□□□ -0.42
CDC42-204ENST00000411827 MALP21145 153 aa12.42□□□□□ -0.42
CDC42-204ENST00000411827 Q6ZRN7 208 aaPredicted RBP12.42□□□□□ -0.42
CDC42-204ENST00000411827 LINC00469Q8N7U9 141 aa12.42□□□□□ -0.42
CDC42-204ENST00000411827 IGKCP01834 107 aa12.41□□□□□ -0.42
CDC42-204ENST00000411827 C14orf177Q52M58 125 aa12.41□□□□□ -0.42
CDC42-204ENST00000411827 CDKN2A-AS1Q9UH64 79 aa12.4□□□□□ -0.42
CDC42-204ENST00000411827 IGHV1-58A0A0C4DH39 117 aa12.39□□□□□ -0.43
CDC42-204ENST00000411827 C11orf86A6NJI1 115 aa12.39□□□□□ -0.43
CDC42-204ENST00000411827 COX6A2Q02221 97 aa12.39□□□□□ -0.43
CDC42-204ENST00000411827 ZNF22P17026 224 aaPredicted RBP12.38□□□□□ -0.43
CDC42-204ENST00000411827 TMEM170BQ5T4T1 132 aa12.38□□□□□ -0.43
CDC42-204ENST00000411827 C5orf38Q86SI9 138 aa12.38□□□□□ -0.43
CDC42-204ENST00000411827 EREGO14944 169 aa12.37□□□□□ -0.43
CDC42-204ENST00000411827 HERVK_113P61574 105 aa12.37□□□□□ -0.43
CDC42-204ENST00000411827 LINC00336Q6ZUF6 198 aa12.37□□□□□ -0.43
CDC42-204ENST00000411827 IGHV3-64A0A075B6Q5 118 aa12.36□□□□□ -0.43
CDC42-204ENST00000411827 F8WDY8 70 aa12.36□□□□□ -0.43
CDC42-204ENST00000411827 SCGB1D1O95968 90 aa12.35□□□□□ -0.43
CDC42-204ENST00000411827 JOSD1Q15040 202 aaPredicted RBP12.34□□□□□ -0.43
CDC42-204ENST00000411827 MAPKAPK5-AS1Q8N8E1 139 aa12.34□□□□□ -0.43
CDC42-204ENST00000411827 PMCHL2Q9BQD1 86 aa12.34□□□□□ -0.43
CDC42-204ENST00000411827 GVQW2A0A096LPI5 108 aaPredicted RBP12.33□□□□□ -0.44
CDC42-204ENST00000411827 TMEM223A0PJW6 202 aa12.33□□□□□ -0.44
CDC42-204ENST00000411827 USP17L23D6RBM5 183 aa12.33□□□□□ -0.44
CDC42-204ENST00000411827 SFTA2Q6UW10 78 aa12.33□□□□□ -0.44
CDC42-204ENST00000411827 DNAH6Q9C0G6 4158 aa12.33□□□□□ -0.44
CDC42-204ENST00000411827 DNAH10Q8IVF4 4471 aa12.33□□□□□ -0.44
CDC42-204ENST00000411827 IGLV5-39A0A0G2JS06 123 aa12.32□□□□□ -0.44
CDC42-204ENST00000411827 SMIM1B2RUZ4 78 aa12.32□□□□□ -0.44
CDC42-204ENST00000411827 ZNF561-AS1K7EIQ3 104 aa12.32□□□□□ -0.44
CDC42-204ENST00000411827 RTL8CO15255 209 aa12.32□□□□□ -0.44
CDC42-204ENST00000411827 KMT2AQ03164 3969 aa12.31□□□□□ -0.44
CDC42-204ENST00000411827 LRCOL1A6NCL2 159 aa12.31□□□□□ -0.44
CDC42-204ENST00000411827 HSBP1L1C9JCN9 74 aa12.31□□□□□ -0.44
CDC42-204ENST00000411827 PRSS2P07478 247 aa12.31□□□□□ -0.44
CDC42-204ENST00000411827 Q8IZM0 81 aa12.31□□□□□ -0.44
CDC42-204ENST00000411827 ORAOV1Q8WV07 137 aa12.31□□□□□ -0.44
CDC42-204ENST00000411827 FRAS1Q86XX4 4008 aa12.3□□□□□ -0.44
CDC42-204ENST00000411827 A0A087WTM6 91 aa12.3□□□□□ -0.44
CDC42-204ENST00000411827 CXCL5P42830 114 aa12.3□□□□□ -0.44
CDC42-204ENST00000411827 C15orf56Q8N910 161 aa12.3□□□□□ -0.44
CDC42-204ENST00000411827 C2orf48Q96LS8 159 aa12.3□□□□□ -0.44
CDC42-204ENST00000411827 SPINK8P0C7L1 97 aa12.29□□□□□ -0.44
CDC42-204ENST00000411827 PLEKHB2Q96CS7 222 aa12.29□□□□□ -0.44
CDC42-204ENST00000411827 E9PLD3 99 aa12.28□□□□□ -0.44
CDC42-204ENST00000411827 SPAG11BQ08648 103 aa12.28□□□□□ -0.44
CDC42-204ENST00000411827 C6orf226Q5I0X4 101 aa12.28□□□□□ -0.44
CDC42-204ENST00000411827 hDV102S1A0JD36 115 aa12.27□□□□□ -0.45
CDC42-204ENST00000411827 COX7B2Q8TF08 81 aa12.27□□□□□ -0.45
CDC42-204ENST00000411827 LEPROTO15243 131 aa12.26□□□□□ -0.45
CDC42-204ENST00000411827 CKS1BP61024 79 aa12.26□□□□□ -0.45
CDC42-204ENST00000411827 Q8N814 137 aa12.26□□□□□ -0.45
CDC42-204ENST00000411827 NTN5Q8WTR8 489 aaPredicted RBP12.26□□□□□ -0.45
CDC42-204ENST00000411827 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.25□□□□□ -0.45
CDC42-204ENST00000411827 NMUP48645 174 aa12.25□□□□□ -0.45
CDC42-204ENST00000411827 KIAA0087Q14695 138 aa12.25□□□□□ -0.45
CDC42-204ENST00000411827 PKIGQ9Y2B9 76 aa12.25□□□□□ -0.45
CDC42-204ENST00000411827 CNBPP62633 177 aaKnown RBP12.24□□□□□ -0.45
CDC42-204ENST00000411827 TOMM7Q9P0U1 55 aa12.24□□□□□ -0.45
CDC42-204ENST00000411827 LECT2O14960 151 aa12.23□□□□□ -0.45
CDC42-204ENST00000411827 NDUFA1O15239 70 aa12.23□□□□□ -0.45
CDC42-204ENST00000411827 TNP2Q05952 138 aa12.23□□□□□ -0.45
CDC42-204ENST00000411827 HIGD2BQ4VC39 106 aa12.23□□□□□ -0.45
CDC42-204ENST00000411827 PYY3Q5JQD4 70 aa12.23□□□□□ -0.45
CDC42-204ENST00000411827 ATOH7Q8N100 152 aa12.23□□□□□ -0.45
CDC42-204ENST00000411827 STPG4Q8N801 248 aa12.23□□□□□ -0.45
CDC42-204ENST00000411827 LOC105371267A0A1B0GV96 52 aa12.22□□□□□ -0.45
CDC42-204ENST00000411827 J3QQQ9 107 aa12.22□□□□□ -0.45
CDC42-204ENST00000411827 RNF151Q2KHN1 245 aa12.22□□□□□ -0.45
CDC42-204ENST00000411827 CAMK2N2Q96S95 79 aa12.22□□□□□ -0.45
CDC42-204ENST00000411827 PGPEP1Q9NXJ5 209 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms