RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 C18orf32Q8TCD1 76 aa7.06□□□□□ -1.28
CHMP3-205ENST00000409810 SCGB3A1Q96QR1 104 aa7.06□□□□□ -1.28
CHMP3-205ENST00000409810 AMELXQ99217 191 aa7.06□□□□□ -1.28
CHMP3-205ENST00000409810 SEC11AP67812 179 aa7.05□□□□□ -1.28
CHMP3-205ENST00000409810 ERASQ7Z444 233 aa7.05□□□□□ -1.28
CHMP3-205ENST00000409810 C5orf38Q86SI9 138 aa7.05□□□□□ -1.28
CHMP3-205ENST00000409810 Q8N1X5 172 aa7.05□□□□□ -1.28
CHMP3-205ENST00000409810 FAM30AQ9NZY2 134 aa7.05□□□□□ -1.28
CHMP3-205ENST00000409810 IGHV3OR16-9A0A0B4J2B5 98 aa7.04□□□□□ -1.28
CHMP3-205ENST00000409810 SLPIP03973 132 aa7.04□□□□□ -1.28
CHMP3-205ENST00000409810 LINC00614P0C842 121 aa7.04□□□□□ -1.28
CHMP3-205ENST00000409810 UBE2D1P51668 147 aa7.04□□□□□ -1.28
CHMP3-205ENST00000409810 OR10D4PQ8NGN7 298 aa7.04□□□□□ -1.28
CHMP3-205ENST00000409810 CARD19Q96LW7 228 aa7.04□□□□□ -1.28
CHMP3-205ENST00000409810 HAMPP81172 84 aa7.03□□□□□ -1.28
CHMP3-205ENST00000409810 SPAG11BQ08648 103 aa7.03□□□□□ -1.28
CHMP3-205ENST00000409810 LINC00242Q5T6M2 205 aa7.03□□□□□ -1.28
CHMP3-205ENST00000409810 LINC00173Q6ZV60 143 aa7.03□□□□□ -1.28
CHMP3-205ENST00000409810 CHAC1Q9BUX1 264 aa7.03□□□□□ -1.28
CHMP3-205ENST00000409810 IGLV4-69A0A075B6H9 119 aa7.02□□□□□ -1.29
CHMP3-205ENST00000409810 EPM2AB3EWF7 344 aa7.02□□□□□ -1.29
CHMP3-205ENST00000409810 F8WDY8 70 aa7.02□□□□□ -1.29
CHMP3-205ENST00000409810 HBDP02042 147 aa7.02□□□□□ -1.29
CHMP3-205ENST00000409810 HERVK_113P63121 156 aa7.02□□□□□ -1.29
CHMP3-205ENST00000409810 SYCNQ0VAF6 134 aa7.02□□□□□ -1.29
CHMP3-205ENST00000409810 SDIM1Q6ZPB5 146 aa7.02□□□□□ -1.29
CHMP3-205ENST00000409810 SCXQ7RTU7 201 aa7.02□□□□□ -1.29
CHMP3-205ENST00000409810 FAM19A3Q7Z5A8 133 aa7.02□□□□□ -1.29
CHMP3-205ENST00000409810 ORAOV1Q8WV07 137 aa7.02□□□□□ -1.29
CHMP3-205ENST00000409810 C2orf48Q96LS8 159 aa7.02□□□□□ -1.29
CHMP3-205ENST00000409810 CAMK2N2Q96S95 79 aa7.02□□□□□ -1.29
CHMP3-205ENST00000409810 GEMIN7Q9H840 131 aaKnown RBP7.02□□□□□ -1.29
CHMP3-205ENST00000409810 A0A087WZ39 114 aa7.01□□□□□ -1.29
CHMP3-205ENST00000409810 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.01□□□□□ -1.29
CHMP3-205ENST00000409810 FAM229AH3BQW9 127 aa7.01□□□□□ -1.29
CHMP3-205ENST00000409810 ZC2HC1BQ5TFG8 222 aa7.01□□□□□ -1.29
CHMP3-205ENST00000409810 LINC01561Q8N1V8 128 aa7.01□□□□□ -1.29
CHMP3-205ENST00000409810 CHCHD1Q96BP2 118 aaKnown RBP7.01□□□□□ -1.29
CHMP3-205ENST00000409810 LINC00526Q96FQ7 95 aa7.01□□□□□ -1.29
CHMP3-205ENST00000409810 SMR3BP02814 79 aaPredicted RBP7□□□□□ -1.29
CHMP3-205ENST00000409810 COX6A2Q02221 97 aa7□□□□□ -1.29
CHMP3-205ENST00000409810 PMVKQ15126 192 aa7□□□□□ -1.29
CHMP3-205ENST00000409810 Q5VSD8 79 aa7□□□□□ -1.29
CHMP3-205ENST00000409810 CIRBP-AS1Q8TBR5 109 aa7□□□□□ -1.29
CHMP3-205ENST00000409810 PACRGQ96M98 296 aaPredicted RBP7□□□□□ -1.29
CHMP3-205ENST00000409810 LINC00474Q9P2X8 69 aa7□□□□□ -1.29
CHMP3-205ENST00000409810 NDUFA1O15239 70 aa6.99□□□□□ -1.29
CHMP3-205ENST00000409810 ATP5LO75964 103 aa6.99□□□□□ -1.29
CHMP3-205ENST00000409810 TRGC2P03986 189 aa6.99□□□□□ -1.29
CHMP3-205ENST00000409810 DPH3Q96FX2 82 aa6.99□□□□□ -1.29
CHMP3-205ENST00000409810 URB1-AS1Q96HZ7 61 aa6.99□□□□□ -1.29
CHMP3-205ENST00000409810 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.99□□□□□ -1.29
CHMP3-205ENST00000409810 LOC107984640A0A0U1RRK4 108 aa6.98□□□□□ -1.29
CHMP3-205ENST00000409810 PRSS2P07478 247 aa6.98□□□□□ -1.29
CHMP3-205ENST00000409810 CIRBPQ14011 172 aaKnown RBP6.98□□□□□ -1.29
CHMP3-205ENST00000409810 Q6ZRU5 148 aa6.98□□□□□ -1.29
CHMP3-205ENST00000409810 BAGE3Q86Y29 109 aa6.98□□□□□ -1.29
CHMP3-205ENST00000409810 CST9LQ9H4G1 147 aa6.98□□□□□ -1.29
CHMP3-205ENST00000409810 A0A096LNJ9 63 aa6.97□□□□□ -1.29
CHMP3-205ENST00000409810 IGKV2-24A0A0C4DH68 120 aa6.97□□□□□ -1.29
CHMP3-205ENST00000409810 A0A0J9YXV3 536 aa6.97□□□□□ -1.29
CHMP3-205ENST00000409810 TINCRA0A1B0GVN0 87 aa6.97□□□□□ -1.29
CHMP3-205ENST00000409810 COLCA2A8K830 154 aa6.97□□□□□ -1.29
CHMP3-205ENST00000409810 HSBP1O75506 76 aa6.97□□□□□ -1.29
CHMP3-205ENST00000409810 PLA2G1BP04054 148 aaKnown RBP6.97□□□□□ -1.29
CHMP3-205ENST00000409810 PMCHL1Q16048 86 aa6.97□□□□□ -1.29
CHMP3-205ENST00000409810 RNF151Q2KHN1 245 aa6.97□□□□□ -1.29
CHMP3-205ENST00000409810 LINC00528Q8N1L1 170 aa6.97□□□□□ -1.29
CHMP3-205ENST00000409810 LINC00469Q8N7U9 141 aa6.97□□□□□ -1.29
CHMP3-205ENST00000409810 SPACA4Q8TDM5 124 aa6.97□□□□□ -1.29
CHMP3-205ENST00000409810 MRPL35Q9NZE8 188 aaKnown RBP6.97□□□□□ -1.29
CHMP3-205ENST00000409810 FAT1Q14517 4588 aa6.97□□□□□ -1.29
CHMP3-205ENST00000409810 CHTF8P0CG12 524 aa6.96□□□□□ -1.3
CHMP3-205ENST00000409810 NDUFA6P56556 154 aa6.96□□□□□ -1.3
CHMP3-205ENST00000409810 MAJINQ3KP22 176 aa6.96□□□□□ -1.3
CHMP3-205ENST00000409810 PDZD11Q5EBL8 140 aa6.96□□□□□ -1.3
CHMP3-205ENST00000409810 KRTAP4-5Q9BYR2 181 aa6.96□□□□□ -1.3
CHMP3-205ENST00000409810 CDKN2A-AS1Q9UH64 79 aa6.96□□□□□ -1.3
CHMP3-205ENST00000409810 VPS13BQ7Z7G8 4022 aa6.96□□□□□ -1.3
CHMP3-205ENST00000409810 IGLV5-45A0A087WSX0 123 aa6.95□□□□□ -1.3
CHMP3-205ENST00000409810 A0A087WYN8 130 aa6.95□□□□□ -1.3
CHMP3-205ENST00000409810 A0A096LNI7 61 aa6.95□□□□□ -1.3
CHMP3-205ENST00000409810 H3BRM9 83 aa6.95□□□□□ -1.3
CHMP3-205ENST00000409810 PANO1I0J062 215 aa6.95□□□□□ -1.3
CHMP3-205ENST00000409810 Q8IZM0 81 aa6.95□□□□□ -1.3
CHMP3-205ENST00000409810 KRTAP17-1Q9BYP8 105 aa6.95□□□□□ -1.3
CHMP3-205ENST00000409810 TOMM7Q9P0U1 55 aa6.95□□□□□ -1.3
CHMP3-205ENST00000409810 TRBV30A0A0K0K1B3 111 aa6.94□□□□□ -1.3
CHMP3-205ENST00000409810 IGLC3P0DOY3 106 aa6.94□□□□□ -1.3
CHMP3-205ENST00000409810 CXCL5P42830 114 aa6.94□□□□□ -1.3
CHMP3-205ENST00000409810 PTTG1IPP53801 180 aa6.94□□□□□ -1.3
CHMP3-205ENST00000409810 CKS1BP61024 79 aa6.94□□□□□ -1.3
CHMP3-205ENST00000409810 RPL18AQ02543 176 aaKnown RBP6.94□□□□□ -1.3
CHMP3-205ENST00000409810 GAGE2BQ13066 116 aa6.94□□□□□ -1.3
CHMP3-205ENST00000409810 KIAA0087Q14695 138 aa6.94□□□□□ -1.3
CHMP3-205ENST00000409810 C6orf226Q5I0X4 101 aa6.94□□□□□ -1.3
CHMP3-205ENST00000409810 PLAC8Q9NZF1 115 aa6.94□□□□□ -1.3
CHMP3-205ENST00000409810 SCO1O75880 301 aa6.93□□□□□ -1.3
CHMP3-205ENST00000409810 UNQ6190/PRO20217Q6UXQ8 127 aa6.93□□□□□ -1.3
CHMP3-205ENST00000409810 STPG4Q8N801 248 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms