RNA–Protein interactions for RNA: ENST00000409248.8

C4orf48-201, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C4orf48, Length 433 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-201ENST00000409248 WFDC2Q14508 124 aa13.71□□□□□ -0.21
C4orf48-201ENST00000409248 ZC2HC1BQ5TFG8 222 aa13.71□□□□□ -0.21
C4orf48-201ENST00000409248 LINC00173Q6ZV60 143 aa13.71□□□□□ -0.21
C4orf48-201ENST00000409248 KRTAP26-1Q6PEX3 210 aa13.7□□□□□ -0.22
C4orf48-201ENST00000409248 LEPROTL1O95214 131 aa13.69□□□□□ -0.22
C4orf48-201ENST00000409248 PMVKQ15126 192 aa13.69□□□□□ -0.22
C4orf48-201ENST00000409248 C14orf177Q52M58 125 aa13.69□□□□□ -0.22
C4orf48-201ENST00000409248 CD164L2Q6UWJ8 174 aa13.69□□□□□ -0.22
C4orf48-201ENST00000409248 UBE2D1P51668 147 aa13.68□□□□□ -0.22
C4orf48-201ENST00000409248 IFI27L1Q96BM0 104 aa13.68□□□□□ -0.22
C4orf48-201ENST00000409248 HSPB8Q9UJY1 196 aa13.68□□□□□ -0.22
C4orf48-201ENST00000409248 GCSHP23434 173 aa13.67□□□□□ -0.22
C4orf48-201ENST00000409248 FOXI1Q12951 378 aa13.67□□□□□ -0.22
C4orf48-201ENST00000409248 CST9LQ9H4G1 147 aa13.67□□□□□ -0.22
C4orf48-201ENST00000409248 KIAA1109Q2LD37 5005 aa13.67□□□□□ -0.22
C4orf48-201ENST00000409248 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.65□□□□□ -0.22
C4orf48-201ENST00000409248 S100A6P06703 90 aa13.65□□□□□ -0.22
C4orf48-201ENST00000409248 PRSS1P07477 247 aa13.65□□□□□ -0.22
C4orf48-201ENST00000409248 FABP4P15090 132 aa13.65□□□□□ -0.22
C4orf48-201ENST00000409248 SEC11AP67812 179 aa13.65□□□□□ -0.22
C4orf48-201ENST00000409248 LINC00242Q5T6M2 205 aa13.65□□□□□ -0.22
C4orf48-201ENST00000409248 PACRGQ96M98 296 aaPredicted RBP13.64□□□□□ -0.23
C4orf48-201ENST00000409248 USP17L23D6RBM5 183 aa13.63□□□□□ -0.23
C4orf48-201ENST00000409248 COX7A2LO14548 114 aa13.63□□□□□ -0.23
C4orf48-201ENST00000409248 FAM19A3Q7Z5A8 133 aa13.63□□□□□ -0.23
C4orf48-201ENST00000409248 KRTAP10-1P60331 282 aa13.62□□□□□ -0.23
C4orf48-201ENST00000409248 HERVK_113P63121 156 aa13.62□□□□□ -0.23
C4orf48-201ENST00000409248 CFAP161Q6P656 301 aa13.62□□□□□ -0.23
C4orf48-201ENST00000409248 GEMIN7Q9H840 131 aaKnown RBP13.62□□□□□ -0.23
C4orf48-201ENST00000409248 LRP1BQ9NZR2 4599 aa13.62□□□□□ -0.23
C4orf48-201ENST00000409248 A0A0J9YXV3 536 aa13.61□□□□□ -0.23
C4orf48-201ENST00000409248 MALP21145 153 aa13.61□□□□□ -0.23
C4orf48-201ENST00000409248 HERC2O95714 4834 aa13.61□□□□□ -0.23
C4orf48-201ENST00000409248 DNAH5Q8TE73 4624 aa13.6□□□□□ -0.23
C4orf48-201ENST00000409248 TRAV12-1A0A0B4J245 112 aa13.6□□□□□ -0.23
C4orf48-201ENST00000409248 IGHV3OR16-9A0A0B4J2B5 98 aa13.6□□□□□ -0.23
C4orf48-201ENST00000409248 TINCRA0A1B0GVN0 87 aa13.6□□□□□ -0.23
C4orf48-201ENST00000409248 C5orf38Q86SI9 138 aa13.6□□□□□ -0.23
C4orf48-201ENST00000409248 COX6A2Q02221 97 aa13.59□□□□□ -0.23
C4orf48-201ENST00000409248 MAP1LC3CQ9BXW4 147 aa13.59□□□□□ -0.23
C4orf48-201ENST00000409248 IGHV1-58A0A0C4DH39 117 aa13.58□□□□□ -0.24
C4orf48-201ENST00000409248 H0Y8G0 127 aa13.58□□□□□ -0.24
C4orf48-201ENST00000409248 CHTOPQ9Y3Y2 248 aaKnown RBP13.58□□□□□ -0.24
C4orf48-201ENST00000409248 APOMO95445 188 aa13.57□□□□□ -0.24
C4orf48-201ENST00000409248 IGLC3P0DOY3 106 aa13.57□□□□□ -0.24
C4orf48-201ENST00000409248 S100A2P29034 98 aa13.57□□□□□ -0.24
C4orf48-201ENST00000409248 LINC00469Q8N7U9 141 aa13.57□□□□□ -0.24
C4orf48-201ENST00000409248 A0A087WZ39 114 aa13.56□□□□□ -0.24
C4orf48-201ENST00000409248 C15orf56Q8N910 161 aa13.56□□□□□ -0.24
C4orf48-201ENST00000409248 CHAC1Q9BUX1 264 aa13.56□□□□□ -0.24
C4orf48-201ENST00000409248 IGLV4-69A0A075B6H9 119 aa13.55□□□□□ -0.24
C4orf48-201ENST00000409248 LINC01561Q8N1V8 128 aa13.55□□□□□ -0.24
C4orf48-201ENST00000409248 HIST3H2BBQ8N257 126 aa13.55□□□□□ -0.24
C4orf48-201ENST00000409248 RYR1P21817 5038 aa13.55□□□□□ -0.24
C4orf48-201ENST00000409248 IGLV5-45A0A087WSX0 123 aa13.54□□□□□ -0.24
C4orf48-201ENST00000409248 hDV102S1A0JD36 115 aa13.54□□□□□ -0.24
C4orf48-201ENST00000409248 F8VRH5 84 aa13.54□□□□□ -0.24
C4orf48-201ENST00000409248 CDKN2A-AS1Q9UH64 79 aa13.54□□□□□ -0.24
C4orf48-201ENST00000409248 GVQW2A0A096LPI5 108 aaPredicted RBP13.53□□□□□ -0.24
C4orf48-201ENST00000409248 SNRPEP62304 92 aaKnown RBP13.53□□□□□ -0.24
C4orf48-201ENST00000409248 ODF1Q14990 250 aa13.53□□□□□ -0.24
C4orf48-201ENST00000409248 HIGD2BQ4VC39 106 aa13.53□□□□□ -0.24
C4orf48-201ENST00000409248 MRPL35Q9NZE8 188 aaKnown RBP13.53□□□□□ -0.24
C4orf48-201ENST00000409248 H3BRM9 83 aa13.52□□□□□ -0.25
C4orf48-201ENST00000409248 IGHV3-64A0A075B6Q5 118 aa13.51□□□□□ -0.25
C4orf48-201ENST00000409248 C11orf86A6NJI1 115 aa13.51□□□□□ -0.25
C4orf48-201ENST00000409248 SYS1-DBNDD2H3BUS1 97 aa13.51□□□□□ -0.25
C4orf48-201ENST00000409248 OR10D4PQ8NGN7 298 aa13.51□□□□□ -0.25
C4orf48-201ENST00000409248 ORAOV1Q8WV07 137 aa13.51□□□□□ -0.25
C4orf48-201ENST00000409248 C5orf52A6NGY3 159 aa13.5□□□□□ -0.25
C4orf48-201ENST00000409248 ZNF561-AS1K7EIQ3 104 aa13.5□□□□□ -0.25
C4orf48-201ENST00000409248 ZNF22P17026 224 aaPredicted RBP13.5□□□□□ -0.25
C4orf48-201ENST00000409248 HIST1H2BLQ99880 126 aa13.5□□□□□ -0.25
C4orf48-201ENST00000409248 APOBP04114 4563 aaKnown RBP13.5□□□□□ -0.25
C4orf48-201ENST00000409248 XGP55808 180 aa13.49□□□□□ -0.25
C4orf48-201ENST00000409248 KRTDAPP60985 99 aa13.49□□□□□ -0.25
C4orf48-201ENST00000409248 SPAG11BQ08648 103 aa13.49□□□□□ -0.25
C4orf48-201ENST00000409248 LINC01620Q4KN68 170 aa13.49□□□□□ -0.25
C4orf48-201ENST00000409248 TMEM170BQ5T4T1 132 aa13.49□□□□□ -0.25
C4orf48-201ENST00000409248 PET117Q6UWS5 81 aa13.49□□□□□ -0.25
C4orf48-201ENST00000409248 TMA7Q9Y2S6 64 aaKnown RBP13.49□□□□□ -0.25
C4orf48-201ENST00000409248 HSPG2P98160 4391 aa13.48□□□□□ -0.25
C4orf48-201ENST00000409248 C3orf79P0CE67 100 aa13.48□□□□□ -0.25
C4orf48-201ENST00000409248 PLNP26678 52 aa13.48□□□□□ -0.25
C4orf48-201ENST00000409248 Q6ZSA8 131 aa13.48□□□□□ -0.25
C4orf48-201ENST00000409248 Q8N1X5 172 aa13.48□□□□□ -0.25
C4orf48-201ENST00000409248 CNBPP62633 177 aaKnown RBP13.47□□□□□ -0.25
C4orf48-201ENST00000409248 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.46□□□□□ -0.25
C4orf48-201ENST00000409248 SMIM1B2RUZ4 78 aa13.46□□□□□ -0.25
C4orf48-201ENST00000409248 DPM2O94777 84 aa13.46□□□□□ -0.25
C4orf48-201ENST00000409248 SPINK8P0C7L1 97 aa13.46□□□□□ -0.25
C4orf48-201ENST00000409248 PMCHL2Q9BQD1 86 aa13.46□□□□□ -0.25
C4orf48-201ENST00000409248 PRSS2P07478 247 aa13.45□□□□□ -0.26
C4orf48-201ENST00000409248 LINC00526Q96FQ7 95 aa13.45□□□□□ -0.26
C4orf48-201ENST00000409248 FAM30AQ9NZY2 134 aa13.45□□□□□ -0.26
C4orf48-201ENST00000409248 C20orf202A1L168 122 aa13.44□□□□□ -0.26
C4orf48-201ENST00000409248 IGKCP01834 107 aa13.44□□□□□ -0.26
C4orf48-201ENST00000409248 LINC01545Q5VT33 79 aa13.44□□□□□ -0.26
C4orf48-201ENST00000409248 C9orf163Q8N9P6 203 aa13.44□□□□□ -0.26
C4orf48-201ENST00000409248 C2orf48Q96LS8 159 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms