RNA–Protein interactions for RNA: ENST00000409727.5

CHMP3-204, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,851 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-204ENST00000409727 IGLV10-54A0A075B6I4 117 aa8.49□□□□□ -1.05
CHMP3-204ENST00000409727 XCL1P47992 114 aa8.49□□□□□ -1.05
CHMP3-204ENST00000409727 HNRNPA3P51991 378 aaKnown RBP8.49□□□□□ -1.05
CHMP3-204ENST00000409727 SEC11AP67812 179 aa8.49□□□□□ -1.05
CHMP3-204ENST00000409727 REG3AQ06141 175 aa8.49□□□□□ -1.05
CHMP3-204ENST00000409727 MAPKAPK5-AS1Q8N8E1 139 aa8.49□□□□□ -1.05
CHMP3-204ENST00000409727 LINC00588Q9Y4M8 146 aa8.49□□□□□ -1.05
CHMP3-204ENST00000409727 H3BRM9 83 aa8.47□□□□□ -1.05
CHMP3-204ENST00000409727 CCL25O15444 150 aa8.47□□□□□ -1.05
CHMP3-204ENST00000409727 CCL18P55774 89 aa8.47□□□□□ -1.05
CHMP3-204ENST00000409727 TSPEAR-AS2P59090 65 aa8.47□□□□□ -1.05
CHMP3-204ENST00000409727 SS18Q15532 418 aa8.47□□□□□ -1.05
CHMP3-204ENST00000409727 FAM19A3Q7Z5A8 133 aa8.47□□□□□ -1.05
CHMP3-204ENST00000409727 BOD1L2Q8IYS8 172 aa8.47□□□□□ -1.05
CHMP3-204ENST00000409727 SVIPQ8NHG7 77 aa8.47□□□□□ -1.05
CHMP3-204ENST00000409727 IGLV5-45A0A087WSX0 123 aa8.46□□□□□ -1.06
CHMP3-204ENST00000409727 CTAG1AP78358 180 aa8.46□□□□□ -1.06
CHMP3-204ENST00000409727 ZNF815PA8K554 130 aa8.45□□□□□ -1.06
CHMP3-204ENST00000409727 J3QQQ9 107 aa8.45□□□□□ -1.06
CHMP3-204ENST00000409727 LEPROTO15243 131 aa8.45□□□□□ -1.06
CHMP3-204ENST00000409727 LGALS3P17931 250 aaKnown RBP8.45□□□□□ -1.06
CHMP3-204ENST00000409727 C5orf38Q86SI9 138 aa8.45□□□□□ -1.06
CHMP3-204ENST00000409727 UBE2WQ96B02 151 aa8.45□□□□□ -1.06
CHMP3-204ENST00000409727 IGHV1-58A0A0C4DH39 117 aa8.45□□□□□ -1.06
CHMP3-204ENST00000409727 MYMXA0A1B0GTQ4 84 aa8.45□□□□□ -1.06
CHMP3-204ENST00000409727 CRPP02741 224 aa8.45□□□□□ -1.06
CHMP3-204ENST00000409727 NUPR2A6NF83 97 aa8.44□□□□□ -1.06
CHMP3-204ENST00000409727 ZFAND6Q6FIF0 208 aa8.44□□□□□ -1.06
CHMP3-204ENST00000409727 ENHOQ6UWT2 76 aa8.44□□□□□ -1.06
CHMP3-204ENST00000409727 C2orf91Q6ZV80 131 aa8.44□□□□□ -1.06
CHMP3-204ENST00000409727 CHCHD10Q8WYQ3 142 aaPredicted RBP8.44□□□□□ -1.06
CHMP3-204ENST00000409727 APLNQ9ULZ1 77 aa8.44□□□□□ -1.06
CHMP3-204ENST00000409727 MRPS16Q9Y3D3 137 aaKnown RBP8.44□□□□□ -1.06
CHMP3-204ENST00000409727 IGHV3OR16-9A0A0B4J2B5 98 aa8.43□□□□□ -1.06
CHMP3-204ENST00000409727 SMIM1B2RUZ4 78 aa8.43□□□□□ -1.06
CHMP3-204ENST00000409727 PLEKHB2Q96CS7 222 aa8.43□□□□□ -1.06
CHMP3-204ENST00000409727 SIVA1O15304 175 aa8.43□□□□□ -1.06
CHMP3-204ENST00000409727 DLEU1O43261 78 aa8.43□□□□□ -1.06
CHMP3-204ENST00000409727 LINC01556Q5JQF7 62 aa8.43□□□□□ -1.06
CHMP3-204ENST00000409727 PRR34Q9NV39 138 aa8.43□□□□□ -1.06
CHMP3-204ENST00000409727 KLK5Q9Y337 293 aaPredicted RBP8.43□□□□□ -1.06
CHMP3-204ENST00000409727 FBN3Q75N90 2809 aa8.42□□□□□ -1.06
CHMP3-204ENST00000409727 SCGB1D4Q6XE38 83 aa8.42□□□□□ -1.06
CHMP3-204ENST00000409727 UBE2DNLQ8IWF7 75 aa8.42□□□□□ -1.06
CHMP3-204ENST00000409727 BATFQ16520 125 aa8.41□□□□□ -1.06
CHMP3-204ENST00000409727 TOMM7Q9P0U1 55 aa8.41□□□□□ -1.06
CHMP3-204ENST00000409727 A0A087WZ39 114 aa8.4□□□□□ -1.06
CHMP3-204ENST00000409727 GAGE12HA6NDE8 117 aa8.4□□□□□ -1.06
CHMP3-204ENST00000409727 DNAH10OSP0CZ25 163 aa8.4□□□□□ -1.06
CHMP3-204ENST00000409727 CD164L2Q6UWJ8 174 aa8.4□□□□□ -1.06
CHMP3-204ENST00000409727 IGLV5-39A0A0G2JS06 123 aa8.4□□□□□ -1.07
CHMP3-204ENST00000409727 HINT1P49773 126 aaPredicted RBP8.39□□□□□ -1.07
CHMP3-204ENST00000409727 FOXI1Q12951 378 aa8.39□□□□□ -1.07
CHMP3-204ENST00000409727 Q9H8V8 135 aa8.39□□□□□ -1.07
CHMP3-204ENST00000409727 Q9HAA7 133 aa8.39□□□□□ -1.07
CHMP3-204ENST00000409727 NDUFA12Q9UI09 145 aa8.39□□□□□ -1.07
CHMP3-204ENST00000409727 COX7A2LO14548 114 aa8.38□□□□□ -1.07
CHMP3-204ENST00000409727 MALP21145 153 aa8.38□□□□□ -1.07
CHMP3-204ENST00000409727 UPK3BQ9BT76 320 aa8.38□□□□□ -1.07
CHMP3-204ENST00000409727 EREGO14944 169 aa8.38□□□□□ -1.07
CHMP3-204ENST00000409727 MIAQ16674 131 aa8.38□□□□□ -1.07
CHMP3-204ENST00000409727 C10orf126Q8N4M7 172 aa8.38□□□□□ -1.07
CHMP3-204ENST00000409727 COX7B2Q8TF08 81 aa8.38□□□□□ -1.07
CHMP3-204ENST00000409727 ZNF625Q96I27 306 aaPredicted RBP8.37□□□□□ -1.07
CHMP3-204ENST00000409727 SNHG12Q9BXW3 62 aa8.37□□□□□ -1.07
CHMP3-204ENST00000409727 CSMD3Q7Z407 3707 aa8.37□□□□□ -1.07
CHMP3-204ENST00000409727 IGKV2D-24A0A075B6R9 120 aa8.36□□□□□ -1.07
CHMP3-204ENST00000409727 TRAV8-4A0A0B4J246 113 aa8.36□□□□□ -1.07
CHMP3-204ENST00000409727 HIGD1BQ9P298 99 aa8.36□□□□□ -1.07
CHMP3-204ENST00000409727 M0R143 59 aa8.36□□□□□ -1.07
CHMP3-204ENST00000409727 ORAOV1Q8WV07 137 aa8.36□□□□□ -1.07
CHMP3-204ENST00000409727 C1orf43Q9BWL3 253 aa8.36□□□□□ -1.07
CHMP3-204ENST00000409727 A0A0J9YXY3 114 aa8.35□□□□□ -1.07
CHMP3-204ENST00000409727 A6NJY4 79 aa8.35□□□□□ -1.07
CHMP3-204ENST00000409727 MUC7Q8TAX7 377 aa8.35□□□□□ -1.07
CHMP3-204ENST00000409727 HIST1H4GQ99525 98 aa8.35□□□□□ -1.07
CHMP3-204ENST00000409727 NDUFA1O15239 70 aa8.34□□□□□ -1.07
CHMP3-204ENST00000409727 PRSS2P07478 247 aa8.34□□□□□ -1.07
CHMP3-204ENST00000409727 GCSHP23434 173 aa8.34□□□□□ -1.07
CHMP3-204ENST00000409727 C6orf226Q5I0X4 101 aa8.34□□□□□ -1.07
CHMP3-204ENST00000409727 TMEM238LA0A1B0GVL6 79 aa8.34□□□□□ -1.07
CHMP3-204ENST00000409727 IBA57-AS1B1ANH7 110 aa8.34□□□□□ -1.07
CHMP3-204ENST00000409727 HSD52Q0P140 79 aa8.34□□□□□ -1.07
CHMP3-204ENST00000409727 SRSF9Q13242 221 aaKnown RBP eCLIP8.34□□□□□ -1.07
CHMP3-204ENST00000409727 LYSTQ99698 3801 aa8.33□□□□□ -1.08
CHMP3-204ENST00000409727 A0A0U1RRA0 63 aa8.33□□□□□ -1.08
CHMP3-204ENST00000409727 BVES-AS1Q5T3Y7 98 aa8.33□□□□□ -1.08
CHMP3-204ENST00000409727 LINC00526Q96FQ7 95 aa8.33□□□□□ -1.08
CHMP3-204ENST00000409727 KRTAP26-1Q6PEX3 210 aa8.32□□□□□ -1.08
CHMP3-204ENST00000409727 C2orf82Q6UX34 121 aa8.32□□□□□ -1.08
CHMP3-204ENST00000409727 KRTAP1-5Q9BYS1 174 aa8.32□□□□□ -1.08
CHMP3-204ENST00000409727 APOMO95445 188 aa8.32□□□□□ -1.08
CHMP3-204ENST00000409727 MEIG1Q5JSS6 88 aa8.32□□□□□ -1.08
CHMP3-204ENST00000409727 LINC01561Q8N1V8 128 aa8.32□□□□□ -1.08
CHMP3-204ENST00000409727 K7EP13 123 aa8.31□□□□□ -1.08
CHMP3-204ENST00000409727 CKS1BP61024 79 aa8.31□□□□□ -1.08
CHMP3-204ENST00000409727 SPAG11BQ08648 103 aa8.31□□□□□ -1.08
CHMP3-204ENST00000409727 CFAP161Q6P656 301 aa8.31□□□□□ -1.08
CHMP3-204ENST00000409727 Q8IZM0 81 aa8.31□□□□□ -1.08
CHMP3-204ENST00000409727 DAND5Q8N907 189 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms