RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 PIK3CD-AS1Q5SR53 167 aa11.12□□□□□ -0.63
LIMS2-205ENST00000409455 SOSTDC1Q6X4U4 206 aa11.12□□□□□ -0.63
LIMS2-205ENST00000409455 ZNF415Q09FC8 603 aa11.12□□□□□ -0.63
LIMS2-205ENST00000409455 TMEM89A2RUT3 159 aa11.11□□□□□ -0.63
LIMS2-205ENST00000409455 PRIMA1Q86XR5 153 aa11.11□□□□□ -0.63
LIMS2-205ENST00000409455 SORL1Q92673 2214 aa11.11□□□□□ -0.63
LIMS2-205ENST00000409455 J3KT08 172 aa11.11□□□□□ -0.63
LIMS2-205ENST00000409455 SYNJ2BPP57105 145 aa11.11□□□□□ -0.63
LIMS2-205ENST00000409455 MTORP42345 2549 aa11.1□□□□□ -0.63
LIMS2-205ENST00000409455 SMR3AQ99954 134 aa11.1□□□□□ -0.63
LIMS2-205ENST00000409455 IGHV3OR16-12A0A075B7B8 117 aa11.1□□□□□ -0.63
LIMS2-205ENST00000409455 ATOX1O00244 68 aa11.1□□□□□ -0.63
LIMS2-205ENST00000409455 IGHV3-53P01767 116 aa11.1□□□□□ -0.63
LIMS2-205ENST00000409455 LINC00242Q5T6M2 205 aa11.1□□□□□ -0.63
LIMS2-205ENST00000409455 TMEM86BQ8N661 226 aa11.1□□□□□ -0.63
LIMS2-205ENST00000409455 FAM218AQ96MZ4 157 aa11.1□□□□□ -0.63
LIMS2-205ENST00000409455 NACAE9PAV3 2078 aa11.1□□□□□ -0.63
LIMS2-205ENST00000409455 DNAJC9-AS1A6NH13 148 aa11.09□□□□□ -0.63
LIMS2-205ENST00000409455 ESM1Q9NQ30 184 aa11.09□□□□□ -0.63
LIMS2-205ENST00000409455 C22orf24Q9Y442 160 aa11.09□□□□□ -0.63
LIMS2-205ENST00000409455 CSDC2Q9Y534 153 aaKnown RBP11.09□□□□□ -0.63
LIMS2-205ENST00000409455 NF1P21359 2839 aa11.09□□□□□ -0.63
LIMS2-205ENST00000409455 SMIM1B2RUZ4 78 aa11.09□□□□□ -0.63
LIMS2-205ENST00000409455 KLK5Q9Y337 293 aaPredicted RBP11.09□□□□□ -0.63
LIMS2-205ENST00000409455 ANK3Q12955 4377 aaKnown RBP11.09□□□□□ -0.63
LIMS2-205ENST00000409455 LOC107984640A0A0U1RRK4 108 aa11.08□□□□□ -0.64
LIMS2-205ENST00000409455 A0A1B0GX51 115 aa11.08□□□□□ -0.64
LIMS2-205ENST00000409455 PRM2P04554 102 aa11.08□□□□□ -0.64
LIMS2-205ENST00000409455 MALP21145 153 aa11.08□□□□□ -0.64
LIMS2-205ENST00000409455 HIST2H2BDQ6DRA6 164 aa11.08□□□□□ -0.64
LIMS2-205ENST00000409455 CRYGAP11844 174 aa11.08□□□□□ -0.64
LIMS2-205ENST00000409455 DNAL4O96015 105 aa11.07□□□□□ -0.64
LIMS2-205ENST00000409455 Q9HAA7 133 aa11.07□□□□□ -0.64
LIMS2-205ENST00000409455 HIST1H4AP62805 103 aaKnown RBP11.07□□□□□ -0.64
LIMS2-205ENST00000409455 TRAV13-2A0A0B4J235 113 aa11.06□□□□□ -0.64
LIMS2-205ENST00000409455 PF4P02776 101 aa11.06□□□□□ -0.64
LIMS2-205ENST00000409455 UBE2E2Q96LR5 201 aa11.06□□□□□ -0.64
LIMS2-205ENST00000409455 TRAV13-1A0A0B4J241 112 aa11.06□□□□□ -0.64
LIMS2-205ENST00000409455 C2orf48Q96LS8 159 aa11.06□□□□□ -0.64
LIMS2-205ENST00000409455 OVOL2Q9BRP0 275 aa11.06□□□□□ -0.64
LIMS2-205ENST00000409455 OTOGQ6ZRI0 2925 aa11.05□□□□□ -0.64
LIMS2-205ENST00000409455 CRPP02741 224 aa11.05□□□□□ -0.64
LIMS2-205ENST00000409455 DEFB131AP59861 70 aa11.05□□□□□ -0.64
LIMS2-205ENST00000409455 FAM19A3Q7Z5A8 133 aa11.05□□□□□ -0.64
LIMS2-205ENST00000409455 RPL28P46779 137 aaKnown RBP11.04□□□□□ -0.64
LIMS2-205ENST00000409455 C18orf65Q6ZTR6 163 aa11.04□□□□□ -0.64
LIMS2-205ENST00000409455 HIVEP2P31629 2446 aa11.04□□□□□ -0.64
LIMS2-205ENST00000409455 HOXD3P31249 432 aaPredicted RBP11.04□□□□□ -0.64
LIMS2-205ENST00000409455 RPL18AQ02543 176 aaKnown RBP11.03□□□□□ -0.64
LIMS2-205ENST00000409455 FAM19A5Q7Z5A7 132 aaPredicted RBP11.02□□□□□ -0.64
LIMS2-205ENST00000409455 hADV29S1A0JD25 119 aa11.02□□□□□ -0.65
LIMS2-205ENST00000409455 RBMY1BA6NDE4 496 aaKnown RBP11.02□□□□□ -0.65
LIMS2-205ENST00000409455 RBMY1EA6NEQ0 496 aaKnown RBP11.02□□□□□ -0.65
LIMS2-205ENST00000409455 RS1O15537 224 aa11.02□□□□□ -0.65
LIMS2-205ENST00000409455 LY6G6DO95868 133 aa11.02□□□□□ -0.65
LIMS2-205ENST00000409455 RBMY1DP0C7P1 496 aaKnown RBP11.02□□□□□ -0.65
LIMS2-205ENST00000409455 DEFB136Q30KP8 78 aa11.02□□□□□ -0.65
LIMS2-205ENST00000409455 C5orf47Q569G3 176 aa11.02□□□□□ -0.65
LIMS2-205ENST00000409455 C11orf72Q8NBR9 251 aa11.02□□□□□ -0.65
LIMS2-205ENST00000409455 A8MTW9 85 aa11.01□□□□□ -0.65
LIMS2-205ENST00000409455 RPS28P62857 69 aaKnown RBP11.01□□□□□ -0.65
LIMS2-205ENST00000409455 F5H768 121 aa11.01□□□□□ -0.65
LIMS2-205ENST00000409455 C14orf132Q9NPU4 83 aa11□□□□□ -0.65
LIMS2-205ENST00000409455 KHDC1LQ5JSQ8 128 aa11□□□□□ -0.65
LIMS2-205ENST00000409455 SMIM9A6NGZ8 99 aa10.99□□□□□ -0.65
LIMS2-205ENST00000409455 LINC00337Q8N6G1 96 aa10.99□□□□□ -0.65
LIMS2-205ENST00000409455 SETD2Q9BYW2 2564 aaPredicted RBP10.99□□□□□ -0.65
LIMS2-205ENST00000409455 RNASE1P07998 156 aaKnown RBP10.99□□□□□ -0.65
LIMS2-205ENST00000409455 Q6JHZ5 121 aa10.99□□□□□ -0.65
LIMS2-205ENST00000409455 A0A087WYN8 130 aa10.98□□□□□ -0.65
LIMS2-205ENST00000409455 C11orf44Q8N8P7 122 aa10.98□□□□□ -0.65
LIMS2-205ENST00000409455 SND1-IT1Q9HBX3 110 aa10.98□□□□□ -0.65
LIMS2-205ENST00000409455 IGKV3D-7A0A0C4DH55 119 aa10.98□□□□□ -0.65
LIMS2-205ENST00000409455 INSP01308 110 aa10.98□□□□□ -0.65
LIMS2-205ENST00000409455 SLURP1P55000 103 aa10.98□□□□□ -0.65
LIMS2-205ENST00000409455 OR13C6PQ8NH95 151 aa10.98□□□□□ -0.65
LIMS2-205ENST00000409455 TMEM258P61165 79 aa10.97□□□□□ -0.65
LIMS2-205ENST00000409455 RPL36AP83881 106 aaKnown RBP10.97□□□□□ -0.65
LIMS2-205ENST00000409455 MIR7-3HGQ8N6C7 128 aa10.97□□□□□ -0.65
LIMS2-205ENST00000409455 RPL36ALQ969Q0 106 aaKnown RBP10.97□□□□□ -0.65
LIMS2-205ENST00000409455 CDC42SE2Q9NRR3 84 aa10.97□□□□□ -0.65
LIMS2-205ENST00000409455 HILS1P60008 231 aa10.97□□□□□ -0.65
LIMS2-205ENST00000409455 SERP2Q8N6R1 65 aa10.97□□□□□ -0.65
LIMS2-205ENST00000409455 C4orf3Q8WVX3 66 aa10.97□□□□□ -0.65
LIMS2-205ENST00000409455 IGKV2-28A0A075B6P5 120 aa10.96□□□□□ -0.65
LIMS2-205ENST00000409455 H0YGX0 51 aa10.96□□□□□ -0.65
LIMS2-205ENST00000409455 IGKV2D-28P01615 120 aa10.96□□□□□ -0.65
LIMS2-205ENST00000409455 LINC01006Q8NI28 216 aa10.96□□□□□ -0.65
LIMS2-205ENST00000409455 SMIM11BQ8TCY0 68 aa10.96□□□□□ -0.65
LIMS2-205ENST00000409455 LINC00846Q9NV44 126 aa10.96□□□□□ -0.65
LIMS2-205ENST00000409455 C9orf129Q5T035 196 aaKnown RBP10.95□□□□□ -0.66
LIMS2-205ENST00000409455 CYSTM1Q9H1C7 97 aa10.95□□□□□ -0.66
LIMS2-205ENST00000409455 OBSCN-AS1Q96MR7 158 aa10.95□□□□□ -0.66
LIMS2-205ENST00000409455 NTM-AS1Q6ZSK4 140 aa10.94□□□□□ -0.66
LIMS2-205ENST00000409455 FLNBO75369 2602 aaKnown RBP10.94□□□□□ -0.66
LIMS2-205ENST00000409455 TRBV10-1A0A0K0K1A3 114 aa10.94□□□□□ -0.66
LIMS2-205ENST00000409455 K7EQD1 137 aa10.94□□□□□ -0.66
LIMS2-205ENST00000409455 UBE2L6O14933 153 aa10.94□□□□□ -0.66
LIMS2-205ENST00000409455 COX7B2Q8TF08 81 aa10.94□□□□□ -0.66
LIMS2-205ENST00000409455 C16orf95Q9H693 158 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms