RNA–Protein interactions for RNA: ENST00000409047.2

TUBA3D-202, Transcript of tubulin alpha 3d, humanhuman

TSL 2

Gene TUBA3D, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-202ENST00000409047 A0A087X002 238 aa7.7□□□□□ -1.18
TUBA3D-202ENST00000409047 TSPAN13O95857 204 aa7.7□□□□□ -1.18
TUBA3D-202ENST00000409047 TAGLN2P37802 199 aaKnown RBP7.7□□□□□ -1.18
TUBA3D-202ENST00000409047 RPL39P62891 51 aaKnown RBP7.7□□□□□ -1.18
TUBA3D-202ENST00000409047 TMEM241Q24JQ0 296 aa7.7□□□□□ -1.18
TUBA3D-202ENST00000409047 BATF3Q9NR55 127 aa7.7□□□□□ -1.18
TUBA3D-202ENST00000409047 TMEM250H0YL14 139 aa7.69□□□□□ -1.18
TUBA3D-202ENST00000409047 ZNF861PO60384 105 aa7.69□□□□□ -1.18
TUBA3D-202ENST00000409047 UBE2BP63146 152 aa7.68□□□□□ -1.18
TUBA3D-202ENST00000409047 SMAGPQ0VAQ4 97 aa7.68□□□□□ -1.18
TUBA3D-202ENST00000409047 KIR2DL4Q99706 377 aa7.68□□□□□ -1.18
TUBA3D-202ENST00000409047 LINC01551Q86U37 167 aa7.67□□□□□ -1.18
TUBA3D-202ENST00000409047 BORCS7Q96B45 105 aa7.67□□□□□ -1.18
TUBA3D-202ENST00000409047 RPL32P62910 135 aaKnown RBP7.66□□□□□ -1.18
TUBA3D-202ENST00000409047 MRPS36P82909 103 aaKnown RBP7.66□□□□□ -1.18
TUBA3D-202ENST00000409047 MRPL51Q4U2R6 128 aaKnown RBP7.66□□□□□ -1.18
TUBA3D-202ENST00000409047 C2orf82Q6UX34 121 aa7.66□□□□□ -1.18
TUBA3D-202ENST00000409047 TRBV24-1A0A075B6N3 115 aa7.65□□□□□ -1.18
TUBA3D-202ENST00000409047 NDUFC2-KCTD14E9PQ53 114 aa7.65□□□□□ -1.18
TUBA3D-202ENST00000409047 PPP1R2P9O14990 202 aa7.65□□□□□ -1.18
TUBA3D-202ENST00000409047 PPP1R17O96001 155 aa7.65□□□□□ -1.18
TUBA3D-202ENST00000409047 OSTCQ9NRP0 149 aa7.65□□□□□ -1.18
TUBA3D-202ENST00000409047 V9GYV3 84 aa7.65□□□□□ -1.18
TUBA3D-202ENST00000409047 TRBV30A0A0K0K1B3 111 aa7.64□□□□□ -1.19
TUBA3D-202ENST00000409047 LINC00242Q5T6M2 205 aa7.64□□□□□ -1.19
TUBA3D-202ENST00000409047 FAM104BQ5XKR9 115 aa7.64□□□□□ -1.19
TUBA3D-202ENST00000409047 SLC51BQ86UW2 128 aa7.64□□□□□ -1.19
TUBA3D-202ENST00000409047 TMEM18Q96B42 140 aa7.64□□□□□ -1.19
TUBA3D-202ENST00000409047 C20orf78Q9BR46 151 aa7.64□□□□□ -1.19
TUBA3D-202ENST00000409047 SPANXA1Q9NS26 97 aa7.64□□□□□ -1.19
TUBA3D-202ENST00000409047 IFITM10A6NMD0 228 aa7.63□□□□□ -1.19
TUBA3D-202ENST00000409047 HBBP68871 147 aa7.63□□□□□ -1.19
TUBA3D-202ENST00000409047 RIGQ13278 110 aa7.63□□□□□ -1.19
TUBA3D-202ENST00000409047 C22orf24Q9Y442 160 aa7.63□□□□□ -1.19
TUBA3D-202ENST00000409047 NUPR1O60356 82 aa7.62□□□□□ -1.19
TUBA3D-202ENST00000409047 KRTAP13-2Q52LG2 175 aa7.62□□□□□ -1.19
TUBA3D-202ENST00000409047 RETNLBQ9BQ08 111 aa7.62□□□□□ -1.19
TUBA3D-202ENST00000409047 SMIM2Q9BVW6 85 aa7.62□□□□□ -1.19
TUBA3D-202ENST00000409047 CTDSP1Q9GZU7 261 aa7.62□□□□□ -1.19
TUBA3D-202ENST00000409047 LINC00862A6NCI5 91 aa7.61□□□□□ -1.19
TUBA3D-202ENST00000409047 TNFRSF6BO95407 300 aa7.61□□□□□ -1.19
TUBA3D-202ENST00000409047 CEBPGP53567 150 aa7.61□□□□□ -1.19
TUBA3D-202ENST00000409047 SMIM7Q9BQ49 75 aa7.61□□□□□ -1.19
TUBA3D-202ENST00000409047 ANAPC11Q9NYG5 84 aa7.61□□□□□ -1.19
TUBA3D-202ENST00000409047 TGIF2-C20orf24A0A0A6YYL0 155 aa7.6□□□□□ -1.19
TUBA3D-202ENST00000409047 TCAPO15273 167 aa7.6□□□□□ -1.19
TUBA3D-202ENST00000409047 TYMSOSQ8TAI1 123 aa7.6□□□□□ -1.19
TUBA3D-202ENST00000409047 IGLV4-3A0A075B6K6 122 aa7.59□□□□□ -1.19
TUBA3D-202ENST00000409047 ZNF727A8MUV8 499 aa7.59□□□□□ -1.19
TUBA3D-202ENST00000409047 NPYP01303 97 aa7.59□□□□□ -1.19
TUBA3D-202ENST00000409047 CRYGAP11844 174 aa7.59□□□□□ -1.19
TUBA3D-202ENST00000409047 TPRXLQ17RH7 258 aa7.59□□□□□ -1.19
TUBA3D-202ENST00000409047 LINC00469Q8N7U9 141 aa7.59□□□□□ -1.19
TUBA3D-202ENST00000409047 CKS2P33552 79 aa7.58□□□□□ -1.2
TUBA3D-202ENST00000409047 TCTE3Q8IZS6 198 aa7.58□□□□□ -1.2
TUBA3D-202ENST00000409047 PACRGQ96M98 296 aaPredicted RBP7.58□□□□□ -1.2
TUBA3D-202ENST00000409047 XAGE1AQ9HD64 81 aa7.58□□□□□ -1.2
TUBA3D-202ENST00000409047 NAT8BQ9UHF3 227 aa7.58□□□□□ -1.2
TUBA3D-202ENST00000409047 SMIM27A0A1W2PRY6 76 aa7.57□□□□□ -1.2
TUBA3D-202ENST00000409047 D6R8Y8 96 aa7.57□□□□□ -1.2
TUBA3D-202ENST00000409047 BCE1O60756 84 aa7.57□□□□□ -1.2
TUBA3D-202ENST00000409047 SRP19P09132 144 aaKnown RBP7.57□□□□□ -1.2
TUBA3D-202ENST00000409047 FAM74A3Q4VXF1 159 aa7.57□□□□□ -1.2
TUBA3D-202ENST00000409047 LINC00173Q6ZV60 143 aa7.57□□□□□ -1.2
TUBA3D-202ENST00000409047 KRTAP13-1Q8IUC0 172 aa7.57□□□□□ -1.2
TUBA3D-202ENST00000409047 LINC01561Q8N1V8 128 aa7.57□□□□□ -1.2
TUBA3D-202ENST00000409047 PYGO1Q9Y3Y4 419 aa7.57□□□□□ -1.2
TUBA3D-202ENST00000409047 ZC2HC1BQ5TFG8 222 aa7.56□□□□□ -1.2
TUBA3D-202ENST00000409047 ALKAL2Q6UX46 152 aa7.56□□□□□ -1.2
TUBA3D-202ENST00000409047 TP73-AS1Q9UF72 201 aa7.56□□□□□ -1.2
TUBA3D-202ENST00000409047 RPL28P46779 137 aaKnown RBP7.55□□□□□ -1.2
TUBA3D-202ENST00000409047 RPL23P62829 140 aaKnown RBP7.55□□□□□ -1.2
TUBA3D-202ENST00000409047 BLOC1S1P78537 153 aa7.55□□□□□ -1.2
TUBA3D-202ENST00000409047 LCE2DQ5TA82 110 aaPredicted RBP7.55□□□□□ -1.2
TUBA3D-202ENST00000409047 MRPL55Q7Z7F7 128 aaKnown RBP7.55□□□□□ -1.2
TUBA3D-202ENST00000409047 A0A1B0GXF2 115 aa7.54□□□□□ -1.2
TUBA3D-202ENST00000409047 IFI27P40305 119 aaPredicted RBP7.54□□□□□ -1.2
TUBA3D-202ENST00000409047 LBHQ53QV2 105 aaPredicted RBP7.54□□□□□ -1.2
TUBA3D-202ENST00000409047 TMEM141Q96I45 108 aa7.54□□□□□ -1.2
TUBA3D-202ENST00000409047 EIF5A2Q9GZV4 153 aaKnown RBP7.54□□□□□ -1.2
TUBA3D-202ENST00000409047 CDIP1Q9H305 208 aa7.54□□□□□ -1.2
TUBA3D-202ENST00000409047 LINC00167Q96N53 147 aa7.53□□□□□ -1.2
TUBA3D-202ENST00000409047 AMELXQ99217 191 aa7.53□□□□□ -1.2
TUBA3D-202ENST00000409047 FSIP2Q5CZC0 6907 aa7.53□□□□□ -1.2
TUBA3D-202ENST00000409047 IGLV7-46A0A075B6I9 117 aa7.52□□□□□ -1.21
TUBA3D-202ENST00000409047 RPL37AP8A6NKH3 93 aa7.52□□□□□ -1.21
TUBA3D-202ENST00000409047 Q8IZM0 81 aa7.52□□□□□ -1.21
TUBA3D-202ENST00000409047 LINC00304Q8N9R0 145 aa7.52□□□□□ -1.21
TUBA3D-202ENST00000409047 A0A1B0GW15 77 aa7.51□□□□□ -1.21
TUBA3D-202ENST00000409047 C9JQL5 133 aa7.51□□□□□ -1.21
TUBA3D-202ENST00000409047 FAM229BQ4G0N7 80 aa7.51□□□□□ -1.21
TUBA3D-202ENST00000409047 MRPL54Q6P161 138 aaKnown RBP7.51□□□□□ -1.21
TUBA3D-202ENST00000409047 Q6ZN92 141 aa7.51□□□□□ -1.21
TUBA3D-202ENST00000409047 TEX43Q6ZNM6 134 aa7.51□□□□□ -1.21
TUBA3D-202ENST00000409047 FAM19A3Q7Z5A8 133 aa7.51□□□□□ -1.21
TUBA3D-202ENST00000409047 TOMM7Q9P0U1 55 aa7.51□□□□□ -1.21
TUBA3D-202ENST00000409047 PRSS47A8MTI9 375 aa7.5□□□□□ -1.21
TUBA3D-202ENST00000409047 CKS1BP61024 79 aa7.5□□□□□ -1.21
TUBA3D-202ENST00000409047 KRTAP4-1Q9BYQ7 146 aa7.5□□□□□ -1.21
TUBA3D-202ENST00000409047 PPBPP02775 128 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms