RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 XCL1P47992 114 aa11.01□□□□□ -0.65
TSPAN4-208ENST00000409531 TNP2Q05952 138 aa11.01□□□□□ -0.65
TSPAN4-208ENST00000409531 CD164L2Q6UWJ8 174 aa11.01□□□□□ -0.65
TSPAN4-208ENST00000409531 HIST1H2BLQ99880 126 aa11.01□□□□□ -0.65
TSPAN4-208ENST00000409531 FAT2Q9NYQ8 4349 aa11.01□□□□□ -0.65
TSPAN4-208ENST00000409531 DNAH17Q9UFH2 4485 aa11□□□□□ -0.65
TSPAN4-208ENST00000409531 H0Y8G0 127 aa11□□□□□ -0.65
TSPAN4-208ENST00000409531 HERVK_113P63121 156 aa11□□□□□ -0.65
TSPAN4-208ENST00000409531 LINC00242Q5T6M2 205 aa11□□□□□ -0.65
TSPAN4-208ENST00000409531 GEMIN7Q9H840 131 aaKnown RBP11□□□□□ -0.65
TSPAN4-208ENST00000409531 HECTD4Q9Y4D8 3996 aa11□□□□□ -0.65
TSPAN4-208ENST00000409531 TINCRA0A1B0GVN0 87 aa10.99□□□□□ -0.65
TSPAN4-208ENST00000409531 GAGE12HA6NDE8 117 aa10.99□□□□□ -0.65
TSPAN4-208ENST00000409531 SPATA12Q7Z6I5 190 aa10.99□□□□□ -0.65
TSPAN4-208ENST00000409531 CHTOPQ9Y3Y2 248 aaKnown RBP10.99□□□□□ -0.65
TSPAN4-208ENST00000409531 A0A0J9YXV3 536 aa10.98□□□□□ -0.65
TSPAN4-208ENST00000409531 SYS1-DBNDD2H3BUS1 97 aa10.98□□□□□ -0.65
TSPAN4-208ENST00000409531 KRTAP26-1Q6PEX3 210 aa10.98□□□□□ -0.65
TSPAN4-208ENST00000409531 PET117Q6UWS5 81 aa10.98□□□□□ -0.65
TSPAN4-208ENST00000409531 Q6ZRN7 208 aaPredicted RBP10.98□□□□□ -0.65
TSPAN4-208ENST00000409531 F8VRH5 84 aa10.97□□□□□ -0.65
TSPAN4-208ENST00000409531 C3orf79P0CE67 100 aa10.97□□□□□ -0.65
TSPAN4-208ENST00000409531 IGLC3P0DOY3 106 aa10.97□□□□□ -0.65
TSPAN4-208ENST00000409531 KRTDAPP60985 99 aa10.97□□□□□ -0.65
TSPAN4-208ENST00000409531 FOXI1Q12951 378 aa10.97□□□□□ -0.65
TSPAN4-208ENST00000409531 ODF1Q14990 250 aa10.97□□□□□ -0.65
TSPAN4-208ENST00000409531 IGHV3OR16-9A0A0B4J2B5 98 aa10.96□□□□□ -0.65
TSPAN4-208ENST00000409531 COX7A2LO14548 114 aa10.96□□□□□ -0.65
TSPAN4-208ENST00000409531 CHAC1Q9BUX1 264 aa10.96□□□□□ -0.65
TSPAN4-208ENST00000409531 IGLV4-69A0A075B6H9 119 aa10.95□□□□□ -0.66
TSPAN4-208ENST00000409531 MRPL35Q9NZE8 188 aaKnown RBP10.95□□□□□ -0.66
TSPAN4-208ENST00000409531 C20orf202A1L168 122 aa10.94□□□□□ -0.66
TSPAN4-208ENST00000409531 MALP21145 153 aa10.94□□□□□ -0.66
TSPAN4-208ENST00000409531 PLNP26678 52 aa10.94□□□□□ -0.66
TSPAN4-208ENST00000409531 COX6A2Q02221 97 aa10.94□□□□□ -0.66
TSPAN4-208ENST00000409531 CFAP161Q6P656 301 aa10.94□□□□□ -0.66
TSPAN4-208ENST00000409531 LINC00469Q8N7U9 141 aa10.94□□□□□ -0.66
TSPAN4-208ENST00000409531 IGLV5-45A0A087WSX0 123 aa10.93□□□□□ -0.66
TSPAN4-208ENST00000409531 A0A087WZ39 114 aa10.93□□□□□ -0.66
TSPAN4-208ENST00000409531 H3BRM9 83 aa10.93□□□□□ -0.66
TSPAN4-208ENST00000409531 APOMO95445 188 aa10.93□□□□□ -0.66
TSPAN4-208ENST00000409531 AKR1D1P51857 326 aa10.93□□□□□ -0.66
TSPAN4-208ENST00000409531 LINC01545Q5VT33 79 aa10.93□□□□□ -0.66
TSPAN4-208ENST00000409531 C5orf38Q86SI9 138 aa10.93□□□□□ -0.66
TSPAN4-208ENST00000409531 LINC01561Q8N1V8 128 aa10.93□□□□□ -0.66
TSPAN4-208ENST00000409531 DPM2O94777 84 aa10.92□□□□□ -0.66
TSPAN4-208ENST00000409531 MAPKAPK5-AS1Q8N8E1 139 aa10.92□□□□□ -0.66
TSPAN4-208ENST00000409531 CDKN2A-AS1Q9UH64 79 aa10.92□□□□□ -0.66
TSPAN4-208ENST00000409531 PKD1P98161 4303 aa10.91□□□□□ -0.66
TSPAN4-208ENST00000409531 C11orf86A6NJI1 115 aa10.91□□□□□ -0.66
TSPAN4-208ENST00000409531 C14orf177Q52M58 125 aa10.91□□□□□ -0.66
TSPAN4-208ENST00000409531 IGHV1-58A0A0C4DH39 117 aa10.9□□□□□ -0.66
TSPAN4-208ENST00000409531 IGKCP01834 107 aa10.9□□□□□ -0.66
TSPAN4-208ENST00000409531 ZNF22P17026 224 aaPredicted RBP10.9□□□□□ -0.66
TSPAN4-208ENST00000409531 TMEM170BQ5T4T1 132 aa10.9□□□□□ -0.66
TSPAN4-208ENST00000409531 OR10D4PQ8NGN7 298 aa10.9□□□□□ -0.66
TSPAN4-208ENST00000409531 PMCHL2Q9BQD1 86 aa10.9□□□□□ -0.66
TSPAN4-208ENST00000409531 USP17L23D6RBM5 183 aa10.89□□□□□ -0.67
TSPAN4-208ENST00000409531 EREGO14944 169 aa10.89□□□□□ -0.67
TSPAN4-208ENST00000409531 LRCOL1A6NCL2 159 aa10.88□□□□□ -0.67
TSPAN4-208ENST00000409531 PKHD1P08F94 4074 aa10.88□□□□□ -0.67
TSPAN4-208ENST00000409531 A0A087WTM6 91 aa10.87□□□□□ -0.67
TSPAN4-208ENST00000409531 IGHV3-64A0A075B6Q5 118 aa10.86□□□□□ -0.67
TSPAN4-208ENST00000409531 LECT2O14960 151 aa10.86□□□□□ -0.67
TSPAN4-208ENST00000409531 C15orf56Q8N910 161 aa10.86□□□□□ -0.67
TSPAN4-208ENST00000409531 GVQW2A0A096LPI5 108 aaPredicted RBP10.85□□□□□ -0.67
TSPAN4-208ENST00000409531 C16orf90A8MZG2 172 aa10.85□□□□□ -0.67
TSPAN4-208ENST00000409531 SMIM1B2RUZ4 78 aa10.85□□□□□ -0.67
TSPAN4-208ENST00000409531 ZNF561-AS1K7EIQ3 104 aa10.85□□□□□ -0.67
TSPAN4-208ENST00000409531 HERVK_113P61574 105 aa10.85□□□□□ -0.67
TSPAN4-208ENST00000409531 ORAOV1Q8WV07 137 aa10.85□□□□□ -0.67
TSPAN4-208ENST00000409531 ABCA13Q86UQ4 5058 aa10.85□□□□□ -0.67
TSPAN4-208ENST00000409531 SPINK8P0C7L1 97 aa10.84□□□□□ -0.67
TSPAN4-208ENST00000409531 hDV102S1A0JD36 115 aa10.84□□□□□ -0.67
TSPAN4-208ENST00000409531 TMEM223A0PJW6 202 aa10.84□□□□□ -0.67
TSPAN4-208ENST00000409531 SCGB1D1O95968 90 aa10.84□□□□□ -0.67
TSPAN4-208ENST00000409531 PRSS2P07478 247 aa10.84□□□□□ -0.67
TSPAN4-208ENST00000409531 KRTAP10-2P60368 255 aa10.84□□□□□ -0.67
TSPAN4-208ENST00000409531 SPAG11BQ08648 103 aa10.84□□□□□ -0.67
TSPAN4-208ENST00000409531 WFDC2Q14508 124 aa10.84□□□□□ -0.67
TSPAN4-208ENST00000409531 Q8N814 137 aa10.84□□□□□ -0.67
TSPAN4-208ENST00000409531 PGPEP1Q9NXJ5 209 aa10.84□□□□□ -0.67
TSPAN4-208ENST00000409531 HIGD2BQ4VC39 106 aa10.83□□□□□ -0.68
TSPAN4-208ENST00000409531 Q8IZM0 81 aa10.83□□□□□ -0.68
TSPAN4-208ENST00000409531 IGLV5-39A0A0G2JS06 123 aa10.82□□□□□ -0.68
TSPAN4-208ENST00000409531 F8WDY8 70 aa10.82□□□□□ -0.68
TSPAN4-208ENST00000409531 TOMM7Q9P0U1 55 aa10.82□□□□□ -0.68
TSPAN4-208ENST00000409531 C6orf226Q5I0X4 101 aa10.81□□□□□ -0.68
TSPAN4-208ENST00000409531 COX7B2Q8TF08 81 aa10.81□□□□□ -0.68
TSPAN4-208ENST00000409531 C2orf48Q96LS8 159 aa10.81□□□□□ -0.68
TSPAN4-208ENST00000409531 DNAH11Q96DT5 4516 aa10.8□□□□□ -0.68
TSPAN4-208ENST00000409531 CXCL5P42830 114 aa10.8□□□□□ -0.68
TSPAN4-208ENST00000409531 JOSD1Q15040 202 aaPredicted RBP10.8□□□□□ -0.68
TSPAN4-208ENST00000409531 NTN5Q8WTR8 489 aaPredicted RBP10.8□□□□□ -0.68
TSPAN4-208ENST00000409531 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.79□□□□□ -0.68
TSPAN4-208ENST00000409531 CKS1BP61024 79 aa10.79□□□□□ -0.68
TSPAN4-208ENST00000409531 ATOH7Q8N100 152 aa10.79□□□□□ -0.68
TSPAN4-208ENST00000409531 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.78□□□□□ -0.68
TSPAN4-208ENST00000409531 HSBP1L1C9JCN9 74 aa10.78□□□□□ -0.68
TSPAN4-208ENST00000409531 NDUFA1O15239 70 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms