RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 VCYO14598 125 aa6.8□□□□□ -1.32
TSPAN9-202ENST00000407263 TMEM136Q6ZRR5 245 aa6.8□□□□□ -1.32
TSPAN9-202ENST00000407263 C20orf78Q9BR46 151 aa6.8□□□□□ -1.32
TSPAN9-202ENST00000407263 IGLV5-52A0A0A0MRZ9 124 aa6.79□□□□□ -1.32
TSPAN9-202ENST00000407263 LOC389332A0A1B0GUA5 103 aa6.79□□□□□ -1.32
TSPAN9-202ENST00000407263 H7C423 109 aa6.79□□□□□ -1.32
TSPAN9-202ENST00000407263 J3QR89 54 aa6.79□□□□□ -1.32
TSPAN9-202ENST00000407263 KIAA1644Q3SXP7 199 aa6.79□□□□□ -1.32
TSPAN9-202ENST00000407263 C4orf48Q5BLP8 95 aa6.79□□□□□ -1.32
TSPAN9-202ENST00000407263 RNASE13Q5GAN3 156 aaKnown RBP6.79□□□□□ -1.32
TSPAN9-202ENST00000407263 HIST3H2BBQ8N257 126 aa6.79□□□□□ -1.32
TSPAN9-202ENST00000407263 OR5A1Q8NGJ0 315 aa6.79□□□□□ -1.32
TSPAN9-202ENST00000407263 TMEM101Q96IK0 257 aa6.79□□□□□ -1.32
TSPAN9-202ENST00000407263 ERG28Q9UKR5 140 aa6.79□□□□□ -1.32
TSPAN9-202ENST00000407263 RPL39P62891 51 aaKnown RBP6.78□□□□□ -1.32
TSPAN9-202ENST00000407263 MAP1LC3AQ9H492 121 aa6.78□□□□□ -1.32
TSPAN9-202ENST00000407263 DNAH5Q8TE73 4624 aa6.78□□□□□ -1.32
TSPAN9-202ENST00000407263 USP17L23D6RBM5 183 aa6.77□□□□□ -1.33
TSPAN9-202ENST00000407263 RPL24P83731 157 aaKnown RBP6.77□□□□□ -1.33
TSPAN9-202ENST00000407263 KRTAP26-1Q6PEX3 210 aa6.77□□□□□ -1.33
TSPAN9-202ENST00000407263 Q6ZUT4 128 aa6.77□□□□□ -1.33
TSPAN9-202ENST00000407263 UBE2D4Q9Y2X8 147 aa6.77□□□□□ -1.33
TSPAN9-202ENST00000407263 GAGE12HA6NDE8 117 aa6.76□□□□□ -1.33
TSPAN9-202ENST00000407263 IFITM10A6NMD0 228 aa6.76□□□□□ -1.33
TSPAN9-202ENST00000407263 KRTAP10-1P60331 282 aa6.76□□□□□ -1.33
TSPAN9-202ENST00000407263 GTF2H5Q6ZYL4 71 aa6.76□□□□□ -1.33
TSPAN9-202ENST00000407263 NTN5Q8WTR8 489 aaPredicted RBP6.76□□□□□ -1.33
TSPAN9-202ENST00000407263 LAMTOR2Q9Y2Q5 125 aa6.76□□□□□ -1.33
TSPAN9-202ENST00000407263 TRAV8-4A0A0B4J246 113 aa6.75□□□□□ -1.33
TSPAN9-202ENST00000407263 NDUFA6P56556 154 aa6.75□□□□□ -1.33
TSPAN9-202ENST00000407263 LINC01620Q4KN68 170 aa6.75□□□□□ -1.33
TSPAN9-202ENST00000407263 CHCHD10Q8WYQ3 142 aaPredicted RBP6.75□□□□□ -1.33
TSPAN9-202ENST00000407263 TMEM18Q96B42 140 aa6.75□□□□□ -1.33
TSPAN9-202ENST00000407263 MRPL18Q9H0U6 180 aaKnown RBP6.75□□□□□ -1.33
TSPAN9-202ENST00000407263 GCSHP23434 173 aa6.74□□□□□ -1.33
TSPAN9-202ENST00000407263 XCL1P47992 114 aa6.74□□□□□ -1.33
TSPAN9-202ENST00000407263 HAMPP81172 84 aa6.74□□□□□ -1.33
TSPAN9-202ENST00000407263 COA6Q5JTJ3 125 aaKnown RBP6.74□□□□□ -1.33
TSPAN9-202ENST00000407263 Q8N8P6 123 aa6.74□□□□□ -1.33
TSPAN9-202ENST00000407263 GNB1LQ9BYB4 327 aa6.74□□□□□ -1.33
TSPAN9-202ENST00000407263 CDC42SE2Q9NRR3 84 aa6.74□□□□□ -1.33
TSPAN9-202ENST00000407263 KIAA1109Q2LD37 5005 aa6.73□□□□□ -1.33
TSPAN9-202ENST00000407263 LRP1BQ9NZR2 4599 aa6.73□□□□□ -1.33
TSPAN9-202ENST00000407263 LINC00959A0A1B0GUT2 108 aa6.73□□□□□ -1.33
TSPAN9-202ENST00000407263 MT-ND6P03923 174 aa6.73□□□□□ -1.33
TSPAN9-202ENST00000407263 TRGC2P03986 189 aa6.73□□□□□ -1.33
TSPAN9-202ENST00000407263 IFI27P40305 119 aaPredicted RBP6.73□□□□□ -1.33
TSPAN9-202ENST00000407263 SMAGPQ0VAQ4 97 aa6.73□□□□□ -1.33
TSPAN9-202ENST00000407263 PMVKQ15126 192 aa6.73□□□□□ -1.33
TSPAN9-202ENST00000407263 C14orf177Q52M58 125 aa6.73□□□□□ -1.33
TSPAN9-202ENST00000407263 OPRPNQ99935 248 aaPredicted RBP6.73□□□□□ -1.33
TSPAN9-202ENST00000407263 TRAV13-1A0A0B4J241 112 aa6.72□□□□□ -1.33
TSPAN9-202ENST00000407263 HIST1H2BKO60814 126 aa6.72□□□□□ -1.33
TSPAN9-202ENST00000407263 HIST1H2BJP06899 126 aa6.72□□□□□ -1.33
TSPAN9-202ENST00000407263 PRSS1P07477 247 aa6.72□□□□□ -1.33
TSPAN9-202ENST00000407263 HIST1H2BOP23527 126 aa6.72□□□□□ -1.33
TSPAN9-202ENST00000407263 HIST1H2BBP33778 126 aa6.72□□□□□ -1.33
TSPAN9-202ENST00000407263 HIST1H2BDP58876 126 aa6.72□□□□□ -1.33
TSPAN9-202ENST00000407263 HIST1H2BCP62807 126 aa6.72□□□□□ -1.33
TSPAN9-202ENST00000407263 HIST2H2BEQ16778 126 aa6.72□□□□□ -1.33
TSPAN9-202ENST00000407263 HIGD2BQ4VC39 106 aa6.72□□□□□ -1.33
TSPAN9-202ENST00000407263 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.72□□□□□ -1.33
TSPAN9-202ENST00000407263 C15orf56Q8N910 161 aa6.72□□□□□ -1.33
TSPAN9-202ENST00000407263 HIST1H2BHQ93079 126 aa6.72□□□□□ -1.33
TSPAN9-202ENST00000407263 HIST1H2BNQ99877 126 aa6.72□□□□□ -1.33
TSPAN9-202ENST00000407263 HIST1H2BMQ99879 126 aa6.72□□□□□ -1.33
TSPAN9-202ENST00000407263 TIMM21Q9BVV7 248 aa6.72□□□□□ -1.33
TSPAN9-202ENST00000407263 hDV102S1A0JD36 115 aa6.71□□□□□ -1.34
TSPAN9-202ENST00000407263 CDK2AP2O75956 126 aa6.71□□□□□ -1.34
TSPAN9-202ENST00000407263 FABP4P15090 132 aa6.71□□□□□ -1.34
TSPAN9-202ENST00000407263 MALP21145 153 aa6.71□□□□□ -1.34
TSPAN9-202ENST00000407263 FOXI1Q12951 378 aa6.71□□□□□ -1.34
TSPAN9-202ENST00000407263 SS18Q15532 418 aa6.71□□□□□ -1.34
TSPAN9-202ENST00000407263 C2orf66Q6UXQ4 117 aa6.71□□□□□ -1.34
TSPAN9-202ENST00000407263 NXT2Q9NPJ8 142 aaKnown RBP6.71□□□□□ -1.34
TSPAN9-202ENST00000407263 TRAPPC1Q9Y5R8 145 aa6.71□□□□□ -1.34
TSPAN9-202ENST00000407263 APOBP04114 4563 aaKnown RBP6.71□□□□□ -1.34
TSPAN9-202ENST00000407263 HSD52Q0P140 79 aa6.7□□□□□ -1.34
TSPAN9-202ENST00000407263 ORMDL2Q53FV1 153 aa6.7□□□□□ -1.34
TSPAN9-202ENST00000407263 FAM104AQ969W3 186 aa6.7□□□□□ -1.34
TSPAN9-202ENST00000407263 HIST1H2BLQ99880 126 aa6.7□□□□□ -1.34
TSPAN9-202ENST00000407263 PPDPFQ9H3Y8 114 aa6.7□□□□□ -1.34
TSPAN9-202ENST00000407263 CYSLTR1Q9Y271 337 aa6.7□□□□□ -1.34
TSPAN9-202ENST00000407263 IGLV4-3A0A075B6K6 122 aa6.69□□□□□ -1.34
TSPAN9-202ENST00000407263 TINCRA0A1B0GVN0 87 aa6.69□□□□□ -1.34
TSPAN9-202ENST00000407263 VPREB1P12018 145 aa6.69□□□□□ -1.34
TSPAN9-202ENST00000407263 PRSS3P2Q8NHM4 247 aa6.69□□□□□ -1.34
TSPAN9-202ENST00000407263 PRO0628Q9UI54 55 aa6.69□□□□□ -1.34
TSPAN9-202ENST00000407263 HERC2O95714 4834 aa6.68□□□□□ -1.34
TSPAN9-202ENST00000407263 A0A1B0GX51 115 aa6.68□□□□□ -1.34
TSPAN9-202ENST00000407263 RPS28P62857 69 aaKnown RBP6.68□□□□□ -1.34
TSPAN9-202ENST00000407263 MRPS36P82909 103 aaKnown RBP6.68□□□□□ -1.34
TSPAN9-202ENST00000407263 LCE2DQ5TA82 110 aaPredicted RBP6.68□□□□□ -1.34
TSPAN9-202ENST00000407263 ZC2HC1BQ5TFG8 222 aa6.68□□□□□ -1.34
TSPAN9-202ENST00000407263 CD164L2Q6UWJ8 174 aa6.68□□□□□ -1.34
TSPAN9-202ENST00000407263 LINC00526Q96FQ7 95 aa6.68□□□□□ -1.34
TSPAN9-202ENST00000407263 TMEM141Q96I45 108 aa6.68□□□□□ -1.34
TSPAN9-202ENST00000407263 AP5S1Q9NUS5 200 aa6.68□□□□□ -1.34
TSPAN9-202ENST00000407263 FAM30AQ9NZY2 134 aa6.68□□□□□ -1.34
TSPAN9-202ENST00000407263 HSPG2P98160 4391 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms