RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 RNASE13Q5GAN3 156 aaKnown RBP10.18□□□□□ -0.78
MRPL55-220ENST00000411464 PRR26Q8N8Z3 221 aa10.18□□□□□ -0.78
MRPL55-220ENST00000411464 ANAPC16Q96DE5 110 aa10.18□□□□□ -0.78
MRPL55-220ENST00000411464 UBE2D4Q9Y2X8 147 aa10.18□□□□□ -0.78
MRPL55-220ENST00000411464 HIGD1CA8MV81 97 aa10.17□□□□□ -0.78
MRPL55-220ENST00000411464 PPP1R17O96001 155 aa10.17□□□□□ -0.78
MRPL55-220ENST00000411464 SPAG11BQ08648 103 aa10.17□□□□□ -0.78
MRPL55-220ENST00000411464 AMN1Q8IY45 258 aa10.17□□□□□ -0.78
MRPL55-220ENST00000411464 KIR2DL4Q99706 377 aa10.17□□□□□ -0.78
MRPL55-220ENST00000411464 A0A087WZ39 114 aa10.16□□□□□ -0.78
MRPL55-220ENST00000411464 SMIM27A0A1W2PRY6 76 aa10.16□□□□□ -0.78
MRPL55-220ENST00000411464 IGLV7-43P04211 117 aa10.16□□□□□ -0.78
MRPL55-220ENST00000411464 SVBPQ8N300 66 aa10.16□□□□□ -0.78
MRPL55-220ENST00000411464 SMKR1H3BMG3 65 aa10.15□□□□□ -0.78
MRPL55-220ENST00000411464 SUMO2P61956 95 aaKnown RBP10.15□□□□□ -0.78
MRPL55-220ENST00000411464 RHEBQ15382 184 aa10.15□□□□□ -0.78
MRPL55-220ENST00000411464 OR10D4PQ8NGN7 298 aa10.15□□□□□ -0.78
MRPL55-220ENST00000411464 TMEM18Q96B42 140 aa10.15□□□□□ -0.78
MRPL55-220ENST00000411464 IMMP2LQ96T52 175 aa10.15□□□□□ -0.78
MRPL55-220ENST00000411464 CTDSP1Q9GZU7 261 aa10.15□□□□□ -0.78
MRPL55-220ENST00000411464 SNAPINO95295 136 aa10.14□□□□□ -0.79
MRPL55-220ENST00000411464 RPS10P5Q9NQ39 176 aa10.14□□□□□ -0.79
MRPL55-220ENST00000411464 NAT8BQ9UHF3 227 aa10.14□□□□□ -0.79
MRPL55-220ENST00000411464 F8WDY8 70 aa10.13□□□□□ -0.79
MRPL55-220ENST00000411464 H0Y9J4 135 aa10.13□□□□□ -0.79
MRPL55-220ENST00000411464 RIGQ13278 110 aa10.13□□□□□ -0.79
MRPL55-220ENST00000411464 Q6ZUT4 128 aa10.13□□□□□ -0.79
MRPL55-220ENST00000411464 TIMM21Q9BVV7 248 aa10.13□□□□□ -0.79
MRPL55-220ENST00000411464 MRPL35Q9NZE8 188 aaKnown RBP10.13□□□□□ -0.79
MRPL55-220ENST00000411464 LPAP08519 4548 aa10.12□□□□□ -0.79
MRPL55-220ENST00000411464 NRACQ8N912 160 aa10.12□□□□□ -0.79
MRPL55-220ENST00000411464 ORAOV1Q8WV07 137 aa10.12□□□□□ -0.79
MRPL55-220ENST00000411464 IGLV1-50A0A075B6I6 118 aa10.11□□□□□ -0.79
MRPL55-220ENST00000411464 NDUFA1O15239 70 aa10.11□□□□□ -0.79
MRPL55-220ENST00000411464 FAM168BA1KXE4 195 aa10.1□□□□□ -0.79
MRPL55-220ENST00000411464 MRPL54Q6P161 138 aaKnown RBP10.09□□□□□ -0.79
MRPL55-220ENST00000411464 FAM19A5Q7Z5A7 132 aaPredicted RBP10.09□□□□□ -0.79
MRPL55-220ENST00000411464 KRTAP11-1Q8IUC1 163 aa10.09□□□□□ -0.79
MRPL55-220ENST00000411464 IGHV3OR16-9A0A0B4J2B5 98 aa10.08□□□□□ -0.8
MRPL55-220ENST00000411464 TCAPO15273 167 aa10.08□□□□□ -0.8
MRPL55-220ENST00000411464 UBE2D1P51668 147 aa10.08□□□□□ -0.8
MRPL55-220ENST00000411464 PRR4Q16378 134 aa10.08□□□□□ -0.8
MRPL55-220ENST00000411464 C10orf25Q5T742 122 aa10.08□□□□□ -0.8
MRPL55-220ENST00000411464 ATP6V1G1O75348 118 aa10.07□□□□□ -0.8
MRPL55-220ENST00000411464 TLX1NBP0CAT3 122 aa10.07□□□□□ -0.8
MRPL55-220ENST00000411464 S100PP25815 95 aa10.07□□□□□ -0.8
MRPL55-220ENST00000411464 GAGE2EQ4V326 116 aa10.07□□□□□ -0.8
MRPL55-220ENST00000411464 UNQ6190/PRO20217Q6UXQ8 127 aa10.07□□□□□ -0.8
MRPL55-220ENST00000411464 C20orf78Q9BR46 151 aa10.07□□□□□ -0.8
MRPL55-220ENST00000411464 GAGE2DQ9UEU5 116 aa10.07□□□□□ -0.8
MRPL55-220ENST00000411464 A0A1B0GXF2 115 aa10.06□□□□□ -0.8
MRPL55-220ENST00000411464 RPL39P62891 51 aaKnown RBP10.06□□□□□ -0.8
MRPL55-220ENST00000411464 UBE2BP63146 152 aa10.06□□□□□ -0.8
MRPL55-220ENST00000411464 MRPL51Q4U2R6 128 aaKnown RBP10.06□□□□□ -0.8
MRPL55-220ENST00000411464 FAM104BQ5XKR9 115 aa10.06□□□□□ -0.8
MRPL55-220ENST00000411464 A0A1B0GW15 77 aa10.05□□□□□ -0.8
MRPL55-220ENST00000411464 KRTAP1-4P0C5Y4 121 aa10.05□□□□□ -0.8
MRPL55-220ENST00000411464 CKS2P33552 79 aa10.05□□□□□ -0.8
MRPL55-220ENST00000411464 RPL13AP40429 203 aaKnown RBP10.05□□□□□ -0.8
MRPL55-220ENST00000411464 HBBP68871 147 aa10.05□□□□□ -0.8
MRPL55-220ENST00000411464 ATP5L2Q7Z4Y8 100 aa10.05□□□□□ -0.8
MRPL55-220ENST00000411464 SPANXA1Q9NS26 97 aa10.05□□□□□ -0.8
MRPL55-220ENST00000411464 C6orf48Q9UBA6 75 aa10.05□□□□□ -0.8
MRPL55-220ENST00000411464 TRBV24-1A0A075B6N3 115 aa10.04□□□□□ -0.8
MRPL55-220ENST00000411464 TRAV9-1A0A075B6T8 112 aa10.04□□□□□ -0.8
MRPL55-220ENST00000411464 IFITM10A6NMD0 228 aa10.04□□□□□ -0.8
MRPL55-220ENST00000411464 M0QXV9 152 aa10.04□□□□□ -0.8
MRPL55-220ENST00000411464 RPL32P62910 135 aaKnown RBP10.04□□□□□ -0.8
MRPL55-220ENST00000411464 S100A8P05109 93 aa10.03□□□□□ -0.8
MRPL55-220ENST00000411464 MRPS36P82909 103 aaKnown RBP10.03□□□□□ -0.8
MRPL55-220ENST00000411464 CBLN2Q8IUK8 224 aa10.03□□□□□ -0.8
MRPL55-220ENST00000411464 FAM104AQ969W3 186 aa10.03□□□□□ -0.8
MRPL55-220ENST00000411464 TGIF2-C20orf24A0A0A6YYL0 155 aa10.02□□□□□ -0.81
MRPL55-220ENST00000411464 A0A0U1RQV1 116 aa10.02□□□□□ -0.81
MRPL55-220ENST00000411464 TNFRSF6BO95407 300 aa10.02□□□□□ -0.81
MRPL55-220ENST00000411464 S100A1P23297 94 aa10.02□□□□□ -0.81
MRPL55-220ENST00000411464 SMCO4Q9NRQ5 59 aa10.02□□□□□ -0.81
MRPL55-220ENST00000411464 KRTAP7-1Q8IUC3 87 aa10.01□□□□□ -0.81
MRPL55-220ENST00000411464 SMIM2Q9BVW6 85 aa10.01□□□□□ -0.81
MRPL55-220ENST00000411464 SCO1O75880 301 aa10□□□□□ -0.81
MRPL55-220ENST00000411464 TRBV30A0A0K0K1B3 111 aa9.99□□□□□ -0.81
MRPL55-220ENST00000411464 NDUFC2-KCTD14E9PQ53 114 aa9.99□□□□□ -0.81
MRPL55-220ENST00000411464 KIAA0087Q14695 138 aa9.99□□□□□ -0.81
MRPL55-220ENST00000411464 TMEM136Q6ZRR5 245 aa9.99□□□□□ -0.81
MRPL55-220ENST00000411464 PACRGQ96M98 296 aaPredicted RBP9.99□□□□□ -0.81
MRPL55-220ENST00000411464 YPEL4Q96NS1 127 aa9.99□□□□□ -0.81
MRPL55-220ENST00000411464 MUC2Q02817 5179 aa9.99□□□□□ -0.81
MRPL55-220ENST00000411464 D6R8Y8 96 aa9.98□□□□□ -0.81
MRPL55-220ENST00000411464 C2orf82Q6UX34 121 aa9.98□□□□□ -0.81
MRPL55-220ENST00000411464 RAB5AP20339 215 aa9.97□□□□□ -0.81
MRPL55-220ENST00000411464 IFI27P40305 119 aaPredicted RBP9.97□□□□□ -0.81
MRPL55-220ENST00000411464 C9orf129Q5T035 196 aaKnown RBP9.96□□□□□ -0.82
MRPL55-220ENST00000411464 LINC00242Q5T6M2 205 aa9.96□□□□□ -0.82
MRPL55-220ENST00000411464 ZNF861PO60384 105 aa9.95□□□□□ -0.82
MRPL55-220ENST00000411464 NPYP01303 97 aa9.95□□□□□ -0.82
MRPL55-220ENST00000411464 COX19Q49B96 90 aa9.95□□□□□ -0.82
MRPL55-220ENST00000411464 GNB1LQ9BYB4 327 aa9.95□□□□□ -0.82
MRPL55-220ENST00000411464 TSPAN13O95857 204 aa9.94□□□□□ -0.82
MRPL55-220ENST00000411464 PPBPP02775 128 aa9.94□□□□□ -0.82
MRPL55-220ENST00000411464 PYGO1Q9Y3Y4 419 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms